RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 C2orf78A6NCI8 922 aa15.73■□□□□ 0.11
HDAC4-204ENST00000446876 PMM2O15305 246 aa15.73■□□□□ 0.11
HDAC4-204ENST00000446876 NPR3P17342 541 aa15.73■□□□□ 0.11
HDAC4-204ENST00000446876 COL9A1P20849 921 aa15.73■□□□□ 0.11
HDAC4-204ENST00000446876 GDI1P31150 447 aa15.73■□□□□ 0.11
HDAC4-204ENST00000446876 MAP3K7CLP57077 242 aa15.73■□□□□ 0.11
HDAC4-204ENST00000446876 PPP1R26Q5T8A7 1209 aaPredicted RBP15.73■□□□□ 0.11
HDAC4-204ENST00000446876 CWF19L1Q69YN2 538 aaKnown RBP15.73■□□□□ 0.11
HDAC4-204ENST00000446876 ARHGEF19Q8IW93 802 aa15.73■□□□□ 0.11
HDAC4-204ENST00000446876 SUGP1Q8IWZ8 645 aaKnown RBP15.73■□□□□ 0.11
HDAC4-204ENST00000446876 CMTM8Q8IZV2 173 aa15.73■□□□□ 0.11
HDAC4-204ENST00000446876 UBR7Q8N806 425 aa15.73■□□□□ 0.11
HDAC4-204ENST00000446876 SLC4A11Q8NBS3 891 aa15.73■□□□□ 0.11
HDAC4-204ENST00000446876 FLCNQ8NFG4 579 aa15.73■□□□□ 0.11
HDAC4-204ENST00000446876 SCAMP5Q8TAC9 235 aa15.73■□□□□ 0.11
HDAC4-204ENST00000446876 CYFIP2Q96F07 1278 aa15.73■□□□□ 0.11
HDAC4-204ENST00000446876 NT5C1BQ96P26 610 aa15.73■□□□□ 0.11
HDAC4-204ENST00000446876 SLC22A12Q96S37 553 aa15.73■□□□□ 0.11
HDAC4-204ENST00000446876 TTLL2Q9BWV7 592 aa15.73■□□□□ 0.11
HDAC4-204ENST00000446876 INTS2Q9H0H0 1204 aaKnown RBP15.73■□□□□ 0.11
HDAC4-204ENST00000446876 MFSD1Q9H3U5 465 aa15.73■□□□□ 0.11
HDAC4-204ENST00000446876 ARHGEF3Q9NR81 526 aa15.73■□□□□ 0.11
HDAC4-204ENST00000446876 WNT16Q9UBV4 365 aa15.73■□□□□ 0.11
HDAC4-204ENST00000446876 DACH1Q9UI36 760 aa15.73■□□□□ 0.11
HDAC4-204ENST00000446876 CCL26Q9Y258 94 aa15.73■□□□□ 0.11
HDAC4-204ENST00000446876 ZDBF2Q9HCK1 2354 aa15.73■□□□□ 0.11
HDAC4-204ENST00000446876 DPYSL4O14531 572 aa15.72■□□□□ 0.11
HDAC4-204ENST00000446876 P4HA2O15460 535 aa15.72■□□□□ 0.11
HDAC4-204ENST00000446876 FAM200BP0CF97 657 aa15.72■□□□□ 0.11
HDAC4-204ENST00000446876 PSMC3P17980 439 aa15.72■□□□□ 0.11
HDAC4-204ENST00000446876 ERCC5P28715 1186 aaPredicted RBP15.72■□□□□ 0.11
HDAC4-204ENST00000446876 MTIF2P46199 727 aaKnown RBP15.72■□□□□ 0.11
HDAC4-204ENST00000446876 SLC5A3P53794 718 aa15.72■□□□□ 0.11
HDAC4-204ENST00000446876 TAF10Q12962 218 aa15.72■□□□□ 0.11
HDAC4-204ENST00000446876 CCDC183Q5T5S1 534 aa15.72■□□□□ 0.11
HDAC4-204ENST00000446876 CLEC20AQ6ZU45 233 aa15.72■□□□□ 0.11
HDAC4-204ENST00000446876 C11orf57Q6ZUT1 292 aaPredicted RBP15.72■□□□□ 0.11
HDAC4-204ENST00000446876 RRAGAQ7L523 313 aa15.72■□□□□ 0.11
HDAC4-204ENST00000446876 GPRIN1Q7Z2K8 1008 aa15.72■□□□□ 0.11
HDAC4-204ENST00000446876 MON1AQ86VX9 555 aa15.72■□□□□ 0.11
HDAC4-204ENST00000446876 MFSD6LQ8IWD5 586 aa15.72■□□□□ 0.11
HDAC4-204ENST00000446876 NUP93Q8N1F7 819 aa15.72■□□□□ 0.11
HDAC4-204ENST00000446876 PPM1KQ8N3J5 372 aa15.72■□□□□ 0.11
HDAC4-204ENST00000446876 RIN3Q8TB24 985 aa15.72■□□□□ 0.11
HDAC4-204ENST00000446876 USP13Q92995 863 aaPredicted RBP15.72■□□□□ 0.11
HDAC4-204ENST00000446876 TMEM176AQ96HP8 235 aa15.72■□□□□ 0.11
HDAC4-204ENST00000446876 FAXDC2Q96IV6 333 aa15.72■□□□□ 0.11
HDAC4-204ENST00000446876 CEP295NLQ96MC4 621 aa15.72■□□□□ 0.11
HDAC4-204ENST00000446876 HEXIM2Q96MH2 286 aaKnown RBP15.72■□□□□ 0.11
HDAC4-204ENST00000446876 CYP2S1Q96SQ9 504 aa15.72■□□□□ 0.11
HDAC4-204ENST00000446876 HNRNPABQ99729 332 aaKnown RBP15.72■□□□□ 0.11
HDAC4-204ENST00000446876 CRACR2AQ9BSW2 395 aa15.72■□□□□ 0.11
HDAC4-204ENST00000446876 TRMT61BQ9BVS5 477 aaKnown RBP15.72■□□□□ 0.11
HDAC4-204ENST00000446876 BRD9Q9H8M2 597 aa15.72■□□□□ 0.11
HDAC4-204ENST00000446876 TMEM63CQ9P1W3 806 aa15.72■□□□□ 0.11
HDAC4-204ENST00000446876 TNFRSF10BO14763 440 aa15.71■□□□□ 0.11
HDAC4-204ENST00000446876 ABL1P00519 1130 aa15.71■□□□□ 0.11
HDAC4-204ENST00000446876 CALCAP01258 141 aa15.71■□□□□ 0.11
HDAC4-204ENST00000446876 TRIM21P19474 475 aaKnown RBP15.71■□□□□ 0.11
HDAC4-204ENST00000446876 DDX6P26196 483 aaKnown RBP eCLIP15.71■□□□□ 0.114e-7■■■□□ 14.7
HDAC4-204ENST00000446876 AVPR1AP37288 418 aa15.71■□□□□ 0.11
HDAC4-204ENST00000446876 APBA1Q02410 837 aa15.71■□□□□ 0.11
HDAC4-204ENST00000446876 CETN1Q12798 172 aa15.71■□□□□ 0.11
HDAC4-204ENST00000446876 ARL14EPQ8N8R7 260 aaPredicted RBP15.71■□□□□ 0.11
HDAC4-204ENST00000446876 EHBP1Q8NDI1 1231 aa15.71■□□□□ 0.11
HDAC4-204ENST00000446876 TTC16Q8NEE8 873 aa15.71■□□□□ 0.11
HDAC4-204ENST00000446876 DEPDC1BQ8WUY9 529 aa15.71■□□□□ 0.11
HDAC4-204ENST00000446876 FBXO32Q969P5 355 aa15.71■□□□□ 0.11
HDAC4-204ENST00000446876 ZFYVE19Q96K21 471 aa15.71■□□□□ 0.11
HDAC4-204ENST00000446876 THAP9Q9H5L6 903 aa15.71■□□□□ 0.11
HDAC4-204ENST00000446876 TBC1D17Q9HA65 648 aa15.71■□□□□ 0.11
HDAC4-204ENST00000446876 CSNK1G1Q9HCP0 422 aa15.71■□□□□ 0.11
HDAC4-204ENST00000446876 HEBP1Q9NRV9 189 aa15.71■□□□□ 0.11
HDAC4-204ENST00000446876 SAMSN1Q9NSI8 373 aaKnown RBP15.71■□□□□ 0.11
HDAC4-204ENST00000446876 TRPM5Q9NZQ8 1165 aa15.71■□□□□ 0.11
HDAC4-204ENST00000446876 GCNT4Q9P109 453 aa15.71■□□□□ 0.11
HDAC4-204ENST00000446876 MIA3Q5JRA6 1907 aa15.7■□□□□ 0.1
HDAC4-204ENST00000446876 TRAV19A0A0A6YYK7 116 aa15.7■□□□□ 0.1
HDAC4-204ENST00000446876 ZNF840PA6NDX5 716 aa15.7■□□□□ 0.1
HDAC4-204ENST00000446876 HHLA1C9JL84 531 aa15.7■□□□□ 0.1
HDAC4-204ENST00000446876 STK25O00506 426 aa15.7■□□□□ 0.1
HDAC4-204ENST00000446876 PI15O43692 258 aa15.7■□□□□ 0.1
HDAC4-204ENST00000446876 ACO1P21399 889 aaKnown RBP15.7■□□□□ 0.1
HDAC4-204ENST00000446876 TBXAS1P24557 533 aaPredicted RBP15.7■□□□□ 0.1
HDAC4-204ENST00000446876 YWHAQP27348 245 aa15.7■□□□□ 0.1
HDAC4-204ENST00000446876 FCHO2Q0JRZ9 810 aa15.7■□□□□ 0.1
HDAC4-204ENST00000446876 MLF2Q15773 248 aaPredicted RBP15.7■□□□□ 0.1
HDAC4-204ENST00000446876 SLC44A4Q53GD3 710 aa15.7■□□□□ 0.1
HDAC4-204ENST00000446876 SASS6Q6UVJ0 657 aa15.7■□□□□ 0.1
HDAC4-204ENST00000446876 YAF2Q8IY57 180 aa15.7■□□□□ 0.1
HDAC4-204ENST00000446876 TTC39CQ8N584 583 aa15.7■□□□□ 0.1
HDAC4-204ENST00000446876 TMEM105Q8N8V8 129 aa15.7■□□□□ 0.1
HDAC4-204ENST00000446876 E2F7Q96AV8 911 aa15.7■□□□□ 0.1
HDAC4-204ENST00000446876 KREMEN1Q96MU8 473 aa15.7■□□□□ 0.1
HDAC4-204ENST00000446876 FOXQ1Q9C009 403 aa15.7■□□□□ 0.1
HDAC4-204ENST00000446876 GMIPQ9P107 970 aa15.7■□□□□ 0.1
HDAC4-204ENST00000446876 PCDHB4Q9Y5E5 795 aa15.7■□□□□ 0.1
HDAC4-204ENST00000446876 RNF225M0QZC1 329 aaPredicted RBP15.69■□□□□ 0.1
HDAC4-204ENST00000446876 ARNTLO00327 626 aa15.69■□□□□ 0.1
HDAC4-204ENST00000446876 ZNF263O14978 683 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms