RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 MYO1AQ9UBC5 1043 aa15.45■□□□□ 0.06
TNF-208ENST00000449264 CHORDC1Q9UHD1 332 aaPredicted RBP15.45■□□□□ 0.06
TNF-208ENST00000449264 SSX2IPQ9Y2D8 614 aa15.45■□□□□ 0.06
TNF-208ENST00000449264 TRANK1O15050 2925 aa15.45■□□□□ 0.06
TNF-208ENST00000449264 ATG2AQ2TAZ0 1938 aa15.45■□□□□ 0.06
TNF-208ENST00000449264 PLXNA3P51805 1871 aa15.45■□□□□ 0.06
TNF-208ENST00000449264 MYO16Q9Y6X6 1858 aa15.45■□□□□ 0.06
TNF-208ENST00000449264 E5RJQ4 531 aa15.44■□□□□ 0.06
TNF-208ENST00000449264 XPO1O14980 1071 aaKnown RBP15.44■□□□□ 0.06
TNF-208ENST00000449264 TEX28O15482 410 aa15.44■□□□□ 0.06
TNF-208ENST00000449264 MMP8P22894 467 aa15.44■□□□□ 0.06
TNF-208ENST00000449264 GRIK1P39086 918 aa15.44■□□□□ 0.06
TNF-208ENST00000449264 PLA2G4AP47712 749 aa15.44■□□□□ 0.06
TNF-208ENST00000449264 ADCY1Q08828 1119 aa15.44■□□□□ 0.06
TNF-208ENST00000449264 KIF5AQ12840 1032 aa15.44■□□□□ 0.06
TNF-208ENST00000449264 SMC1AQ14683 1233 aaKnown RBP15.44■□□□□ 0.06
TNF-208ENST00000449264 CFAP221Q4G0U5 840 aa15.44■□□□□ 0.06
TNF-208ENST00000449264 LLGL2Q6P1M3 1020 aa15.44■□□□□ 0.06
TNF-208ENST00000449264 PIGZQ86VD9 579 aa15.44■□□□□ 0.06
TNF-208ENST00000449264 MICAL1Q8TDZ2 1067 aa15.44■□□□□ 0.06
TNF-208ENST00000449264 GDPD5Q8WTR4 605 aa15.44■□□□□ 0.06
TNF-208ENST00000449264 SLC35F5Q8WV83 523 aa15.44■□□□□ 0.06
TNF-208ENST00000449264 TIFAQ96CG3 184 aa15.44■□□□□ 0.06
TNF-208ENST00000449264 ARHGEF26Q96DR7 871 aa15.44■□□□□ 0.06
TNF-208ENST00000449264 FUBP3Q96I24 572 aaKnown RBP eCLIP15.44■□□□□ 0.06
TNF-208ENST00000449264 SEPT5Q99719 369 aaPredicted RBP15.44■□□□□ 0.06
TNF-208ENST00000449264 PRO3102Q9H379 93 aa15.44■□□□□ 0.06
TNF-208ENST00000449264 HIDE1A8MVS5 230 aa15.44■□□□□ 0.06
TNF-208ENST00000449264 F8VP50 259 aa15.44■□□□□ 0.06
TNF-208ENST00000449264 CCP110O43303 1012 aa15.44■□□□□ 0.06
TNF-208ENST00000449264 LILRB3O75022 631 aa15.44■□□□□ 0.06
TNF-208ENST00000449264 SOAT2O75908 522 aa15.44■□□□□ 0.06
TNF-208ENST00000449264 VNN2O95498 520 aa15.44■□□□□ 0.06
TNF-208ENST00000449264 ERBB2P04626 1255 aa15.44■□□□□ 0.06
TNF-208ENST00000449264 CALB1P05937 261 aa15.44■□□□□ 0.06
TNF-208ENST00000449264 CNPP09543 421 aaKnown RBP15.44■□□□□ 0.06
TNF-208ENST00000449264 TMEM253P0C7T8 217 aa15.44■□□□□ 0.06
TNF-208ENST00000449264 LCP1P13796 627 aa15.44■□□□□ 0.06
TNF-208ENST00000449264 RRM1P23921 792 aa15.44■□□□□ 0.06
TNF-208ENST00000449264 NDUFV1P49821 464 aa15.44■□□□□ 0.06
TNF-208ENST00000449264 C1QBPQ07021 282 aaKnown RBP15.44■□□□□ 0.06
TNF-208ENST00000449264 MGAT5BQ3V5L5 792 aa15.44■□□□□ 0.06
TNF-208ENST00000449264 ZMIZ2Q8NF64 920 aa15.44■□□□□ 0.06
TNF-208ENST00000449264 SPPL2BQ8TCT7 592 aa15.44■□□□□ 0.06
TNF-208ENST00000449264 TRIM11Q96F44 468 aa15.44■□□□□ 0.06
TNF-208ENST00000449264 CRISPLD1Q9H336 500 aa15.44■□□□□ 0.06
TNF-208ENST00000449264 CNOT8Q9UFF9 292 aaKnown RBP15.44■□□□□ 0.06
TNF-208ENST00000449264 SLC27A5Q9Y2P5 690 aa15.44■□□□□ 0.06
TNF-208ENST00000449264 MACROD2A1Z1Q3 448 aa15.43■□□□□ 0.06
TNF-208ENST00000449264 H3BNC9 293 aa15.43■□□□□ 0.06
TNF-208ENST00000449264 LPXNO60711 386 aa15.43■□□□□ 0.06
TNF-208ENST00000449264 ABL1P00519 1130 aa15.43■□□□□ 0.06
TNF-208ENST00000449264 IRS1P35568 1242 aa15.43■□□□□ 0.06
TNF-208ENST00000449264 GPR15P49685 360 aa15.43■□□□□ 0.06
TNF-208ENST00000449264 GPC5P78333 572 aa15.43■□□□□ 0.06
TNF-208ENST00000449264 ADIGQ0VDE8 80 aa15.43■□□□□ 0.06
TNF-208ENST00000449264 SMARCB1Q12824 385 aa15.43■□□□□ 0.06
TNF-208ENST00000449264 PTP4A2Q12974 167 aa15.43■□□□□ 0.06
TNF-208ENST00000449264 DUSP4Q13115 394 aa15.43■□□□□ 0.06
TNF-208ENST00000449264 LIN9Q5TKA1 542 aa15.43■□□□□ 0.06
TNF-208ENST00000449264 SDHAF4Q5VUM1 108 aa15.43■□□□□ 0.06
TNF-208ENST00000449264 REXO1L1PQ8IX06 675 aa15.43■□□□□ 0.06
TNF-208ENST00000449264 GPR65Q8IYL9 337 aa15.43■□□□□ 0.06
TNF-208ENST00000449264 C2orf15Q8WU43 125 aaKnown RBP15.43■□□□□ 0.06
TNF-208ENST00000449264 C18orf8Q96DM3 657 aa15.43■□□□□ 0.06
TNF-208ENST00000449264 TSGA10Q9BZW7 698 aa15.43■□□□□ 0.06
TNF-208ENST00000449264 RXFP1Q9HBX9 757 aa15.43■□□□□ 0.06
TNF-208ENST00000449264 FNIP2Q9P278 1114 aa15.43■□□□□ 0.06
TNF-208ENST00000449264 INTUQ9ULD6 942 aa15.43■□□□□ 0.06
TNF-208ENST00000449264 GUCA1BQ9UMX6 200 aa15.43■□□□□ 0.06
TNF-208ENST00000449264 DUSP10Q9Y6W6 482 aa15.43■□□□□ 0.06
TNF-208ENST00000449264 C2orf71A6NGG8 1288 aa15.42■□□□□ 0.06
TNF-208ENST00000449264 GOLGA8SH3BPF8 625 aa15.42■□□□□ 0.06
TNF-208ENST00000449264 PJA2O43164 708 aa15.42■□□□□ 0.06
TNF-208ENST00000449264 KRT86O43790 486 aa15.42■□□□□ 0.06
TNF-208ENST00000449264 ADH1AP07327 375 aa15.42■□□□□ 0.06
TNF-208ENST00000449264 MYBL1P10243 752 aa15.42■□□□□ 0.06
TNF-208ENST00000449264 ARHGAP25P42331 645 aa15.42■□□□□ 0.06
TNF-208ENST00000449264 NAP1L1P55209 391 aaKnown RBP15.42■□□□□ 0.06
TNF-208ENST00000449264 SMAD3P84022 425 aaKnown RBP15.42■□□□□ 0.06
TNF-208ENST00000449264 IFRD2Q12894 506 aaPredicted RBP15.42■□□□□ 0.06
TNF-208ENST00000449264 CAMK1Q14012 370 aa15.42■□□□□ 0.06
TNF-208ENST00000449264 RAB33AQ14088 237 aa15.42■□□□□ 0.06
TNF-208ENST00000449264 DDR2Q16832 855 aa15.42■□□□□ 0.06
TNF-208ENST00000449264 VSTM1Q6UX27 236 aa15.42■□□□□ 0.06
TNF-208ENST00000449264 GPRIN1Q7Z2K8 1008 aa15.42■□□□□ 0.06
TNF-208ENST00000449264 STKLD1Q8NE28 680 aa15.42■□□□□ 0.06
TNF-208ENST00000449264 ZNF461Q8TAF7 563 aa15.42■□□□□ 0.06
TNF-208ENST00000449264 STK32AQ8WU08 396 aa15.42■□□□□ 0.06
TNF-208ENST00000449264 EMILIN2Q9BXX0 1053 aa15.42■□□□□ 0.06
TNF-208ENST00000449264 SLC4A5Q9BY07 1137 aa15.42■□□□□ 0.06
TNF-208ENST00000449264 MIS12Q9H081 205 aa15.42■□□□□ 0.06
TNF-208ENST00000449264 LRRC4Q9HBW1 653 aa15.42■□□□□ 0.06
TNF-208ENST00000449264 CSNK1G1Q9HCP0 422 aa15.42■□□□□ 0.06
TNF-208ENST00000449264 ABCB6Q9NP58 842 aa15.42■□□□□ 0.06
TNF-208ENST00000449264 CTTNBP2NLQ9P2B4 639 aa15.42■□□□□ 0.06
TNF-208ENST00000449264 AFF4Q9UHB7 1163 aaKnown RBP15.42■□□□□ 0.06
TNF-208ENST00000449264 STRIP2Q9ULQ0 834 aa15.42■□□□□ 0.06
TNF-208ENST00000449264 NCANO14594 1321 aa15.42■□□□□ 0.06
TNF-208ENST00000449264 EPOPA6NHQ4 379 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms