RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 GCOM2Q9BZD3 368 aaPredicted RBP9.56□□□□□ -0.88
SMC6-207ENST00000448223 A1CFQ9NQ94 594 aaKnown RBP9.56□□□□□ -0.88
SMC6-207ENST00000448223 MTMR4Q9NYA4 1195 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 MRPL39Q9NYK5 338 aaKnown RBP9.56□□□□□ -0.88
SMC6-207ENST00000448223 ADAM30Q9UKF2 790 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 CHKBQ9Y259 395 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 USP54Q70EL1 1684 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 LMTK3Q96Q04 1460 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 SPAG6O75602 509 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 PMLP29590 882 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 LIG4P49917 911 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 CSE1LP55060 971 aaKnown RBP9.56□□□□□ -0.88
SMC6-207ENST00000448223 USP46P62068 366 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 TRAF3Q13114 568 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 EFR3AQ14156 821 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 IMPG1Q17R60 797 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 C2CD6Q53TS8 623 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 CENPPQ6IPU0 288 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 TAF2Q6P1X5 1199 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 MTDHQ86UE4 582 aaKnown RBP9.56□□□□□ -0.88
SMC6-207ENST00000448223 AENQ8WTP8 325 aaKnown RBP9.56□□□□□ -0.88
SMC6-207ENST00000448223 C1orf54Q8WWF1 131 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 E2F7Q96AV8 911 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 C9orf72Q96LT7 481 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 REEP2Q9BRK0 252 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 WNT8AQ9H1J5 351 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 ZWILCHQ9H900 591 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 MARCH7Q9H992 704 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 CHMP1AQ9HD42 196 aaPredicted RBP9.56□□□□□ -0.88
SMC6-207ENST00000448223 ENTPD7Q9NQZ7 604 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 UBA2Q9UBT2 640 aaPredicted RBP9.56□□□□□ -0.88
SMC6-207ENST00000448223 LEMD3Q9Y2U8 911 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 CDC40O60508 579 aaKnown RBP eCLIP9.56□□□□□ -0.88
SMC6-207ENST00000448223 MXI1P50539 228 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 OVGP1Q12889 678 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 DRAP1Q14919 205 aaPredicted RBP9.56□□□□□ -0.88
SMC6-207ENST00000448223 ZNF280DQ6N043 979 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 LLGL2Q6P1M3 1020 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 RBM44Q6ZP01 1051 aaKnown RBP9.56□□□□□ -0.88
SMC6-207ENST00000448223 LRRC20Q8TCA0 184 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 PCDH12Q9NPG4 1184 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 TMEM161AQ9NX61 479 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 GIN1Q9NXP7 522 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.56□□□□□ -0.88
SMC6-207ENST00000448223 KLHL3Q9UH77 587 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 NARFQ9UHQ1 456 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 SYNJ2BP-COX16A0A087WUM0 186 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 FECHP22830 423 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 HADHAP40939 763 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 NAA20P61599 178 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 NFIAQ12857 509 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 SLC5A9Q2M3M2 681 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 SBK1Q52WX2 424 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 NEK5Q6P3R8 708 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 KRT74Q7RTS7 529 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 ERICH1Q86X53 443 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 METTL13Q8N6R0 699 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 TTC8Q8TAM2 541 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 MMTAG2Q9BU76 263 aaKnown RBP9.55□□□□□ -0.88
SMC6-207ENST00000448223 SHCBP1LQ9BZQ2 653 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 ZNF224Q9NZL3 707 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 COX16Q9P0S2 106 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 CNOT8Q9UFF9 292 aaKnown RBP9.55□□□□□ -0.88
SMC6-207ENST00000448223 TAGLN3Q9UI15 199 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 NID2Q14112 1375 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 ZBTB5O15062 677 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 CALB1P05937 261 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 PAMP19021 973 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 MAGEA8P43361 318 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 GALCP54803 685 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 COX10Q12887 443 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 ECM1Q16610 540 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 FASTKD1Q53R41 847 aaKnown RBP9.55□□□□□ -0.88
SMC6-207ENST00000448223 FAAH2Q6GMR7 532 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 SLFN12Q8IYM2 578 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 ATL2Q8NHH9 583 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 ANKS1AQ92625 1134 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 HDHD2Q9H0R4 259 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 MYH2Q9UKX2 1941 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 TRIM49D1C9J1S8 452 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 AGPSO00116 658 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 MED24O75448 989 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 FESP07332 822 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 SOX5P35711 763 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 PTDSS1P48651 473 aaKnown RBP9.55□□□□□ -0.88
SMC6-207ENST00000448223 ITGA9Q13797 1035 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 TFDP2Q14188 446 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 SLC35G1Q2M3R5 365 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 C6orf183Q5T699 404 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 TMPRSS6Q8IU80 811 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 SIPA1Q96FS4 1042 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 OTUB1Q96FW1 271 aaPredicted RBP9.55□□□□□ -0.88
SMC6-207ENST00000448223 OTUD5Q96G74 571 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 BTBD10Q9BSF8 475 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 OSBPL10Q9BXB5 764 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 ARHGEF38Q9NXL2 777 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 AIPL1Q9NZN9 384 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 DAGLAQ9Y4D2 1042 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 CDY2AQ9Y6F7 541 aa9.55□□□□□ -0.88
SMC6-207ENST00000448223 CDY1Q9Y6F8 540 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms