RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 BCAT1P54687 386 aa11.12□□□□□ -0.63
VIPAS39-203ENST00000448935 TAS2R40P59535 323 aa11.12□□□□□ -0.63
VIPAS39-203ENST00000448935 SOX4Q06945 474 aaPredicted RBP11.12□□□□□ -0.63
VIPAS39-203ENST00000448935 ZNF252P-AS1Q0IIN9 211 aa11.12□□□□□ -0.63
VIPAS39-203ENST00000448935 BST2Q10589 180 aaKnown RBP11.12□□□□□ -0.63
VIPAS39-203ENST00000448935 SIX1Q15475 284 aaPredicted RBP11.12□□□□□ -0.63
VIPAS39-203ENST00000448935 PKDCCQ504Y2 493 aa11.12□□□□□ -0.63
VIPAS39-203ENST00000448935 FAM102AQ5T9C2 384 aaPredicted RBP11.12□□□□□ -0.63
VIPAS39-203ENST00000448935 OR6B2Q6IFH4 312 aa11.12□□□□□ -0.63
VIPAS39-203ENST00000448935 ADGRF2Q8IZF7 708 aa11.12□□□□□ -0.63
VIPAS39-203ENST00000448935 TNS4Q8IZW8 715 aa11.12□□□□□ -0.63
VIPAS39-203ENST00000448935 ANKRD52Q8NB46 1076 aa11.12□□□□□ -0.63
VIPAS39-203ENST00000448935 FAM71BQ8TC56 605 aa11.12□□□□□ -0.63
VIPAS39-203ENST00000448935 SPATA18Q8TC71 538 aa11.12□□□□□ -0.63
VIPAS39-203ENST00000448935 KBTBD7Q8WVZ9 684 aa11.12□□□□□ -0.63
VIPAS39-203ENST00000448935 HLA-CQ95604 372 aa11.12□□□□□ -0.63
VIPAS39-203ENST00000448935 HINFPQ9BQA5 517 aa11.12□□□□□ -0.63
VIPAS39-203ENST00000448935 SAGE1Q9NXZ1 904 aa11.12□□□□□ -0.63
VIPAS39-203ENST00000448935 EFR3BQ9Y2G0 817 aa11.12□□□□□ -0.63
VIPAS39-203ENST00000448935 NR2E1Q9Y466 385 aa11.12□□□□□ -0.63
VIPAS39-203ENST00000448935 FRMPD3Q5JV73 1810 aa11.11□□□□□ -0.63
VIPAS39-203ENST00000448935 A0A0U1RQF3 1178 aa11.11□□□□□ -0.63
VIPAS39-203ENST00000448935 ARHGEF37A1IGU5 675 aa11.11□□□□□ -0.63
VIPAS39-203ENST00000448935 GOLGA6BA6NDN3 693 aa11.11□□□□□ -0.63
VIPAS39-203ENST00000448935 ZSCAN5CA6NGD5 496 aaPredicted RBP11.11□□□□□ -0.63
VIPAS39-203ENST00000448935 F8VP50 259 aa11.11□□□□□ -0.63
VIPAS39-203ENST00000448935 CYB561D2O14569 222 aa11.11□□□□□ -0.63
VIPAS39-203ENST00000448935 DAPK3O43293 454 aa11.11□□□□□ -0.63
VIPAS39-203ENST00000448935 OPA1O60313 960 aa11.11□□□□□ -0.63
VIPAS39-203ENST00000448935 INHAP05111 366 aa11.11□□□□□ -0.63
VIPAS39-203ENST00000448935 RALAP11233 206 aa11.11□□□□□ -0.63
VIPAS39-203ENST00000448935 GPD1P21695 349 aa11.11□□□□□ -0.63
VIPAS39-203ENST00000448935 CD52P31358 61 aa11.11□□□□□ -0.63
VIPAS39-203ENST00000448935 PCK1P35558 622 aa11.11□□□□□ -0.63
VIPAS39-203ENST00000448935 MLH1P40692 756 aa11.11□□□□□ -0.63
VIPAS39-203ENST00000448935 LHX1P48742 406 aa11.11□□□□□ -0.63
VIPAS39-203ENST00000448935 FAM193AP78312 1265 aa11.11□□□□□ -0.63
VIPAS39-203ENST00000448935 CAP1Q01518 475 aa11.11□□□□□ -0.63
VIPAS39-203ENST00000448935 OGDHQ02218 1023 aa11.11□□□□□ -0.63
VIPAS39-203ENST00000448935 MTMR3Q13615 1198 aa11.11□□□□□ -0.63
VIPAS39-203ENST00000448935 CCNG2Q16589 344 aa11.11□□□□□ -0.63
VIPAS39-203ENST00000448935 PROX2Q3B8N5 592 aa11.11□□□□□ -0.63
VIPAS39-203ENST00000448935 DUPD1Q68J44 220 aa11.11□□□□□ -0.63
VIPAS39-203ENST00000448935 TMEM110Q86TL2 294 aa11.11□□□□□ -0.63
VIPAS39-203ENST00000448935 C12orf29Q8N999 325 aa11.11□□□□□ -0.63
VIPAS39-203ENST00000448935 SLC35F5Q8WV83 523 aa11.11□□□□□ -0.63
VIPAS39-203ENST00000448935 HSFY1Q96LI6 401 aa11.11□□□□□ -0.63
VIPAS39-203ENST00000448935 UCN2Q96RP3 112 aa11.11□□□□□ -0.63
VIPAS39-203ENST00000448935 GAD1Q99259 594 aa11.11□□□□□ -0.63
VIPAS39-203ENST00000448935 CNPY3Q9BT09 278 aa11.11□□□□□ -0.63
VIPAS39-203ENST00000448935 SLC4A5Q9BY07 1137 aa11.11□□□□□ -0.63
VIPAS39-203ENST00000448935 AGO3Q9H9G7 860 aaKnown RBP11.11□□□□□ -0.63
VIPAS39-203ENST00000448935 RSAD1Q9HA92 442 aa11.11□□□□□ -0.63
VIPAS39-203ENST00000448935 GOLGA2P5Q9HBQ8 144 aa11.11□□□□□ -0.63
VIPAS39-203ENST00000448935 CARNS1A5YM72 827 aa11.1□□□□□ -0.63
VIPAS39-203ENST00000448935 ARL5CA6NH57 179 aa11.1□□□□□ -0.63
VIPAS39-203ENST00000448935 CFAP99D6REC4 459 aa11.1□□□□□ -0.63
VIPAS39-203ENST00000448935 E5RJQ4 531 aa11.1□□□□□ -0.63
VIPAS39-203ENST00000448935 PFKMP08237 780 aa11.1□□□□□ -0.63
VIPAS39-203ENST00000448935 GHRP10912 638 aa11.1□□□□□ -0.63
VIPAS39-203ENST00000448935 OAS2P29728 719 aaKnown RBP11.1□□□□□ -0.63
VIPAS39-203ENST00000448935 GRK4P32298 578 aa11.1□□□□□ -0.63
VIPAS39-203ENST00000448935 GJC1P36383 396 aa11.1□□□□□ -0.63
VIPAS39-203ENST00000448935 HSPA9P38646 679 aaKnown RBP11.1□□□□□ -0.63
VIPAS39-203ENST00000448935 PTGIRP43119 386 aa11.1□□□□□ -0.63
VIPAS39-203ENST00000448935 ZNF143P52747 638 aaPredicted RBP11.1□□□□□ -0.63
VIPAS39-203ENST00000448935 SLC6A3Q01959 620 aa11.1□□□□□ -0.63
VIPAS39-203ENST00000448935 GABPB1Q06547 395 aaPredicted RBP11.1□□□□□ -0.63
VIPAS39-203ENST00000448935 KLF1Q13351 362 aaPredicted RBP11.1□□□□□ -0.63
VIPAS39-203ENST00000448935 DSC3Q14574 896 aa11.1□□□□□ -0.63
VIPAS39-203ENST00000448935 LPIN1Q14693 890 aa11.1□□□□□ -0.63
VIPAS39-203ENST00000448935 PPP1R7Q15435 360 aa11.1□□□□□ -0.63
VIPAS39-203ENST00000448935 TRIM71Q2Q1W2 868 aaKnown RBP11.1□□□□□ -0.63
VIPAS39-203ENST00000448935 TFDP3Q5H9I0 405 aa11.1□□□□□ -0.63
VIPAS39-203ENST00000448935 SPDYCQ5MJ68 293 aa11.1□□□□□ -0.63
VIPAS39-203ENST00000448935 ATL2Q8NHH9 583 aa11.1□□□□□ -0.63
VIPAS39-203ENST00000448935 JOSD2Q8TAC2 188 aa11.1□□□□□ -0.63
VIPAS39-203ENST00000448935 ZFP42Q96MM3 310 aa11.1□□□□□ -0.63
VIPAS39-203ENST00000448935 UROC1Q96N76 676 aa11.1□□□□□ -0.63
VIPAS39-203ENST00000448935 SLITRK1Q96PX8 696 aa11.1□□□□□ -0.63
VIPAS39-203ENST00000448935 FRMD8P1Q9BZ68 369 aaPredicted RBP11.1□□□□□ -0.63
VIPAS39-203ENST00000448935 DCLK3Q9C098 648 aa11.1□□□□□ -0.63
VIPAS39-203ENST00000448935 PLEKHA4Q9H4M7 779 aa11.1□□□□□ -0.63
VIPAS39-203ENST00000448935 FAM49BQ9NUQ9 324 aa11.1□□□□□ -0.63
VIPAS39-203ENST00000448935 MTRF1LQ9UGC7 380 aaKnown RBP11.1□□□□□ -0.63
VIPAS39-203ENST00000448935 TDRD15B5MCY1 1934 aaKnown RBP11.1□□□□□ -0.63
VIPAS39-203ENST00000448935 TCRBV7S2A1N4TA0A589 114 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 KBTBD13C9JR72 458 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 NDC80O14777 642 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 LRCH4O75427 683 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 PDGFRBP09619 1106 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 FGFR1P11362 822 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 GRIK3Q13003 919 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 CFAP58Q5T655 872 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 TTC27Q6P3X3 843 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 DRICH1Q6PGQ1 229 aaPredicted RBP11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 DSTYKQ6XUX3 929 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 SPOCD1Q6ZMY3 1216 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 AGMOQ6ZNB7 445 aa11.09□□□□□ -0.63
VIPAS39-203ENST00000448935 FAM183BPQ6ZVS7 135 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms