RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 PRKCIP41743 596 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 GPD2P43304 727 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 ALDH1A3P47895 512 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 TUFMP49411 452 aaKnown RBP12.53□□□□□ -0.4
RCL1-208ENST00000448872 RGS7P49802 495 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 BCAT1P54687 386 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 USP46P62068 366 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 COL19A1Q14993 1142 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 PPM1LQ5SGD2 360 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 ANKRD54Q6NXT1 300 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 PMF1Q6P1K2 205 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 SYCE2Q6PIF2 218 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 VSTM1Q6UX27 236 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 TMEM184AQ6ZMB5 413 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 CCDC149Q6ZUS6 474 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 PIGZQ86VD9 579 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 DNAAF5Q86Y56 855 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 CNGA4Q8IV77 575 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 C1orf131Q8NDD1 294 aaKnown RBP12.53□□□□□ -0.4
RCL1-208ENST00000448872 SCAMP5Q8TAC9 235 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 CASP10Q92851 521 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 ZNF707Q96C28 371 aaPredicted RBP12.53□□□□□ -0.4
RCL1-208ENST00000448872 C8orf48Q96LL4 319 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 CHP1Q99653 195 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 NUCKS1Q9H1E3 243 aaKnown RBP12.53□□□□□ -0.4
RCL1-208ENST00000448872 SEPT11Q9NVA2 429 aaKnown RBP12.53□□□□□ -0.4
RCL1-208ENST00000448872 TJP2Q9UDY2 1190 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 MAFFQ9ULX9 164 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 PCDHGC3Q9UN70 934 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 CCDC195A0A1B0GUA6 201 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 NRG2O14511 850 aaPredicted RBP12.53□□□□□ -0.4
RCL1-208ENST00000448872 C1RP00736 705 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 LRG1P02750 347 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 SERPING1P05155 500 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 BST2Q10589 180 aaKnown RBP12.53□□□□□ -0.4
RCL1-208ENST00000448872 IFRD2Q12894 506 aaPredicted RBP12.53□□□□□ -0.4
RCL1-208ENST00000448872 STILQ15468 1287 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 SKIV2LQ15477 1246 aaKnown RBP12.53□□□□□ -0.4
RCL1-208ENST00000448872 CLUL1Q15846 466 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 MEA1Q16626 185 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 TDRD12Q587J7 1177 aaKnown RBP12.53□□□□□ -0.4
RCL1-208ENST00000448872 RARS2Q5T160 578 aaKnown RBP12.53□□□□□ -0.4
RCL1-208ENST00000448872 NAA35Q5VZE5 725 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 SMYD5Q6GMV2 418 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 CCDC186Q7Z3E2 898 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 SLC35F5Q8WV83 523 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 CPA5Q8WXQ8 436 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 PDCL3Q9H2J4 239 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 HCFC1R1Q9NWW0 138 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 TAS2R14Q9NYV8 317 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 IMPACTQ9P2X3 320 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 HSFX1Q9UBD0 423 aa12.53□□□□□ -0.4
RCL1-208ENST00000448872 SLC38A8A6NNN8 435 aa12.52□□□□□ -0.41
RCL1-208ENST00000448872 DDX3XO00571 662 aaKnown RBP eCLIP12.52□□□□□ -0.41
RCL1-208ENST00000448872 TNFRSF10BO14763 440 aa12.52□□□□□ -0.41
RCL1-208ENST00000448872 XPO1O14980 1071 aaKnown RBP12.52□□□□□ -0.41
RCL1-208ENST00000448872 TRIM66O15016 1216 aa12.52□□□□□ -0.41
RCL1-208ENST00000448872 CCDC172P0C7W6 258 aa12.52□□□□□ -0.41
RCL1-208ENST00000448872 SETSIPP0DME0 302 aa12.52□□□□□ -0.41
RCL1-208ENST00000448872 HMGA1P17096 107 aaKnown RBP12.52□□□□□ -0.41
RCL1-208ENST00000448872 ANXA13P27216 316 aa12.52□□□□□ -0.41
RCL1-208ENST00000448872 EIF4A3P38919 411 aaKnown RBP12.52□□□□□ -0.41
RCL1-208ENST00000448872 SLC5A3P53794 718 aa12.52□□□□□ -0.41
RCL1-208ENST00000448872 EPHB3P54753 998 aa12.52□□□□□ -0.41
RCL1-208ENST00000448872 RPL10AP62906 217 aaKnown RBP12.52□□□□□ -0.41
RCL1-208ENST00000448872 NTHL1P78549 312 aa12.52□□□□□ -0.41
RCL1-208ENST00000448872 C2CD6Q53TS8 623 aa12.52□□□□□ -0.41
RCL1-208ENST00000448872 ZNF677Q86XU0 584 aa12.52□□□□□ -0.41
RCL1-208ENST00000448872 SLC30A5Q8TAD4 765 aa12.52□□□□□ -0.41
RCL1-208ENST00000448872 HDAC7Q8WUI4 952 aa12.52□□□□□ -0.41
RCL1-208ENST00000448872 NDRG1Q92597 394 aaKnown RBP12.52□□□□□ -0.41
RCL1-208ENST00000448872 PABPC5Q96DU9 382 aaKnown RBP12.52□□□□□ -0.41
RCL1-208ENST00000448872 LHX5Q9H2C1 402 aa12.52□□□□□ -0.41
RCL1-208ENST00000448872 SFXN1Q9H9B4 322 aa12.52□□□□□ -0.41
RCL1-208ENST00000448872 ZNF334Q9HCZ1 680 aaPredicted RBP12.52□□□□□ -0.41
RCL1-208ENST00000448872 MAGED2Q9UNF1 606 aaPredicted RBP12.52□□□□□ -0.41
RCL1-208ENST00000448872 PRUNE2Q8WUY3 3088 aa12.51□□□□□ -0.41
RCL1-208ENST00000448872 TMCO5BA8MYB1 307 aa12.51□□□□□ -0.41
RCL1-208ENST00000448872 H3BQ06 376 aaPredicted RBP12.51□□□□□ -0.41
RCL1-208ENST00000448872 CYP1A1P04798 512 aaPredicted RBP12.51□□□□□ -0.41
RCL1-208ENST00000448872 LCP1P13796 627 aa12.51□□□□□ -0.41
RCL1-208ENST00000448872 TNFAIP3P21580 790 aa12.51□□□□□ -0.41
RCL1-208ENST00000448872 PLA2G4AP47712 749 aa12.51□□□□□ -0.41
RCL1-208ENST00000448872 PGFP49763 221 aa12.51□□□□□ -0.41
RCL1-208ENST00000448872 NOMO3P69849 1222 aa12.51□□□□□ -0.41
RCL1-208ENST00000448872 PDCLQ13371 301 aa12.51□□□□□ -0.41
RCL1-208ENST00000448872 PLD1Q13393 1074 aa12.51□□□□□ -0.41
RCL1-208ENST00000448872 CLEC16AQ2KHT3 1053 aa12.51□□□□□ -0.41
RCL1-208ENST00000448872 GRASPQ7Z6J2 395 aaPredicted RBP12.51□□□□□ -0.41
RCL1-208ENST00000448872 DNAJB7Q7Z6W7 309 aaPredicted RBP12.51□□□□□ -0.41
RCL1-208ENST00000448872 FMNL3Q8IVF7 1028 aa12.51□□□□□ -0.41
RCL1-208ENST00000448872 SPATA17Q96L03 361 aa12.51□□□□□ -0.41
RCL1-208ENST00000448872 CPXM1Q96SM3 734 aa12.51□□□□□ -0.41
RCL1-208ENST00000448872 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.51□□□□□ -0.41
RCL1-208ENST00000448872 PRKD2Q9BZL6 878 aa12.51□□□□□ -0.41
RCL1-208ENST00000448872 S1PR5Q9H228 398 aa12.51□□□□□ -0.41
RCL1-208ENST00000448872 ST7Q9NRC1 585 aa12.51□□□□□ -0.41
RCL1-208ENST00000448872 DZANK1Q9NVP4 752 aa12.51□□□□□ -0.41
RCL1-208ENST00000448872 ZNHIT6Q9NWK9 470 aaKnown RBP12.51□□□□□ -0.41
RCL1-208ENST00000448872 ZDHHC7Q9NXF8 308 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms