RNA–Protein interactions for RNA: ENST00000451964.5

CSNK1E-211, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 873 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-211ENST00000451964 KRT39Q6A163 491 aa13.13□□□□□ -0.31
CSNK1E-211ENST00000451964 TXNDC11Q6PKC3 985 aa13.13□□□□□ -0.31
CSNK1E-211ENST00000451964 FAM35AQ86V20 835 aa13.13□□□□□ -0.31
CSNK1E-211ENST00000451964 C1orf210Q8IVY1 113 aa13.13□□□□□ -0.31
CSNK1E-211ENST00000451964 ARL14EPQ8N8R7 260 aaPredicted RBP13.13□□□□□ -0.31
CSNK1E-211ENST00000451964 C12orf29Q8N999 325 aa13.13□□□□□ -0.31
CSNK1E-211ENST00000451964 WHAMMQ8TF30 809 aa13.13□□□□□ -0.31
CSNK1E-211ENST00000451964 FAM3CQ92520 227 aa13.13□□□□□ -0.31
CSNK1E-211ENST00000451964 FAM83CQ9BQN1 747 aa13.13□□□□□ -0.31
CSNK1E-211ENST00000451964 ELOVL4Q9GZR5 314 aa13.13□□□□□ -0.31
CSNK1E-211ENST00000451964 TRPC7Q9HCX4 862 aa13.13□□□□□ -0.31
CSNK1E-211ENST00000451964 GKN1Q9NS71 199 aa13.13□□□□□ -0.31
CSNK1E-211ENST00000451964 CHMP5Q9NZZ3 219 aa13.13□□□□□ -0.31
CSNK1E-211ENST00000451964 HOOK1Q9UJC3 728 aaKnown RBP13.13□□□□□ -0.31
CSNK1E-211ENST00000451964 NDRG2Q9UN36 371 aaKnown RBP13.13□□□□□ -0.31
CSNK1E-211ENST00000451964 ZNF840PA6NDX5 716 aa13.12□□□□□ -0.31
CSNK1E-211ENST00000451964 OTOL1A6NHN0 477 aaPredicted RBP13.12□□□□□ -0.31
CSNK1E-211ENST00000451964 TNFRSF10BO14763 440 aa13.12□□□□□ -0.31
CSNK1E-211ENST00000451964 BEST1O76090 585 aa13.12□□□□□ -0.31
CSNK1E-211ENST00000451964 EPB41P11171 864 aaKnown RBP13.12□□□□□ -0.31
CSNK1E-211ENST00000451964 CCDC130P13994 396 aa13.12□□□□□ -0.31
CSNK1E-211ENST00000451964 NBL1P41271 181 aa13.12□□□□□ -0.31
CSNK1E-211ENST00000451964 MLLT6P55198 1093 aaPredicted RBP13.12□□□□□ -0.31
CSNK1E-211ENST00000451964 ZXDBP98169 803 aa13.12□□□□□ -0.31
CSNK1E-211ENST00000451964 INCA1Q0VD86 236 aa13.12□□□□□ -0.31
CSNK1E-211ENST00000451964 TAF10Q12962 218 aa13.12□□□□□ -0.31
CSNK1E-211ENST00000451964 MORC3Q14149 939 aa13.12□□□□□ -0.31
CSNK1E-211ENST00000451964 ZNF268Q14587 947 aaPredicted RBP13.12□□□□□ -0.31
CSNK1E-211ENST00000451964 CBWD6Q4V339 395 aa13.12□□□□□ -0.31
CSNK1E-211ENST00000451964 CBWD3Q5JTY5 395 aa13.12□□□□□ -0.31
CSNK1E-211ENST00000451964 CBWD5Q5RIA9 395 aa13.12□□□□□ -0.31
CSNK1E-211ENST00000451964 TRIM68Q6AZZ1 485 aa13.12□□□□□ -0.31
CSNK1E-211ENST00000451964 FRMD5Q7Z6J6 570 aa13.12□□□□□ -0.31
CSNK1E-211ENST00000451964 UNC93AQ86WB7 457 aa13.12□□□□□ -0.31
CSNK1E-211ENST00000451964 ZMIZ2Q8NF64 920 aa13.12□□□□□ -0.31
CSNK1E-211ENST00000451964 SLC2A14Q8TDB8 520 aa13.12□□□□□ -0.31
CSNK1E-211ENST00000451964 CSGALNACT1Q8TDX6 532 aa13.12□□□□□ -0.31
CSNK1E-211ENST00000451964 DHTKD1Q96HY7 919 aaPredicted RBP13.12□□□□□ -0.31
CSNK1E-211ENST00000451964 TNIP3Q96KP6 325 aa13.12□□□□□ -0.31
CSNK1E-211ENST00000451964 TSG101Q99816 390 aa13.12□□□□□ -0.31
CSNK1E-211ENST00000451964 SMOQ99835 787 aa13.12□□□□□ -0.31
CSNK1E-211ENST00000451964 DUSP9Q99956 384 aaKnown RBP13.12□□□□□ -0.31
CSNK1E-211ENST00000451964 NIF3L1Q9GZT8 377 aa13.12□□□□□ -0.31
CSNK1E-211ENST00000451964 CYP3A43Q9HB55 503 aa13.12□□□□□ -0.31
CSNK1E-211ENST00000451964 HPS4Q9NQG7 708 aa13.12□□□□□ -0.31
CSNK1E-211ENST00000451964 MRPS17Q9Y2R5 130 aaKnown RBP13.12□□□□□ -0.31
CSNK1E-211ENST00000451964 VPS13AQ96RL7 3174 aa13.12□□□□□ -0.31
CSNK1E-211ENST00000451964 TRAV19A0A0A6YYK7 116 aa13.11□□□□□ -0.31
CSNK1E-211ENST00000451964 PROB1E7EW31 1015 aa13.11□□□□□ -0.31
CSNK1E-211ENST00000451964 SPECC1L-ADORA2AF8WAN1 911 aa13.11□□□□□ -0.31
CSNK1E-211ENST00000451964 BIN1O00499 593 aa13.11□□□□□ -0.31
CSNK1E-211ENST00000451964 SLC16A3O15427 465 aaKnown RBP13.11□□□□□ -0.31
CSNK1E-211ENST00000451964 USP17L7P0C7H9 530 aa13.11□□□□□ -0.31
CSNK1E-211ENST00000451964 CHRNB1P11230 501 aa13.11□□□□□ -0.31
CSNK1E-211ENST00000451964 HDCP19113 662 aa13.11□□□□□ -0.31
CSNK1E-211ENST00000451964 CD58P19256 250 aa13.11□□□□□ -0.31
CSNK1E-211ENST00000451964 RPS9P46781 194 aaKnown RBP13.11□□□□□ -0.31
CSNK1E-211ENST00000451964 MXI1P50539 228 aa13.11□□□□□ -0.31
CSNK1E-211ENST00000451964 KPNA1P52294 538 aaPredicted RBP13.11□□□□□ -0.31
CSNK1E-211ENST00000451964 PLCB2Q00722 1185 aa13.11□□□□□ -0.31
CSNK1E-211ENST00000451964 LRRC63Q05C16 580 aa13.11□□□□□ -0.31
CSNK1E-211ENST00000451964 NUP93Q8N1F7 819 aa13.11□□□□□ -0.31
CSNK1E-211ENST00000451964 SCAMP5Q8TAC9 235 aa13.11□□□□□ -0.31
CSNK1E-211ENST00000451964 TATDN2Q93075 761 aa13.11□□□□□ -0.31
CSNK1E-211ENST00000451964 CHFRQ96EP1 664 aa13.11□□□□□ -0.31
CSNK1E-211ENST00000451964 MED10Q9BTT4 135 aa13.11□□□□□ -0.31
CSNK1E-211ENST00000451964 GTPBP4Q9BZE4 634 aaKnown RBP13.11□□□□□ -0.31
CSNK1E-211ENST00000451964 RNF38Q9H0F5 515 aa13.11□□□□□ -0.31
CSNK1E-211ENST00000451964 C8orf33Q9H7E9 229 aaPredicted RBP13.11□□□□□ -0.31
CSNK1E-211ENST00000451964 KIF9Q9HAQ2 790 aa13.11□□□□□ -0.31
CSNK1E-211ENST00000451964 LMAN1LQ9HAT1 526 aa13.11□□□□□ -0.31
CSNK1E-211ENST00000451964 FAM49BQ9NUQ9 324 aa13.11□□□□□ -0.31
CSNK1E-211ENST00000451964 SPATA6Q9NWH7 488 aaPredicted RBP13.11□□□□□ -0.31
CSNK1E-211ENST00000451964 THG1LQ9NWX6 298 aaKnown RBP13.11□□□□□ -0.31
CSNK1E-211ENST00000451964 RAB20Q9NX57 234 aa13.11□□□□□ -0.31
CSNK1E-211ENST00000451964 IL37Q9NZH6 218 aa13.11□□□□□ -0.31
CSNK1E-211ENST00000451964 TRPM5Q9NZQ8 1165 aa13.11□□□□□ -0.31
CSNK1E-211ENST00000451964 PSMA7O14818 248 aa13.1□□□□□ -0.31
CSNK1E-211ENST00000451964 NCAM2O15394 837 aa13.1□□□□□ -0.31
CSNK1E-211ENST00000451964 CILPO75339 1184 aa13.1□□□□□ -0.31
CSNK1E-211ENST00000451964 AP1G2O75843 785 aa13.1□□□□□ -0.31
CSNK1E-211ENST00000451964 CKMP06732 381 aa13.1□□□□□ -0.31
CSNK1E-211ENST00000451964 SP9P0CG40 484 aa13.1□□□□□ -0.31
CSNK1E-211ENST00000451964 ARSAP15289 507 aa13.1□□□□□ -0.31
CSNK1E-211ENST00000451964 CTHP32929 405 aa13.1□□□□□ -0.31
CSNK1E-211ENST00000451964 UBE2HP62256 183 aa13.1□□□□□ -0.31
CSNK1E-211ENST00000451964 IFRD2Q12894 506 aaPredicted RBP13.1□□□□□ -0.31
CSNK1E-211ENST00000451964 MTAPQ13126 283 aa13.1□□□□□ -0.31
CSNK1E-211ENST00000451964 GAS6Q14393 721 aa13.1□□□□□ -0.31
CSNK1E-211ENST00000451964 ZNF77Q15935 545 aa13.1□□□□□ -0.31
CSNK1E-211ENST00000451964 DCAF17Q5H9S7 520 aaPredicted RBP13.1□□□□□ -0.31
CSNK1E-211ENST00000451964 KLHL10Q6JEL2 608 aa13.1□□□□□ -0.31
CSNK1E-211ENST00000451964 TTI2Q6NXR4 508 aa13.1□□□□□ -0.31
CSNK1E-211ENST00000451964 RALGPS2Q86X27 583 aaPredicted RBP13.1□□□□□ -0.31
CSNK1E-211ENST00000451964 FBXL13Q8NEE6 735 aa13.1□□□□□ -0.31
CSNK1E-211ENST00000451964 SH3RF2Q8TEC5 729 aa13.1□□□□□ -0.31
CSNK1E-211ENST00000451964 SLC35C1Q96A29 364 aa13.1□□□□□ -0.31
CSNK1E-211ENST00000451964 SMARCD1Q96GM5 515 aa13.1□□□□□ -0.31
CSNK1E-211ENST00000451964 ARID3AQ99856 593 aa13.1□□□□□ -0.31
CSNK1E-211ENST00000451964 NT5C1AQ9BXI3 368 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms