RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 CLDN6P56747 220 aa7.01□□□□□ -1.29
BRAFP1-201ENST00000445336 HS1BP3Q53T59 392 aa7.01□□□□□ -1.29
BRAFP1-201ENST00000445336 NOTUMQ6P988 496 aa7.01□□□□□ -1.29
BRAFP1-201ENST00000445336 BHLHB9Q6PI77 547 aa7.01□□□□□ -1.29
BRAFP1-201ENST00000445336 GAREM2Q75VX8 874 aa7.01□□□□□ -1.29
BRAFP1-201ENST00000445336 PARS2Q7L3T8 475 aaKnown RBP7.01□□□□□ -1.29
BRAFP1-201ENST00000445336 OR4C6Q8NH72 309 aa7.01□□□□□ -1.29
BRAFP1-201ENST00000445336 USP13Q92995 863 aaPredicted RBP7.01□□□□□ -1.29
BRAFP1-201ENST00000445336 TOE1Q96GM8 510 aaKnown RBP7.01□□□□□ -1.29
BRAFP1-201ENST00000445336 MXRA8Q9BRK3 442 aa7.01□□□□□ -1.29
BRAFP1-201ENST00000445336 RIOX1Q9H6W3 641 aa7.01□□□□□ -1.29
BRAFP1-201ENST00000445336 ZNF316A6NFI3 1004 aaPredicted RBP7□□□□□ -1.29
BRAFP1-201ENST00000445336 BACH1O14867 736 aa7□□□□□ -1.29
BRAFP1-201ENST00000445336 KCNN4O15554 427 aa7□□□□□ -1.29
BRAFP1-201ENST00000445336 SPRY1O43609 319 aaPredicted RBP7□□□□□ -1.29
BRAFP1-201ENST00000445336 RTN2O75298 545 aa7□□□□□ -1.29
BRAFP1-201ENST00000445336 KIF4AO95239 1232 aa7□□□□□ -1.29
BRAFP1-201ENST00000445336 PSAPP07602 524 aa7□□□□□ -1.29
BRAFP1-201ENST00000445336 SMARCB1Q12824 385 aa7□□□□□ -1.29
BRAFP1-201ENST00000445336 BFSP1Q12934 665 aa7□□□□□ -1.29
BRAFP1-201ENST00000445336 C3orf38Q5JPI3 329 aa7□□□□□ -1.29
BRAFP1-201ENST00000445336 ZNF295-AS1Q8N0V1 137 aa7□□□□□ -1.29
BRAFP1-201ENST00000445336 C2orf15Q8WU43 125 aaKnown RBP7□□□□□ -1.29
BRAFP1-201ENST00000445336 ATXN3LQ9H3M9 355 aa7□□□□□ -1.29
BRAFP1-201ENST00000445336 RNF41Q9H4P4 317 aaPredicted RBP7□□□□□ -1.29
BRAFP1-201ENST00000445336 GDF3Q9NR23 364 aa7□□□□□ -1.29
BRAFP1-201ENST00000445336 TCEAL9Q9UHQ7 104 aa7□□□□□ -1.29
BRAFP1-201ENST00000445336 MYBPC2Q14324 1141 aa7□□□□□ -1.29
BRAFP1-201ENST00000445336 ZNF280DQ6N043 979 aa7□□□□□ -1.29
BRAFP1-201ENST00000445336 TTC30AQ86WT1 665 aa7□□□□□ -1.29
BRAFP1-201ENST00000445336 TP53INP2Q8IXH6 220 aa7□□□□□ -1.29
BRAFP1-201ENST00000445336 KBTBD3Q8NAB2 608 aa7□□□□□ -1.29
BRAFP1-201ENST00000445336 GSTCDQ8NEC7 633 aa7□□□□□ -1.29
BRAFP1-201ENST00000445336 RDM1Q8NG50 284 aa7□□□□□ -1.29
BRAFP1-201ENST00000445336 PDCD6IPQ8WUM4 868 aaKnown RBP7□□□□□ -1.29
BRAFP1-201ENST00000445336 OTUB2Q96DC9 234 aa7□□□□□ -1.29
BRAFP1-201ENST00000445336 UBA5Q9GZZ9 404 aa7□□□□□ -1.29
BRAFP1-201ENST00000445336 DNAJC25Q9H1X3 360 aa7□□□□□ -1.29
BRAFP1-201ENST00000445336 NXF3Q9H4D5 531 aaKnown RBP7□□□□□ -1.29
BRAFP1-201ENST00000445336 MIOSQ9NXC5 875 aa7□□□□□ -1.29
BRAFP1-201ENST00000445336 LAMA5O15230 3695 aa7□□□□□ -1.29
BRAFP1-201ENST00000445336 A0A1B0GUH1 482 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 A0A1W2PNU3 283 aaPredicted RBP6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 ALPPL2P10696 532 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 AGAP20933 346 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 AVPR1AP37288 418 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 MLH1P40692 756 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 CSNK1EP49674 416 aaKnown RBP6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 FGL2Q14314 439 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 PCOLCEQ15113 449 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 TARBP2Q15633 366 aaKnown RBP6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 CEP135Q66GS9 1140 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 DEFB119Q8N690 84 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 ABHD17AQ96GS6 310 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 SLC45A3Q96JT2 553 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 MRGPRX1Q96LB2 322 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 AGAP3Q96P47 875 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 IL21Q9HBE4 155 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 AGO4Q9HCK5 861 aaKnown RBP6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 TBC1D22BQ9NU19 505 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 APCP25054 2843 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 TRIM6-TRIM34B2RNG4 842 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 NMT2O60551 498 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 CBX6O95503 412 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 APPP05067 770 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 PROZP22891 400 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 ZBTB16Q05516 673 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 MTFR2Q6P444 385 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 PNMA1Q8ND90 353 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 LRRN4CLQ8ND94 238 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 KIF1BPQ96EK5 621 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 IFT43Q96FT9 208 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 STRADBQ9C0K7 418 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 INTS2Q9H0H0 1204 aaKnown RBP6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 GSX1Q9H4S2 264 aaPredicted RBP6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 KAT14Q9H8E8 782 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 TMEM63CQ9P1W3 806 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 OR6C75A6NL08 312 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 KRT19P08727 400 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 USP17L7P0C7H9 530 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 SRGAP2CP0DJJ0 459 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 ATP4AP20648 1035 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 MLLT10P55197 1068 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 SEC13P55735 322 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 SFSWAPQ12872 951 aaKnown RBP6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 CCDC60Q8IWA6 550 aaPredicted RBP6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 DUSP23Q9BVJ7 150 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 SLC46A2Q9BY10 475 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 MIR1-1HGQ9H1L0 117 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 SGK2Q9HBY8 427 aa6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 EIF2B4Q9UI10 523 aaKnown RBP6.99□□□□□ -1.29
BRAFP1-201ENST00000445336 TTLL8A6PVC2 850 aa6.98□□□□□ -1.29
BRAFP1-201ENST00000445336 PLD2O14939 933 aa6.98□□□□□ -1.29
BRAFP1-201ENST00000445336 RAB11FIP3O75154 756 aa6.98□□□□□ -1.29
BRAFP1-201ENST00000445336 OATP04181 439 aa6.98□□□□□ -1.29
BRAFP1-201ENST00000445336 HOXA11P31270 313 aaPredicted RBP6.98□□□□□ -1.29
BRAFP1-201ENST00000445336 CCKBRP32239 447 aa6.98□□□□□ -1.29
BRAFP1-201ENST00000445336 GRIK1P39086 918 aa6.98□□□□□ -1.29
BRAFP1-201ENST00000445336 FOXD4Q12950 439 aaPredicted RBP6.98□□□□□ -1.29
BRAFP1-201ENST00000445336 ENPP2Q13822 863 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms