RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 TRAV19A0A0A6YYK7 116 aa12.97□□□□□ -0.33
LTBR-204ENST00000444814 KRT5P13647 590 aa12.97□□□□□ -0.33
LTBR-204ENST00000444814 CCDC130P13994 396 aa12.97□□□□□ -0.33
LTBR-204ENST00000444814 NPR3P17342 541 aa12.97□□□□□ -0.33
LTBR-204ENST00000444814 BCAT1P54687 386 aa12.97□□□□□ -0.33
LTBR-204ENST00000444814 SLC5A9Q2M3M2 681 aa12.97□□□□□ -0.33
LTBR-204ENST00000444814 FILIP1LQ4L180 1135 aa12.97□□□□□ -0.33
LTBR-204ENST00000444814 TRIM65Q6PJ69 517 aa12.97□□□□□ -0.33
LTBR-204ENST00000444814 FUKQ8N0W3 1084 aa12.97□□□□□ -0.33
LTBR-204ENST00000444814 FBXO32Q969P5 355 aa12.97□□□□□ -0.33
LTBR-204ENST00000444814 SHDQ96IW2 340 aa12.97□□□□□ -0.33
LTBR-204ENST00000444814 ASB16Q96NS5 453 aa12.97□□□□□ -0.33
LTBR-204ENST00000444814 TTLL2Q9BWV7 592 aa12.97□□□□□ -0.33
LTBR-204ENST00000444814 LRRC3Q9BY71 257 aa12.97□□□□□ -0.33
LTBR-204ENST00000444814 UBXN6Q9BZV1 441 aa12.97□□□□□ -0.33
LTBR-204ENST00000444814 TRPV4Q9HBA0 871 aa12.97□□□□□ -0.33
LTBR-204ENST00000444814 CSNK1G1Q9HCP0 422 aa12.97□□□□□ -0.33
LTBR-204ENST00000444814 UBE2TQ9NPD8 197 aaPredicted RBP12.97□□□□□ -0.33
LTBR-204ENST00000444814 CD320Q9NPF0 282 aa12.97□□□□□ -0.33
LTBR-204ENST00000444814 NUMBLQ9Y6R0 609 aa12.97□□□□□ -0.33
LTBR-204ENST00000444814 DENND4AQ7Z401 1863 aa12.96□□□□□ -0.33
LTBR-204ENST00000444814 CLDN5O00501 218 aa12.96□□□□□ -0.33
LTBR-204ENST00000444814 USP17L7P0C7H9 530 aa12.96□□□□□ -0.33
LTBR-204ENST00000444814 SETSIPP0DME0 302 aa12.96□□□□□ -0.33
LTBR-204ENST00000444814 HMGA1P17096 107 aaKnown RBP12.96□□□□□ -0.33
LTBR-204ENST00000444814 GPR15P49685 360 aa12.96□□□□□ -0.33
LTBR-204ENST00000444814 PSEN1P49768 467 aa12.96□□□□□ -0.33
LTBR-204ENST00000444814 ZNF165P49910 485 aa12.96□□□□□ -0.33
LTBR-204ENST00000444814 RAD23BP54727 409 aa12.96□□□□□ -0.33
LTBR-204ENST00000444814 BPIFB4P59827 614 aa12.96□□□□□ -0.33
LTBR-204ENST00000444814 ANO6Q4KMQ2 910 aa12.96□□□□□ -0.33
LTBR-204ENST00000444814 TMEM31Q5JXX7 168 aa12.96□□□□□ -0.33
LTBR-204ENST00000444814 MON1AQ86VX9 555 aa12.96□□□□□ -0.33
LTBR-204ENST00000444814 DDX42Q86XP3 938 aaKnown RBP eCLIP12.96□□□□□ -0.33
LTBR-204ENST00000444814 IRF2BP1Q8IU81 584 aa12.96□□□□□ -0.33
LTBR-204ENST00000444814 FMNL3Q8IVF7 1028 aa12.96□□□□□ -0.33
LTBR-204ENST00000444814 ARHGAP18Q8N392 663 aa12.96□□□□□ -0.33
LTBR-204ENST00000444814 SLC44A3Q8N4M1 653 aa12.96□□□□□ -0.33
LTBR-204ENST00000444814 CELF5Q8N6W0 485 aaKnown RBP12.96□□□□□ -0.33
LTBR-204ENST00000444814 GPR152Q8TDT2 470 aa12.96□□□□□ -0.33
LTBR-204ENST00000444814 EXOC4Q96A65 974 aa12.96□□□□□ -0.33
LTBR-204ENST00000444814 TCEAL4Q96EI5 215 aa12.96□□□□□ -0.33
LTBR-204ENST00000444814 PHF12Q96QT6 1004 aa12.96□□□□□ -0.33
LTBR-204ENST00000444814 CDK5RAP1Q96SZ6 601 aaKnown RBP12.96□□□□□ -0.33
LTBR-204ENST00000444814 TRMT61BQ9BVS5 477 aaKnown RBP12.96□□□□□ -0.33
LTBR-204ENST00000444814 DUSP16Q9BY84 665 aa12.96□□□□□ -0.33
LTBR-204ENST00000444814 MFSD1Q9H3U5 465 aa12.96□□□□□ -0.33
LTBR-204ENST00000444814 SAMSN1Q9NSI8 373 aaKnown RBP12.96□□□□□ -0.33
LTBR-204ENST00000444814 HMGXB4Q9UGU5 601 aa12.96□□□□□ -0.33
LTBR-204ENST00000444814 NCANO14594 1321 aa12.95□□□□□ -0.34
LTBR-204ENST00000444814 GOLGA6L19H0YKK7 550 aa12.95□□□□□ -0.34
LTBR-204ENST00000444814 F11P03951 625 aa12.95□□□□□ -0.34
LTBR-204ENST00000444814 ASGR2P07307 311 aa12.95□□□□□ -0.34
LTBR-204ENST00000444814 PSMC3P17980 439 aa12.95□□□□□ -0.34
LTBR-204ENST00000444814 SLC5A3P53794 718 aa12.95□□□□□ -0.34
LTBR-204ENST00000444814 MAP3K7CLP57077 242 aa12.95□□□□□ -0.34
LTBR-204ENST00000444814 SNX16P57768 344 aa12.95□□□□□ -0.34
LTBR-204ENST00000444814 GOLGA8FQ08AF8 430 aa12.95□□□□□ -0.34
LTBR-204ENST00000444814 GOLGA8DPQ0D2H9 430 aa12.95□□□□□ -0.34
LTBR-204ENST00000444814 FAM78AQ5JUQ0 283 aa12.95□□□□□ -0.34
LTBR-204ENST00000444814 SDHAF4Q5VUM1 108 aa12.95□□□□□ -0.34
LTBR-204ENST00000444814 CDKAL1Q5VV42 579 aa12.95□□□□□ -0.34
LTBR-204ENST00000444814 CC2D1AQ6P1N0 951 aaPredicted RBP12.95□□□□□ -0.34
LTBR-204ENST00000444814 C1orf228Q6PIY5 440 aa12.95□□□□□ -0.34
LTBR-204ENST00000444814 TRIM67Q6ZTA4 783 aa12.95□□□□□ -0.34
LTBR-204ENST00000444814 C11orf57Q6ZUT1 292 aaPredicted RBP12.95□□□□□ -0.34
LTBR-204ENST00000444814 GAREM2Q75VX8 874 aa12.95□□□□□ -0.34
LTBR-204ENST00000444814 RRAGAQ7L523 313 aa12.95□□□□□ -0.34
LTBR-204ENST00000444814 CMTM8Q8IZV2 173 aa12.95□□□□□ -0.34
LTBR-204ENST00000444814 C12orf29Q8N999 325 aa12.95□□□□□ -0.34
LTBR-204ENST00000444814 ANKRD52Q8NB46 1076 aa12.95□□□□□ -0.34
LTBR-204ENST00000444814 SLC4A11Q8NBS3 891 aa12.95□□□□□ -0.34
LTBR-204ENST00000444814 RBBP8NLQ8NC74 664 aaPredicted RBP12.95□□□□□ -0.34
LTBR-204ENST00000444814 LMO3Q8TAP4 145 aa12.95□□□□□ -0.34
LTBR-204ENST00000444814 WHAMMQ8TF30 809 aa12.95□□□□□ -0.34
LTBR-204ENST00000444814 IRF7Q92985 503 aa12.95□□□□□ -0.34
LTBR-204ENST00000444814 ELMO3Q96BJ8 720 aa12.95□□□□□ -0.34
LTBR-204ENST00000444814 PCMTD1Q96MG8 357 aaPredicted RBP12.95□□□□□ -0.34
LTBR-204ENST00000444814 MED15Q96RN5 788 aa12.95□□□□□ -0.34
LTBR-204ENST00000444814 CRACR2AQ9BSW2 395 aa12.95□□□□□ -0.34
LTBR-204ENST00000444814 NACA2Q9H009 215 aa12.95□□□□□ -0.34
LTBR-204ENST00000444814 SLC24A3Q9HC58 644 aa12.95□□□□□ -0.34
LTBR-204ENST00000444814 TRPC7Q9HCX4 862 aa12.95□□□□□ -0.34
LTBR-204ENST00000444814 ZNF334Q9HCZ1 680 aaPredicted RBP12.95□□□□□ -0.34
LTBR-204ENST00000444814 SLC2A4RGQ9NR83 387 aa12.95□□□□□ -0.34
LTBR-204ENST00000444814 TLR8Q9NR97 1041 aaKnown RBP12.95□□□□□ -0.34
LTBR-204ENST00000444814 FANCLQ9NW38 375 aa12.95□□□□□ -0.34
LTBR-204ENST00000444814 WNT16Q9UBV4 365 aa12.95□□□□□ -0.34
LTBR-204ENST00000444814 CEP83Q9Y592 693 aa12.95□□□□□ -0.34
LTBR-204ENST00000444814 NME7Q9Y5B8 376 aa12.95□□□□□ -0.34
LTBR-204ENST00000444814 ZNF263O14978 683 aa12.94□□□□□ -0.34
LTBR-204ENST00000444814 ABL1P00519 1130 aa12.94□□□□□ -0.34
LTBR-204ENST00000444814 CKMP06732 381 aa12.94□□□□□ -0.34
LTBR-204ENST00000444814 USP8P40818 1118 aa12.94□□□□□ -0.34
LTBR-204ENST00000444814 CCR2P41597 374 aa12.94□□□□□ -0.34
LTBR-204ENST00000444814 PTK2Q05397 1052 aa12.94□□□□□ -0.34
LTBR-204ENST00000444814 BST2Q10589 180 aaKnown RBP12.94□□□□□ -0.34
LTBR-204ENST00000444814 IFRD2Q12894 506 aaPredicted RBP12.94□□□□□ -0.34
LTBR-204ENST00000444814 ORC1Q13415 861 aa12.94□□□□□ -0.34
LTBR-204ENST00000444814 ZNF268Q14587 947 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms