RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 CLRN2A0PK11 232 aa20.03■□□□□ 0.8
HMGA1-205ENST00000447654 RGPD3A6NKT7 1758 aaPredicted RBP20.03■□□□□ 0.8
HMGA1-205ENST00000447654 PIK3CDO00329 1044 aa20.03■□□□□ 0.8
HMGA1-205ENST00000447654 ITM2AO43736 263 aa20.03■□□□□ 0.8
HMGA1-205ENST00000447654 NPM3O75607 178 aaKnown RBP20.03■□□□□ 0.8
HMGA1-205ENST00000447654 RAD17O75943 681 aa20.03■□□□□ 0.8
HMGA1-205ENST00000447654 NDUFB10O96000 172 aa20.03■□□□□ 0.8
HMGA1-205ENST00000447654 DHRS4L1P0CG22 281 aa20.03■□□□□ 0.8
HMGA1-205ENST00000447654 MYL2P10916 166 aa20.03■□□□□ 0.8
HMGA1-205ENST00000447654 COL6A2P12110 1019 aa20.03■□□□□ 0.8
HMGA1-205ENST00000447654 PLS3P13797 630 aa20.03■□□□□ 0.8
HMGA1-205ENST00000447654 KRT4P19013 534 aa20.03■□□□□ 0.8
HMGA1-205ENST00000447654 ZBTB17Q13105 803 aa20.03■□□□□ 0.8
HMGA1-205ENST00000447654 MESDQ14696 234 aa20.03■□□□□ 0.8
HMGA1-205ENST00000447654 TRIP10Q15642 601 aa20.03■□□□□ 0.8
HMGA1-205ENST00000447654 ATRNL1Q5VV63 1379 aa20.03■□□□□ 0.8
HMGA1-205ENST00000447654 IZUMO3Q5VZ72 239 aa20.03■□□□□ 0.8
HMGA1-205ENST00000447654 RGPD4Q7Z3J3 1758 aa20.03■□□□□ 0.8
HMGA1-205ENST00000447654 TRIM50Q86XT4 487 aa20.03■□□□□ 0.8
HMGA1-205ENST00000447654 RIN3Q8TB24 985 aa20.03■□□□□ 0.8
HMGA1-205ENST00000447654 MAK16Q9BXY0 300 aaKnown RBP20.03■□□□□ 0.8
HMGA1-205ENST00000447654 C6orf203Q9P0P8 240 aaPredicted RBP20.03■□□□□ 0.8
HMGA1-205ENST00000447654 MEIS2O14770 477 aa20.02■□□□□ 0.8
HMGA1-205ENST00000447654 NCOA4Q13772 614 aa20.02■□□□□ 0.8
HMGA1-205ENST00000447654 BMT2Q1RMZ1 405 aa20.02■□□□□ 0.8
HMGA1-205ENST00000447654 EFHC2Q5JST6 749 aa20.02■□□□□ 0.8
HMGA1-205ENST00000447654 GJB7Q6PEY0 223 aa20.02■□□□□ 0.8
HMGA1-205ENST00000447654 RNF111Q6ZNA4 994 aa20.02■□□□□ 0.8
HMGA1-205ENST00000447654 TMEM179Q6ZVK1 233 aa20.02■□□□□ 0.8
HMGA1-205ENST00000447654 DCAF4Q8WV16 495 aa20.02■□□□□ 0.8
HMGA1-205ENST00000447654 CSRNP1Q96S65 589 aa20.02■□□□□ 0.8
HMGA1-205ENST00000447654 GPR88Q9GZN0 384 aa20.02■□□□□ 0.8
HMGA1-205ENST00000447654 WWP1Q9H0M0 922 aa20.02■□□□□ 0.8
HMGA1-205ENST00000447654 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.02■□□□□ 0.8
HMGA1-205ENST00000447654 TCP10L2B9ZVM9 353 aa20.02■□□□□ 0.8
HMGA1-205ENST00000447654 POC1B-GALNT4F8VUJ3 575 aa20.02■□□□□ 0.8
HMGA1-205ENST00000447654 DNAJA2O60884 412 aa20.02■□□□□ 0.8
HMGA1-205ENST00000447654 AKAP3O75969 853 aa20.02■□□□□ 0.8
HMGA1-205ENST00000447654 FTLP02792 175 aaPredicted RBP20.02■□□□□ 0.8
HMGA1-205ENST00000447654 ENO1P06733 434 aaKnown RBP20.02■□□□□ 0.8
HMGA1-205ENST00000447654 RRM1P23921 792 aa20.02■□□□□ 0.8
HMGA1-205ENST00000447654 CYP4F22Q6NT55 531 aa20.02■□□□□ 0.8
HMGA1-205ENST00000447654 PRUNE1Q86TP1 453 aa20.02■□□□□ 0.8
HMGA1-205ENST00000447654 TTC7BQ86TV6 843 aa20.02■□□□□ 0.8
HMGA1-205ENST00000447654 BORCS5Q969J3 196 aa20.02■□□□□ 0.8
HMGA1-205ENST00000447654 EFHD2Q96C19 240 aaPredicted RBP20.02■□□□□ 0.8
HMGA1-205ENST00000447654 TRPC7Q9HCX4 862 aa20.02■□□□□ 0.8
HMGA1-205ENST00000447654 PALMDQ9NP74 551 aa20.02■□□□□ 0.8
HMGA1-205ENST00000447654 SELENONQ9NZV5 590 aa20.02■□□□□ 0.8
HMGA1-205ENST00000447654 TSC22D4Q9Y3Q8 395 aa20.02■□□□□ 0.8
HMGA1-205ENST00000447654 ZNF701M0R085 212 aaPredicted RBP20.01■□□□□ 0.79
HMGA1-205ENST00000447654 CLDN3O15551 220 aa20.01■□□□□ 0.79
HMGA1-205ENST00000447654 LRRN2O75325 713 aa20.01■□□□□ 0.79
HMGA1-205ENST00000447654 GZMAP12544 262 aa20.01■□□□□ 0.79
HMGA1-205ENST00000447654 NAT1P18440 290 aa20.01■□□□□ 0.79
HMGA1-205ENST00000447654 PHBP35232 272 aa20.01■□□□□ 0.79
HMGA1-205ENST00000447654 BTKQ06187 659 aa20.01■□□□□ 0.79
HMGA1-205ENST00000447654 NIPAL1Q6NVV3 410 aa20.01■□□□□ 0.79
HMGA1-205ENST00000447654 BANPQ8N9N5 519 aa20.01■□□□□ 0.79
HMGA1-205ENST00000447654 ATP6V0A1Q93050 837 aa20.01■□□□□ 0.79
HMGA1-205ENST00000447654 PPP1R10Q96QC0 940 aaKnown RBP20.01■□□□□ 0.79
HMGA1-205ENST00000447654 ZNF277Q9NRM2 450 aaPredicted RBP20.01■□□□□ 0.79
HMGA1-205ENST00000447654 IGSF9Q9P2J2 1179 aa20.01■□□□□ 0.79
HMGA1-205ENST00000447654 EXOC7Q9UPT5 735 aa20.01■□□□□ 0.79
HMGA1-205ENST00000447654 TRIM17Q9Y577 477 aa20.01■□□□□ 0.79
HMGA1-205ENST00000447654 FAM58BPP0C7Q3 252 aa20.01■□□□□ 0.79
HMGA1-205ENST00000447654 ZNF23P17027 643 aa20.01■□□□□ 0.79
HMGA1-205ENST00000447654 ECE1P42892 770 aa20.01■□□□□ 0.79
HMGA1-205ENST00000447654 NFIL3Q16649 462 aa20.01■□□□□ 0.79
HMGA1-205ENST00000447654 RTKN2Q8IZC4 609 aa20.01■□□□□ 0.79
HMGA1-205ENST00000447654 GIT1Q9Y2X7 761 aa20.01■□□□□ 0.79
HMGA1-205ENST00000447654 RSPH10B2B2RC85 870 aa20■□□□□ 0.79
HMGA1-205ENST00000447654 ADAM23O75077 832 aa20■□□□□ 0.79
HMGA1-205ENST00000447654 RSPH10BP0C881 870 aa20■□□□□ 0.79
HMGA1-205ENST00000447654 CPOXP36551 454 aa20■□□□□ 0.79
HMGA1-205ENST00000447654 BAG6P46379 1132 aa20■□□□□ 0.79
HMGA1-205ENST00000447654 CPA2P48052 419 aa20■□□□□ 0.79
HMGA1-205ENST00000447654 LZTR1Q8N653 840 aa20■□□□□ 0.79
HMGA1-205ENST00000447654 TCP10LQ8TDR4 215 aa20■□□□□ 0.79
HMGA1-205ENST00000447654 PYDC1Q8WXC3 89 aa20■□□□□ 0.79
HMGA1-205ENST00000447654 CLPTM1LQ96KA5 538 aa20■□□□□ 0.79
HMGA1-205ENST00000447654 NEURL2Q9BR09 285 aa20■□□□□ 0.79
HMGA1-205ENST00000447654 UNKQ9C0B0 810 aaKnown RBP20■□□□□ 0.79
HMGA1-205ENST00000447654 SAYSD1Q9NPB0 183 aa20■□□□□ 0.79
HMGA1-205ENST00000447654 CHST7Q9NS84 486 aa20■□□□□ 0.79
HMGA1-205ENST00000447654 SEPT11Q9NVA2 429 aaKnown RBP20■□□□□ 0.79
HMGA1-205ENST00000447654 MYH11P35749 1972 aa20■□□□□ 0.79
HMGA1-205ENST00000447654 A0A1W2PPM1 405 aa20■□□□□ 0.79
HMGA1-205ENST00000447654 SPDYE2BA6NHP3 402 aa20■□□□□ 0.79
HMGA1-205ENST00000447654 H3BSA7 217 aa20■□□□□ 0.79
HMGA1-205ENST00000447654 ADCY6O43306 1168 aa20■□□□□ 0.79
HMGA1-205ENST00000447654 ENTPD3O75355 529 aa20■□□□□ 0.79
HMGA1-205ENST00000447654 NR3C1P04150 777 aa20■□□□□ 0.79
HMGA1-205ENST00000447654 PLA2G4BP0C869 781 aa20■□□□□ 0.79
HMGA1-205ENST00000447654 SPDYE6P0CI01 402 aa20■□□□□ 0.79
HMGA1-205ENST00000447654 CCR3P51677 355 aa20■□□□□ 0.79
HMGA1-205ENST00000447654 ARPC4P59998 168 aa20■□□□□ 0.79
HMGA1-205ENST00000447654 NOP14P78316 857 aaKnown RBP20■□□□□ 0.79
HMGA1-205ENST00000447654 KCNC4Q03721 635 aa20■□□□□ 0.79
HMGA1-205ENST00000447654 CCNG2Q16589 344 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms