RNA–Protein interactions for RNA: ENST00000452226.5

PDLIM2-214, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-214ENST00000452226 COBLL1Q53SF7 1204 aa19.65■□□□□ 0.74
PDLIM2-214ENST00000452226 HEATR6Q6AI08 1181 aaKnown RBP19.65■□□□□ 0.74
PDLIM2-214ENST00000452226 CCDC127Q96BQ5 260 aa19.65■□□□□ 0.74
PDLIM2-214ENST00000452226 CGRRF1Q99675 332 aa19.65■□□□□ 0.74
PDLIM2-214ENST00000452226 CRTAC1Q9NQ79 661 aa19.65■□□□□ 0.74
PDLIM2-214ENST00000452226 RMND1Q9NWS8 449 aa19.65■□□□□ 0.74
PDLIM2-214ENST00000452226 MAPK8IP1Q9UQF2 711 aa19.65■□□□□ 0.74
PDLIM2-214ENST00000452226 SPAG17Q6Q759 2223 aa19.65■□□□□ 0.74
PDLIM2-214ENST00000452226 DNAH14Q0VDD8 3507 aa19.64■□□□□ 0.73
PDLIM2-214ENST00000452226 TRAV19A0A0A6YYK7 116 aa19.64■□□□□ 0.73
PDLIM2-214ENST00000452226 CALUO43852 315 aaPredicted RBP19.64■□□□□ 0.73
PDLIM2-214ENST00000452226 SMC2O95347 1197 aa19.64■□□□□ 0.73
PDLIM2-214ENST00000452226 CST3P01034 146 aaPredicted RBP19.64■□□□□ 0.73
PDLIM2-214ENST00000452226 CKMP06732 381 aa19.64■□□□□ 0.73
PDLIM2-214ENST00000452226 ARSAP15289 507 aa19.64■□□□□ 0.73
PDLIM2-214ENST00000452226 BDNFP23560 247 aa19.64■□□□□ 0.73
PDLIM2-214ENST00000452226 CLDN10P78369 228 aa19.64■□□□□ 0.73
PDLIM2-214ENST00000452226 MAPRE1Q15691 268 aaKnown RBP19.64■□□□□ 0.73
PDLIM2-214ENST00000452226 ZCWPW2Q504Y3 356 aa19.64■□□□□ 0.73
PDLIM2-214ENST00000452226 LAIR1Q6GTX8 287 aa19.64■□□□□ 0.73
PDLIM2-214ENST00000452226 VSTM1Q6UX27 236 aa19.64■□□□□ 0.73
PDLIM2-214ENST00000452226 PRR23BQ6ZRT6 265 aa19.64■□□□□ 0.73
PDLIM2-214ENST00000452226 TTC16Q8NEE8 873 aa19.64■□□□□ 0.73
PDLIM2-214ENST00000452226 PLEKHO2Q8TD55 490 aa19.64■□□□□ 0.73
PDLIM2-214ENST00000452226 PARD3BQ8TEW8 1205 aa19.64■□□□□ 0.73
PDLIM2-214ENST00000452226 MYLPFQ96A32 169 aa19.64■□□□□ 0.73
PDLIM2-214ENST00000452226 SLC22A12Q96S37 553 aa19.64■□□□□ 0.73
PDLIM2-214ENST00000452226 CYP2S1Q96SQ9 504 aa19.64■□□□□ 0.73
PDLIM2-214ENST00000452226 SNX25Q9H3E2 840 aa19.64■□□□□ 0.73
PDLIM2-214ENST00000452226 HOOK1Q9UJC3 728 aaKnown RBP19.64■□□□□ 0.73
PDLIM2-214ENST00000452226 HELZP42694 1942 aaKnown RBP19.63■□□□□ 0.73
PDLIM2-214ENST00000452226 HRO43593 1189 aa19.63■□□□□ 0.73
PDLIM2-214ENST00000452226 USP17L7P0C7H9 530 aa19.63■□□□□ 0.73
PDLIM2-214ENST00000452226 GRIK1P39086 918 aa19.63■□□□□ 0.73
PDLIM2-214ENST00000452226 CASP4P49662 377 aa19.63■□□□□ 0.73
PDLIM2-214ENST00000452226 UBE2HP62256 183 aa19.63■□□□□ 0.73
PDLIM2-214ENST00000452226 AMPD2Q01433 879 aa19.63■□□□□ 0.73
PDLIM2-214ENST00000452226 CYP27A1Q02318 531 aa19.63■□□□□ 0.73
PDLIM2-214ENST00000452226 GRSF1Q12849 480 aaKnown RBP eCLIP19.63■□□□□ 0.73
PDLIM2-214ENST00000452226 PDGFRLQ15198 375 aa19.63■□□□□ 0.73
PDLIM2-214ENST00000452226 TMEM196Q5HYL7 178 aa19.63■□□□□ 0.73
PDLIM2-214ENST00000452226 ZNF658Q5TYW1 1059 aaPredicted RBP19.63■□□□□ 0.73
PDLIM2-214ENST00000452226 CLEC17AQ6ZS10 378 aa19.63■□□□□ 0.73
PDLIM2-214ENST00000452226 LONP2Q86WA8 852 aa19.63■□□□□ 0.73
PDLIM2-214ENST00000452226 SMYD4Q8IYR2 804 aaPredicted RBP19.63■□□□□ 0.73
PDLIM2-214ENST00000452226 ZNF516Q92618 1163 aa19.63■□□□□ 0.73
PDLIM2-214ENST00000452226 ERCC4Q92889 916 aaPredicted RBP19.63■□□□□ 0.73
PDLIM2-214ENST00000452226 SMARCE1Q969G3 411 aa19.63■□□□□ 0.73
PDLIM2-214ENST00000452226 CHFRQ96EP1 664 aa19.63■□□□□ 0.73
PDLIM2-214ENST00000452226 SPATA17Q96L03 361 aa19.63■□□□□ 0.73
PDLIM2-214ENST00000452226 MRPL45Q9BRJ2 306 aaKnown RBP19.63■□□□□ 0.73
PDLIM2-214ENST00000452226 NCOR2Q9Y618 2525 aa19.63■□□□□ 0.73
PDLIM2-214ENST00000452226 C2orf78A6NCI8 922 aa19.62■□□□□ 0.73
PDLIM2-214ENST00000452226 TRDMT1O14717 391 aaKnown RBP19.62■□□□□ 0.73
PDLIM2-214ENST00000452226 MAPK13O15264 365 aa19.62■□□□□ 0.73
PDLIM2-214ENST00000452226 TGM1P22735 817 aa19.62■□□□□ 0.73
PDLIM2-214ENST00000452226 GNL1P36915 607 aaPredicted RBP19.62■□□□□ 0.73
PDLIM2-214ENST00000452226 SRSF5Q13243 272 aaKnown RBP19.62■□□□□ 0.73
PDLIM2-214ENST00000452226 SIM2Q14190 667 aaPredicted RBP19.62■□□□□ 0.73
PDLIM2-214ENST00000452226 MTF1Q14872 753 aa19.62■□□□□ 0.73
PDLIM2-214ENST00000452226 ZNF77Q15935 545 aa19.62■□□□□ 0.73
PDLIM2-214ENST00000452226 FSTL4Q6MZW2 842 aa19.62■□□□□ 0.73
PDLIM2-214ENST00000452226 ARL14EPQ8N8R7 260 aaPredicted RBP19.62■□□□□ 0.73
PDLIM2-214ENST00000452226 MYCBPAPQ8TBZ2 947 aa19.62■□□□□ 0.73
PDLIM2-214ENST00000452226 PCED1BQ96HM7 432 aa19.62■□□□□ 0.73
PDLIM2-214ENST00000452226 RTKNQ9BST9 563 aa19.62■□□□□ 0.73
PDLIM2-214ENST00000452226 GTPBP4Q9BZE4 634 aaKnown RBP19.62■□□□□ 0.73
PDLIM2-214ENST00000452226 PARD6AQ9NPB6 346 aa19.62■□□□□ 0.73
PDLIM2-214ENST00000452226 GCNT4Q9P109 453 aa19.62■□□□□ 0.73
PDLIM2-214ENST00000452226 TACC1O75410 805 aa19.61■□□□□ 0.73
PDLIM2-214ENST00000452226 ANXA13P27216 316 aa19.61■□□□□ 0.73
PDLIM2-214ENST00000452226 HOXA6P31267 233 aa19.61■□□□□ 0.73
PDLIM2-214ENST00000452226 HOXC13P31276 330 aa19.61■□□□□ 0.73
PDLIM2-214ENST00000452226 CNR2P34972 360 aa19.61■□□□□ 0.73
PDLIM2-214ENST00000452226 PRCPP42785 496 aa19.61■□□□□ 0.73
PDLIM2-214ENST00000452226 MCCD1P59942 119 aaPredicted RBP19.61■□□□□ 0.73
PDLIM2-214ENST00000452226 TNNC1P63316 161 aa19.61■□□□□ 0.73
PDLIM2-214ENST00000452226 USP4Q13107 963 aa19.61■□□□□ 0.73
PDLIM2-214ENST00000452226 TRPC3Q13507 836 aa19.61■□□□□ 0.73
PDLIM2-214ENST00000452226 WDR72Q3MJ13 1102 aa19.61■□□□□ 0.73
PDLIM2-214ENST00000452226 MDH1BQ5I0G3 518 aa19.61■□□□□ 0.73
PDLIM2-214ENST00000452226 PKN3Q6P5Z2 889 aa19.61■□□□□ 0.73
PDLIM2-214ENST00000452226 CPA6Q8N4T0 437 aa19.61■□□□□ 0.73
PDLIM2-214ENST00000452226 OR6B3Q8NGW1 331 aa19.61■□□□□ 0.73
PDLIM2-214ENST00000452226 OSCP1Q8WVF1 389 aa19.61■□□□□ 0.73
PDLIM2-214ENST00000452226 CEP295NLQ96MC4 621 aa19.61■□□□□ 0.73
PDLIM2-214ENST00000452226 DUS2Q9NX74 493 aaKnown RBP19.61■□□□□ 0.73
PDLIM2-214ENST00000452226 LRRIQ3A6PVS8 624 aaPredicted RBP19.6■□□□□ 0.73
PDLIM2-214ENST00000452226 TRIM66O15016 1216 aa19.6■□□□□ 0.73
PDLIM2-214ENST00000452226 RETP07949 1114 aa19.6■□□□□ 0.73
PDLIM2-214ENST00000452226 FAM163BP0C2L3 166 aa19.6■□□□□ 0.73
PDLIM2-214ENST00000452226 HDCP19113 662 aa19.6■□□□□ 0.73
PDLIM2-214ENST00000452226 NR2F2P24468 414 aa19.6■□□□□ 0.73
PDLIM2-214ENST00000452226 IFNAR2P48551 515 aa19.6■□□□□ 0.73
PDLIM2-214ENST00000452226 GALK1P51570 392 aa19.6■□□□□ 0.73
PDLIM2-214ENST00000452226 AP3M2P53677 418 aa19.6■□□□□ 0.73
PDLIM2-214ENST00000452226 ATXN1P54253 815 aaKnown RBP19.6■□□□□ 0.73
PDLIM2-214ENST00000452226 MYL6P60660 151 aa19.6■□□□□ 0.73
PDLIM2-214ENST00000452226 SPEM2Q0P670 501 aa19.6■□□□□ 0.73
PDLIM2-214ENST00000452226 EDRF1Q3B7T1 1238 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms