RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 CNGA3Q16281 694 aa14.51□□□□□ -0.09
RAPGEF3-205ENST00000449771 TIGD7Q6NT04 549 aaPredicted RBP14.51□□□□□ -0.09
RAPGEF3-205ENST00000449771 COPS7BQ9H9Q2 264 aaPredicted RBP14.51□□□□□ -0.09
RAPGEF3-205ENST00000449771 PXMP2Q9NR77 195 aa14.51□□□□□ -0.09
RAPGEF3-205ENST00000449771 UTP6Q9NYH9 597 aaKnown RBP14.51□□□□□ -0.09
RAPGEF3-205ENST00000449771 PNPLA6Q8IY17 1366 aa14.51□□□□□ -0.09
RAPGEF3-205ENST00000449771 CDC42BPAQ5VT25 1732 aa14.51□□□□□ -0.09
RAPGEF3-205ENST00000449771 TRIM16O95361 564 aa14.51□□□□□ -0.09
RAPGEF3-205ENST00000449771 ARP10275 920 aa14.51□□□□□ -0.09
RAPGEF3-205ENST00000449771 FAM83EQ2M2I3 478 aa14.51□□□□□ -0.09
RAPGEF3-205ENST00000449771 DNAL1Q4LDG9 190 aa14.51□□□□□ -0.09
RAPGEF3-205ENST00000449771 INTS5Q6P9B9 1019 aaKnown RBP14.51□□□□□ -0.09
RAPGEF3-205ENST00000449771 CHMP1BQ7LBR1 199 aa14.51□□□□□ -0.09
RAPGEF3-205ENST00000449771 ETAA1Q9NY74 926 aa14.51□□□□□ -0.09
RAPGEF3-205ENST00000449771 EVPLLA8MZ36 301 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 UBXN8O00124 270 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 RAD51CO43502 376 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 MYL4P12829 197 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 RFX3P48380 749 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 KHDRBS2Q5VWX1 349 aaKnown RBP14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 USP49Q70CQ1 688 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 ZDHHC15Q96MV8 337 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 PNKPQ96T60 521 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 NFKBIZQ9BYH8 718 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 IRX2Q9BZI1 471 aaPredicted RBP14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 VPS33BQ9H267 617 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 VPS28Q9UK41 221 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 ABCA6Q8N139 1617 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 SGPL1O95470 568 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 TGM2P21980 687 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 MDH1P40925 334 aaKnown RBP14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 KLC1Q07866 573 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 CAMK2GQ13555 558 aaPredicted RBP14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 PNMA8BQ9ULN7 279 aaPredicted RBP14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 SLC12A8A0AV02 714 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 NCF1BA6NI72 391 aaPredicted RBP14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 NCF1CA8MVU1 366 aaPredicted RBP14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 NCF1P14598 390 aaPredicted RBP14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 FAXCQ5TGI0 409 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 MRNIPQ6NTE8 343 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 LVRNQ6Q4G3 990 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 PLEKHM3Q6ZWE6 761 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 FOXP3Q9BZS1 431 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 MTFR1LQ9H019 292 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 KCTD10Q9H3F6 313 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 AAR2Q9Y312 384 aaKnown RBP14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 PPP2R3BQ9Y5P8 575 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 CASTOR2A6NHX0 329 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 KLHL2O95198 593 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 GSNP06396 782 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 CHI3L2Q15782 390 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 ZNF284Q2VY69 593 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 ZNF280DQ6N043 979 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 LRRC8BQ6P9F7 803 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 CCDC33Q8N5R6 958 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 TBKBP1A7MCY6 615 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 KPNA6O60684 536 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 MED24O75448 989 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 RHOCP08134 193 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 WEE1P30291 646 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 COILP38432 576 aaPredicted RBP14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 CTCFP49711 727 aaPredicted RBP14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 CDC16Q13042 620 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 ANKS6Q68DC2 871 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 SLFN11Q7Z7L1 901 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 BBS7Q8IWZ6 715 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 RIN2Q8WYP3 895 aaPredicted RBP14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 CMTM5Q96DZ9 223 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 SGF29Q96ES7 293 aa14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 PAWRQ96IZ0 340 aaKnown RBP14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 CELF4Q9BZC1 486 aaKnown RBP14.5□□□□□ -0.09
RAPGEF3-205ENST00000449771 PDHXO00330 501 aa14.49□□□□□ -0.09
RAPGEF3-205ENST00000449771 PSTPIP1O43586 416 aa14.49□□□□□ -0.09
RAPGEF3-205ENST00000449771 GYS1P13807 737 aa14.49□□□□□ -0.09
RAPGEF3-205ENST00000449771 DARSP14868 501 aaKnown RBP14.49□□□□□ -0.09
RAPGEF3-205ENST00000449771 LHX1P48742 406 aa14.49□□□□□ -0.09
RAPGEF3-205ENST00000449771 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.49□□□□□ -0.09
RAPGEF3-205ENST00000449771 NDEL1Q9GZM8 345 aa14.49□□□□□ -0.09
RAPGEF3-205ENST00000449771 THAP2Q9H0W7 228 aa14.49□□□□□ -0.09
RAPGEF3-205ENST00000449771 CNTN1Q12860 1018 aa14.49□□□□□ -0.09
RAPGEF3-205ENST00000449771 DDX39BQ13838 428 aaKnown RBP14.49□□□□□ -0.09
RAPGEF3-205ENST00000449771 PCNX4Q63HM2 1172 aa14.49□□□□□ -0.09
RAPGEF3-205ENST00000449771 PHACTR4Q8IZ21 702 aa14.49□□□□□ -0.09
RAPGEF3-205ENST00000449771 OR2W6PQ8NHA6 318 aa14.49□□□□□ -0.09
RAPGEF3-205ENST00000449771 EIF3LQ9Y262 564 aaKnown RBP14.49□□□□□ -0.09
RAPGEF3-205ENST00000449771 V9GYQ6 96 aa14.49□□□□□ -0.09
RAPGEF3-205ENST00000449771 NKRFO15226 690 aaKnown RBP eCLIP14.49□□□□□ -0.09
RAPGEF3-205ENST00000449771 CYTH3O43739 400 aa14.49□□□□□ -0.09
RAPGEF3-205ENST00000449771 RPLP2P05387 115 aaKnown RBP14.49□□□□□ -0.09
RAPGEF3-205ENST00000449771 KCNJ1P48048 391 aa14.49□□□□□ -0.09
RAPGEF3-205ENST00000449771 NBPF12Q5TAG4 269 aaPredicted RBP14.49□□□□□ -0.09
RAPGEF3-205ENST00000449771 DEPDC1Q5TB30 811 aa14.49□□□□□ -0.09
RAPGEF3-205ENST00000449771 LAYNQ6UX15 382 aa14.49□□□□□ -0.09
RAPGEF3-205ENST00000449771 ZNF473Q8WTR7 871 aaKnown RBP14.49□□□□□ -0.09
RAPGEF3-205ENST00000449771 NMRK1Q9NWW6 199 aa14.49□□□□□ -0.09
RAPGEF3-205ENST00000449771 MYO3AQ8NEV4 1616 aa14.49□□□□□ -0.09
RAPGEF3-205ENST00000449771 F8W810 466 aa14.49□□□□□ -0.09
RAPGEF3-205ENST00000449771 SERPINB10P48595 397 aa14.49□□□□□ -0.09
RAPGEF3-205ENST00000449771 GEMIN4P57678 1058 aaKnown RBP14.49□□□□□ -0.09
RAPGEF3-205ENST00000449771 RHOAP61586 193 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms