RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 NOP56O00567 594 aaKnown RBP5.7□□□□□ -1.5
SDCBP-205ENST00000447267 NUAK1O60285 661 aa5.7□□□□□ -1.5
SDCBP-205ENST00000447267 CBFA2T3O75081 653 aa5.7□□□□□ -1.5
SDCBP-205ENST00000447267 SEMA7AO75326 666 aa5.7□□□□□ -1.5
SDCBP-205ENST00000447267 EIF3JO75822 258 aaKnown RBP5.7□□□□□ -1.5
SDCBP-205ENST00000447267 INHBBP09529 407 aa5.7□□□□□ -1.5
SDCBP-205ENST00000447267 MYCLP12524 364 aaPredicted RBP5.7□□□□□ -1.5
SDCBP-205ENST00000447267 ZNF16P17020 682 aaPredicted RBP5.7□□□□□ -1.5
SDCBP-205ENST00000447267 UBA1P22314 1058 aaKnown RBP5.7□□□□□ -1.5
SDCBP-205ENST00000447267 FCARP24071 287 aa5.7□□□□□ -1.5
SDCBP-205ENST00000447267 MARK3P27448 753 aa5.7□□□□□ -1.5
SDCBP-205ENST00000447267 DCTP40126 519 aa5.7□□□□□ -1.5
SDCBP-205ENST00000447267 PTGER3P43115 390 aa5.7□□□□□ -1.5
SDCBP-205ENST00000447267 KIR2DL1P43626 348 aaPredicted RBP5.7□□□□□ -1.5
SDCBP-205ENST00000447267 KIR2DL2P43627 348 aaPredicted RBP5.7□□□□□ -1.5
SDCBP-205ENST00000447267 SLC11A1P49279 550 aa5.7□□□□□ -1.5
SDCBP-205ENST00000447267 KPNA1P52294 538 aaPredicted RBP5.7□□□□□ -1.5
SDCBP-205ENST00000447267 DGKEP52429 567 aa5.7□□□□□ -1.5
SDCBP-205ENST00000447267 EPHB3P54753 998 aa5.7□□□□□ -1.5
SDCBP-205ENST00000447267 PCBP3P57721 371 aaKnown RBP5.7□□□□□ -1.5
SDCBP-205ENST00000447267 GFPT1Q06210 699 aaPredicted RBP5.7□□□□□ -1.5
SDCBP-205ENST00000447267 MYO1EQ12965 1108 aa5.7□□□□□ -1.5
SDCBP-205ENST00000447267 ADGRF1Q5T601 910 aa5.7□□□□□ -1.5
SDCBP-205ENST00000447267 RCSD1Q6JBY9 416 aa5.7□□□□□ -1.5
SDCBP-205ENST00000447267 CEP128Q6ZU80 1094 aa5.7□□□□□ -1.5
SDCBP-205ENST00000447267 GALNT15Q8N3T1 639 aa5.7□□□□□ -1.5
SDCBP-205ENST00000447267 FRMD1Q8N878 549 aa5.7□□□□□ -1.5
SDCBP-205ENST00000447267 TMEM52Q8NDY8 209 aa5.7□□□□□ -1.5
SDCBP-205ENST00000447267 PANK1Q8TE04 598 aa5.7□□□□□ -1.5
SDCBP-205ENST00000447267 NSUN6Q8TEA1 469 aaKnown RBP5.7□□□□□ -1.5
SDCBP-205ENST00000447267 FGF11Q92914 225 aa5.7□□□□□ -1.5
SDCBP-205ENST00000447267 NKD1Q969G9 470 aa5.7□□□□□ -1.5
SDCBP-205ENST00000447267 ELSPBP1Q96BH3 223 aa5.7□□□□□ -1.5
SDCBP-205ENST00000447267 TMEM176AQ96HP8 235 aa5.7□□□□□ -1.5
SDCBP-205ENST00000447267 C20orf173Q96LM9 149 aa5.7□□□□□ -1.5
SDCBP-205ENST00000447267 RMDN3Q96TC7 470 aa5.7□□□□□ -1.5
SDCBP-205ENST00000447267 RANBP17Q9H2T7 1088 aaKnown RBP5.7□□□□□ -1.5
SDCBP-205ENST00000447267 NRDE2Q9H7Z3 1164 aa5.7□□□□□ -1.5
SDCBP-205ENST00000447267 EPB41L4AQ9HCS5 686 aaPredicted RBP5.7□□□□□ -1.5
SDCBP-205ENST00000447267 CHST7Q9NS84 486 aa5.7□□□□□ -1.5
SDCBP-205ENST00000447267 ZDHHC7Q9NXF8 308 aa5.7□□□□□ -1.5
SDCBP-205ENST00000447267 MTMR4Q9NYA4 1195 aa5.7□□□□□ -1.5
SDCBP-205ENST00000447267 ZMYM5Q9UJ78 669 aa5.7□□□□□ -1.5
SDCBP-205ENST00000447267 GPR55Q9Y2T6 319 aaPredicted RBP5.7□□□□□ -1.5
SDCBP-205ENST00000447267 MUC22E2RYF6 1773 aaPredicted RBP5.7□□□□□ -1.5
SDCBP-205ENST00000447267 FNDC1Q4ZHG4 1894 aaPredicted RBP5.69□□□□□ -1.5
SDCBP-205ENST00000447267 GOLGA4Q13439 2230 aaKnown RBP5.69□□□□□ -1.5
SDCBP-205ENST00000447267 MBLAC1A4D2B0 266 aaPredicted RBP5.69□□□□□ -1.5
SDCBP-205ENST00000447267 PRDM1O75626 825 aa5.69□□□□□ -1.5
SDCBP-205ENST00000447267 ZNF205O95201 554 aa5.69□□□□□ -1.5
SDCBP-205ENST00000447267 RPL17P18621 184 aaKnown RBP5.69□□□□□ -1.5
SDCBP-205ENST00000447267 MCM4P33991 863 aa5.69□□□□□ -1.5
SDCBP-205ENST00000447267 CCNFP41002 786 aa5.69□□□□□ -1.5
SDCBP-205ENST00000447267 VIPR2P41587 438 aa5.69□□□□□ -1.5
SDCBP-205ENST00000447267 HSF5Q4G112 596 aaPredicted RBP5.69□□□□□ -1.5
SDCBP-205ENST00000447267 ZNF394Q53GI3 561 aa5.69□□□□□ -1.5
SDCBP-205ENST00000447267 CCDC158Q5M9N0 1113 aa5.69□□□□□ -1.5
SDCBP-205ENST00000447267 RTP2Q5QGT7 225 aa5.69□□□□□ -1.5
SDCBP-205ENST00000447267 ARHGEF16Q5VV41 709 aa5.69□□□□□ -1.5
SDCBP-205ENST00000447267 CTR9Q6PD62 1173 aa5.69□□□□□ -1.5
SDCBP-205ENST00000447267 LILRA6Q6PI73 481 aa5.69□□□□□ -1.5
SDCBP-205ENST00000447267 CRTC3Q6UUV7 619 aa5.69□□□□□ -1.5
SDCBP-205ENST00000447267 DHRS13Q6UX07 377 aa5.69□□□□□ -1.5
SDCBP-205ENST00000447267 ECHDC2Q86YB7 292 aa5.69□□□□□ -1.5
SDCBP-205ENST00000447267 SYT12Q8IV01 421 aa5.69□□□□□ -1.5
SDCBP-205ENST00000447267 DEFB119Q8N690 84 aa5.69□□□□□ -1.5
SDCBP-205ENST00000447267 SETD7Q8WTS6 366 aaKnown RBP5.69□□□□□ -1.5
SDCBP-205ENST00000447267 TRAPPC12Q8WVT3 735 aa5.69□□□□□ -1.5
SDCBP-205ENST00000447267 NXPE2Q96DL1 559 aa5.69□□□□□ -1.5
SDCBP-205ENST00000447267 HIC2Q96JB3 615 aa5.69□□□□□ -1.5
SDCBP-205ENST00000447267 B3GALT6Q96L58 329 aa5.69□□□□□ -1.5
SDCBP-205ENST00000447267 RPS6KC1Q96S38 1066 aa5.69□□□□□ -1.5
SDCBP-205ENST00000447267 LGMNQ99538 433 aa5.69□□□□□ -1.5
SDCBP-205ENST00000447267 PLEKHA4Q9H4M7 779 aa5.69□□□□□ -1.5
SDCBP-205ENST00000447267 CNTD2Q9H8S5 307 aa5.69□□□□□ -1.5
SDCBP-205ENST00000447267 STARD5Q9NSY2 213 aa5.69□□□□□ -1.5
SDCBP-205ENST00000447267 DNMT3BQ9UBC3 853 aaKnown RBP5.69□□□□□ -1.5
SDCBP-205ENST00000447267 DPP7Q9UHL4 492 aa5.69□□□□□ -1.5
SDCBP-205ENST00000447267 TSC2P49815 1807 aa5.69□□□□□ -1.5
SDCBP-205ENST00000447267 SPENQ96T58 3664 aaKnown RBP5.69□□□□□ -1.5
SDCBP-205ENST00000447267 LRBAP50851 2863 aa5.69□□□□□ -1.5
SDCBP-205ENST00000447267 LOXHD1Q8IVV2 1947 aa5.68□□□□□ -1.5
SDCBP-205ENST00000447267 ABCA7Q8IZY2 2146 aa5.68□□□□□ -1.5
SDCBP-205ENST00000447267 OR14I1A6ND48 311 aa5.68□□□□□ -1.5
SDCBP-205ENST00000447267 SPECC1L-ADORA2AF8WAN1 911 aa5.68□□□□□ -1.5
SDCBP-205ENST00000447267 ZNF263O14978 683 aa5.68□□□□□ -1.5
SDCBP-205ENST00000447267 PLA2G6O60733 806 aa5.68□□□□□ -1.5
SDCBP-205ENST00000447267 TTLL1O95922 423 aa5.68□□□□□ -1.5
SDCBP-205ENST00000447267 CEBPBP17676 345 aa5.68□□□□□ -1.5
SDCBP-205ENST00000447267 ITGB6P18564 788 aa5.68□□□□□ -1.5
SDCBP-205ENST00000447267 VIPR1P32241 457 aa5.68□□□□□ -1.5
SDCBP-205ENST00000447267 ZNF165P49910 485 aa5.68□□□□□ -1.5
SDCBP-205ENST00000447267 TMPRSS3P57727 454 aa5.68□□□□□ -1.5
SDCBP-205ENST00000447267 YBX1P67809 324 aaKnown RBP5.68□□□□□ -1.5
SDCBP-205ENST00000447267 FANCCQ00597 558 aa5.68□□□□□ -1.5
SDCBP-205ENST00000447267 EXOSC9Q06265 439 aaKnown RBP5.68□□□□□ -1.5
SDCBP-205ENST00000447267 RAD51AP2Q09MP3 1159 aa5.68□□□□□ -1.5
SDCBP-205ENST00000447267 AUHQ13825 339 aaKnown RBP5.68□□□□□ -1.5
SDCBP-205ENST00000447267 KARSQ15046 597 aaKnown RBP5.68□□□□□ -1.5
SDCBP-205ENST00000447267 SLC5A9Q2M3M2 681 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms