RNA–Protein interactions for RNA: ENST00000445623.1

TIMP1-204, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2

Gene TIMP1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-204ENST00000445623 SECISBP2LQ93073 1101 aaKnown RBP13.92□□□□□ -0.18
TIMP1-204ENST00000445623 GUCD1Q96NT3 240 aa13.92□□□□□ -0.18
TIMP1-204ENST00000445623 SMOQ99835 787 aa13.92□□□□□ -0.18
TIMP1-204ENST00000445623 UBXN6Q9BZV1 441 aa13.92□□□□□ -0.18
TIMP1-204ENST00000445623 MIS12Q9H081 205 aa13.92□□□□□ -0.18
TIMP1-204ENST00000445623 CRISPLD1Q9H336 500 aa13.92□□□□□ -0.18
TIMP1-204ENST00000445623 ASB3Q9Y575 518 aa13.92□□□□□ -0.18
TIMP1-204ENST00000445623 SSU72P8A0A1W2PR75 194 aa13.91□□□□□ -0.18
TIMP1-204ENST00000445623 NRDCO43847 1150 aa13.91□□□□□ -0.18
TIMP1-204ENST00000445623 POU2F2P09086 479 aa13.91□□□□□ -0.18
TIMP1-204ENST00000445623 CSH1P0DML2 217 aa13.91□□□□□ -0.18
TIMP1-204ENST00000445623 CSH2P0DML3 217 aa13.91□□□□□ -0.18
TIMP1-204ENST00000445623 SKILP12757 684 aa13.91□□□□□ -0.18
TIMP1-204ENST00000445623 HOXB8P17481 243 aaPredicted RBP13.91□□□□□ -0.18
TIMP1-204ENST00000445623 SSTR3P32745 418 aaPredicted RBP13.91□□□□□ -0.18
TIMP1-204ENST00000445623 GTF2F1P35269 517 aaKnown RBP eCLIP13.91□□□□□ -0.18
TIMP1-204ENST00000445623 PLA2G4AP47712 749 aa13.91□□□□□ -0.18
TIMP1-204ENST00000445623 ADAM15Q13444 863 aa13.91□□□□□ -0.18
TIMP1-204ENST00000445623 KCNC3Q14003 757 aa13.91□□□□□ -0.18
TIMP1-204ENST00000445623 DDR2Q16832 855 aa13.91□□□□□ -0.18
TIMP1-204ENST00000445623 HGSNATQ68CP4 663 aa13.91□□□□□ -0.18
TIMP1-204ENST00000445623 DENND1BQ6P3S1 775 aa13.91□□□□□ -0.18
TIMP1-204ENST00000445623 DENND5BQ6ZUT9 1274 aa13.91□□□□□ -0.18
TIMP1-204ENST00000445623 PASD1Q8IV76 773 aa13.91□□□□□ -0.18
TIMP1-204ENST00000445623 IPO4Q8TEX9 1081 aaKnown RBP13.91□□□□□ -0.18
TIMP1-204ENST00000445623 STK32AQ8WU08 396 aa13.91□□□□□ -0.18
TIMP1-204ENST00000445623 PABPC5Q96DU9 382 aaKnown RBP13.91□□□□□ -0.18
TIMP1-204ENST00000445623 HSFY1Q96LI6 401 aa13.91□□□□□ -0.18
TIMP1-204ENST00000445623 ZNF512Q96ME7 567 aaPredicted RBP13.91□□□□□ -0.18
TIMP1-204ENST00000445623 KCNK16Q96T55 309 aa13.91□□□□□ -0.18
TIMP1-204ENST00000445623 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.91□□□□□ -0.18
TIMP1-204ENST00000445623 LRRC4Q9HBW1 653 aa13.91□□□□□ -0.18
TIMP1-204ENST00000445623 CYLDQ9NQC7 956 aa13.91□□□□□ -0.18
TIMP1-204ENST00000445623 CLDND1Q9NY35 253 aa13.91□□□□□ -0.18
TIMP1-204ENST00000445623 PATJQ8NI35 1801 aa13.91□□□□□ -0.18
TIMP1-204ENST00000445623 SOAT2O75908 522 aa13.9□□□□□ -0.18
TIMP1-204ENST00000445623 RTN3O95197 1032 aaPredicted RBP13.9□□□□□ -0.18
TIMP1-204ENST00000445623 PTMAP06454 111 aaKnown RBP13.9□□□□□ -0.18
TIMP1-204ENST00000445623 CHRNB2P17787 502 aa13.9□□□□□ -0.18
TIMP1-204ENST00000445623 ATF6P18850 670 aa13.9□□□□□ -0.18
TIMP1-204ENST00000445623 CDH5P33151 784 aaPredicted RBP13.9□□□□□ -0.18
TIMP1-204ENST00000445623 GPD2P43304 727 aa13.9□□□□□ -0.18
TIMP1-204ENST00000445623 ACADSBP45954 432 aa13.9□□□□□ -0.18
TIMP1-204ENST00000445623 NSFP46459 744 aaKnown RBP13.9□□□□□ -0.18
TIMP1-204ENST00000445623 ANKRD54Q6NXT1 300 aa13.9□□□□□ -0.18
TIMP1-204ENST00000445623 CYP26C1Q6V0L0 522 aa13.9□□□□□ -0.18
TIMP1-204ENST00000445623 EP400NLQ6ZTU2 488 aa13.9□□□□□ -0.18
TIMP1-204ENST00000445623 ZNF571Q7Z3V5 609 aaPredicted RBP13.9□□□□□ -0.18
TIMP1-204ENST00000445623 PIGZQ86VD9 579 aa13.9□□□□□ -0.18
TIMP1-204ENST00000445623 NUP93Q8N1F7 819 aa13.9□□□□□ -0.18
TIMP1-204ENST00000445623 C1orf131Q8NDD1 294 aaKnown RBP13.9□□□□□ -0.18
TIMP1-204ENST00000445623 ZMIZ2Q8NF64 920 aa13.9□□□□□ -0.18
TIMP1-204ENST00000445623 CMASQ8NFW8 434 aaPredicted RBP13.9□□□□□ -0.18
TIMP1-204ENST00000445623 SLC35F5Q8WV83 523 aa13.9□□□□□ -0.18
TIMP1-204ENST00000445623 KCTD13Q8WZ19 329 aa13.9□□□□□ -0.18
TIMP1-204ENST00000445623 CCDC42Q96M95 316 aa13.9□□□□□ -0.18
TIMP1-204ENST00000445623 FBXO44Q9H4M3 255 aa13.9□□□□□ -0.18
TIMP1-204ENST00000445623 SYNCQ9H7C4 482 aa13.9□□□□□ -0.18
TIMP1-204ENST00000445623 PIDD1Q9HB75 910 aa13.9□□□□□ -0.18
TIMP1-204ENST00000445623 ST7Q9NRC1 585 aa13.9□□□□□ -0.18
TIMP1-204ENST00000445623 COMMD8Q9NX08 183 aa13.9□□□□□ -0.18
TIMP1-204ENST00000445623 UXTQ9UBK9 157 aaPredicted RBP13.9□□□□□ -0.18
TIMP1-204ENST00000445623 CCDC195A0A1B0GUA6 201 aa13.89□□□□□ -0.19
TIMP1-204ENST00000445623 SLC38A8A6NNN8 435 aa13.89□□□□□ -0.19
TIMP1-204ENST00000445623 CCL16O15467 120 aa13.89□□□□□ -0.19
TIMP1-204ENST00000445623 LINC01565O15544 149 aa13.89□□□□□ -0.19
TIMP1-204ENST00000445623 AKR1B10O60218 316 aa13.89□□□□□ -0.19
TIMP1-204ENST00000445623 BEST1O76090 585 aa13.89□□□□□ -0.19
TIMP1-204ENST00000445623 FGF19O95750 216 aa13.89□□□□□ -0.19
TIMP1-204ENST00000445623 GLP2RO95838 553 aa13.89□□□□□ -0.19
TIMP1-204ENST00000445623 CYP1A1P04798 512 aaPredicted RBP13.89□□□□□ -0.19
TIMP1-204ENST00000445623 EIF4A3P38919 411 aaKnown RBP13.89□□□□□ -0.19
TIMP1-204ENST00000445623 GPR15P49685 360 aa13.89□□□□□ -0.19
TIMP1-204ENST00000445623 SLC5A3P53794 718 aa13.89□□□□□ -0.19
TIMP1-204ENST00000445623 CACNA2D1P54289 1103 aa13.89□□□□□ -0.19
TIMP1-204ENST00000445623 NOMO3P69849 1222 aa13.89□□□□□ -0.19
TIMP1-204ENST00000445623 CCDC173Q0VFZ6 552 aa13.89□□□□□ -0.19
TIMP1-204ENST00000445623 PDCLQ13371 301 aa13.89□□□□□ -0.19
TIMP1-204ENST00000445623 MAPK8IP2Q13387 824 aaPredicted RBP13.89□□□□□ -0.19
TIMP1-204ENST00000445623 COL19A1Q14993 1142 aa13.89□□□□□ -0.19
TIMP1-204ENST00000445623 SKIV2LQ15477 1246 aaKnown RBP13.89□□□□□ -0.19
TIMP1-204ENST00000445623 CLEC16AQ2KHT3 1053 aa13.89□□□□□ -0.19
TIMP1-204ENST00000445623 CTC1Q2NKJ3 1217 aa13.89□□□□□ -0.19
TIMP1-204ENST00000445623 NAA35Q5VZE5 725 aa13.89□□□□□ -0.19
TIMP1-204ENST00000445623 WDR59Q6PJI9 974 aa13.89□□□□□ -0.19
TIMP1-204ENST00000445623 CCDC186Q7Z3E2 898 aa13.89□□□□□ -0.19
TIMP1-204ENST00000445623 TMTC1Q8IUR5 882 aa13.89□□□□□ -0.19
TIMP1-204ENST00000445623 SIX6OS1Q8N1H7 587 aa13.89□□□□□ -0.19
TIMP1-204ENST00000445623 LEMD2Q8NC56 503 aa13.89□□□□□ -0.19
TIMP1-204ENST00000445623 CCDC112Q8NEF3 446 aa13.89□□□□□ -0.19
TIMP1-204ENST00000445623 VN1R2Q8NFZ6 395 aa13.89□□□□□ -0.19
TIMP1-204ENST00000445623 GIPC2Q8TF65 315 aa13.89□□□□□ -0.19
TIMP1-204ENST00000445623 PSMG2Q969U7 264 aa13.89□□□□□ -0.19
TIMP1-204ENST00000445623 PDLIM2Q96JY6 352 aa13.89□□□□□ -0.19
TIMP1-204ENST00000445623 BAG1Q99933 345 aaPredicted RBP13.89□□□□□ -0.19
TIMP1-204ENST00000445623 SYT11Q9BT88 431 aa13.89□□□□□ -0.19
TIMP1-204ENST00000445623 PRKD2Q9BZL6 878 aa13.89□□□□□ -0.19
TIMP1-204ENST00000445623 NHEJ1Q9H9Q4 299 aaPredicted RBP13.89□□□□□ -0.19
TIMP1-204ENST00000445623 TMEM30AQ9NV96 361 aa13.89□□□□□ -0.19
TIMP1-204ENST00000445623 ARHGAP20Q9P2F6 1191 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms