RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 LMNAP02545 664 aaKnown RBP9.33□□□□□ -0.92
USP6NL-203ENST00000443016 CKMP06732 381 aa9.33□□□□□ -0.92
USP6NL-203ENST00000443016 WARSP23381 471 aaKnown RBP9.33□□□□□ -0.92
USP6NL-203ENST00000443016 BDNFP23560 247 aa9.33□□□□□ -0.92
USP6NL-203ENST00000443016 DDX6P26196 483 aaKnown RBP eCLIP9.33□□□□□ -0.92
USP6NL-203ENST00000443016 ERCC5P28715 1186 aaPredicted RBP9.33□□□□□ -0.92
USP6NL-203ENST00000443016 SOX9P48436 509 aa9.33□□□□□ -0.92
USP6NL-203ENST00000443016 AP3M2P53677 418 aa9.33□□□□□ -0.92
USP6NL-203ENST00000443016 ZNF445P59923 1031 aa9.33□□□□□ -0.92
USP6NL-203ENST00000443016 KCNB1Q14721 858 aa9.33□□□□□ -0.92
USP6NL-203ENST00000443016 TCEAL1Q15170 157 aa9.33□□□□□ -0.92
USP6NL-203ENST00000443016 ATRIPQ8WXE1 791 aa9.33□□□□□ -0.92
USP6NL-203ENST00000443016 CLDN23Q96B33 292 aa9.33□□□□□ -0.92
USP6NL-203ENST00000443016 LRRC3BQ96PB8 259 aa9.33□□□□□ -0.92
USP6NL-203ENST00000443016 MRPL45Q9BRJ2 306 aaKnown RBP9.33□□□□□ -0.92
USP6NL-203ENST00000443016 C8orf33Q9H7E9 229 aaPredicted RBP9.33□□□□□ -0.92
USP6NL-203ENST00000443016 LMAN1LQ9HAT1 526 aa9.33□□□□□ -0.92
USP6NL-203ENST00000443016 TDP1Q9NUW8 608 aa9.33□□□□□ -0.92
USP6NL-203ENST00000443016 ANO10Q9NW15 660 aa9.33□□□□□ -0.92
USP6NL-203ENST00000443016 MAPK8IP1Q9UQF2 711 aa9.33□□□□□ -0.92
USP6NL-203ENST00000443016 PDXKO00764 312 aa9.33□□□□□ -0.92
USP6NL-203ENST00000443016 F11P03951 625 aa9.33□□□□□ -0.92
USP6NL-203ENST00000443016 NR3C1P04150 777 aa9.33□□□□□ -0.92
USP6NL-203ENST00000443016 ATICP31939 592 aa9.33□□□□□ -0.92
USP6NL-203ENST00000443016 MTAPQ13126 283 aa9.33□□□□□ -0.92
USP6NL-203ENST00000443016 PPP2R5DQ14738 602 aa9.33□□□□□ -0.92
USP6NL-203ENST00000443016 ZNF699Q32M78 642 aa9.33□□□□□ -0.92
USP6NL-203ENST00000443016 MDH1BQ5I0G3 518 aa9.33□□□□□ -0.92
USP6NL-203ENST00000443016 FAM171BQ6P995 826 aa9.33□□□□□ -0.92
USP6NL-203ENST00000443016 VSTM1Q6UX27 236 aa9.33□□□□□ -0.92
USP6NL-203ENST00000443016 MYCBPAPQ8TBZ2 947 aa9.33□□□□□ -0.92
USP6NL-203ENST00000443016 PARD3BQ8TEW8 1205 aa9.33□□□□□ -0.92
USP6NL-203ENST00000443016 ZNF516Q92618 1163 aa9.33□□□□□ -0.92
USP6NL-203ENST00000443016 MSANTD3Q96H12 275 aa9.33□□□□□ -0.92
USP6NL-203ENST00000443016 PCED1BQ96HM7 432 aa9.33□□□□□ -0.92
USP6NL-203ENST00000443016 PKMYT1Q99640 499 aa9.33□□□□□ -0.92
USP6NL-203ENST00000443016 CRTAC1Q9NQ79 661 aa9.33□□□□□ -0.92
USP6NL-203ENST00000443016 FBXO4Q9UKT5 387 aa9.33□□□□□ -0.92
USP6NL-203ENST00000443016 DMXL1Q9Y485 3027 aa9.33□□□□□ -0.92
USP6NL-203ENST00000443016 MIA3Q5JRA6 1907 aa9.33□□□□□ -0.92
USP6NL-203ENST00000443016 TLDC2A0PJX2 215 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 LRRIQ3A6PVS8 624 aaPredicted RBP9.32□□□□□ -0.92
USP6NL-203ENST00000443016 SPECC1L-ADORA2AF8WAN1 911 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 ARNTLO00327 626 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 CALUO43852 315 aaPredicted RBP9.32□□□□□ -0.92
USP6NL-203ENST00000443016 CREB3O43889 395 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 TACC1O75410 805 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 CAVIN2O95810 425 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 WEE1P30291 646 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 PPP1R2P41236 205 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 MAGEA11P43364 429 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 TYRO3Q06418 890 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 TNK2Q07912 1038 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 STIM1Q13586 685 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 NCOA4Q13772 614 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 ZNF667Q5HYK9 610 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 LRSAM1Q6UWE0 723 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 SCARA5Q6ZMJ2 495 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 DENND5BQ6ZUT9 1274 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 TMEM150AQ86TG1 271 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 MON1AQ86VX9 555 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 ADSSL1Q8N142 457 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 STK32AQ8WU08 396 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 TRMT2BQ96GJ1 504 aaKnown RBP9.32□□□□□ -0.92
USP6NL-203ENST00000443016 MYRFLQ96LU7 910 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 TMUB1Q9BVT8 246 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 NAT10Q9H0A0 1025 aaKnown RBP9.32□□□□□ -0.92
USP6NL-203ENST00000443016 GKN1Q9NS71 199 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 EHD2Q9NZN4 543 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 CCL26Q9Y258 94 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 OTOGLQ3ZCN5 2332 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 TRAV19A0A0A6YYK7 116 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 NOL4O94818 638 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 ABL1P00519 1130 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 P4HA1P13674 534 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 CTHP32929 405 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 MLLT6P55198 1093 aaPredicted RBP9.32□□□□□ -0.92
USP6NL-203ENST00000443016 IFRD2Q12894 506 aaPredicted RBP9.32□□□□□ -0.92
USP6NL-203ENST00000443016 LRRC32Q14392 662 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 ITPRIPL2Q3MIP1 535 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 TDRD10Q5VZ19 366 aaKnown RBP9.32□□□□□ -0.92
USP6NL-203ENST00000443016 TSSK4Q6SA08 328 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 LIMS2Q7Z4I7 341 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 RALGPS2Q86X27 583 aaPredicted RBP9.32□□□□□ -0.92
USP6NL-203ENST00000443016 SLC9A9Q8IVB4 645 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 SPATA20Q8TB22 786 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 ERCC4Q92889 916 aaPredicted RBP9.32□□□□□ -0.92
USP6NL-203ENST00000443016 USP13Q92995 863 aaPredicted RBP9.32□□□□□ -0.92
USP6NL-203ENST00000443016 SPOCK3Q9BQ16 436 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 KCTD10Q9H3F6 313 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 TSPY26PQ9H489 355 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 KIF9Q9HAQ2 790 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 MAN1B1Q9UKM7 699 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 DNAH14Q0VDD8 3507 aa9.32□□□□□ -0.92
USP6NL-203ENST00000443016 SHISA7A6NL88 538 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 F8VP50 259 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 BIN1O00499 593 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 RHOBTB3O94955 611 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 PTPN1P18031 435 aaKnown RBP9.31□□□□□ -0.92
USP6NL-203ENST00000443016 NR2F2P24468 414 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms