RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 CCDC82Q8N4S0 544 aa7.9□□□□□ -1.14
SSXP3-201ENST00000442971 KBTBD3Q8NAB2 608 aa7.9□□□□□ -1.14
SSXP3-201ENST00000442971 GLIS1Q8NBF1 620 aa7.9□□□□□ -1.14
SSXP3-201ENST00000442971 LRRN4CLQ8ND94 238 aa7.9□□□□□ -1.14
SSXP3-201ENST00000442971 TTC16Q8NEE8 873 aa7.9□□□□□ -1.14
SSXP3-201ENST00000442971 IPO4Q8TEX9 1081 aaKnown RBP7.9□□□□□ -1.14
SSXP3-201ENST00000442971 SNX19Q92543 992 aa7.9□□□□□ -1.14
SSXP3-201ENST00000442971 WNT2BQ93097 391 aa7.9□□□□□ -1.14
SSXP3-201ENST00000442971 CCDC51Q96ER9 411 aa7.9□□□□□ -1.14
SSXP3-201ENST00000442971 SEC62Q99442 399 aaKnown RBP7.9□□□□□ -1.14
SSXP3-201ENST00000442971 CD248Q9HCU0 757 aa7.9□□□□□ -1.14
SSXP3-201ENST00000442971 PTPRHQ9HD43 1115 aa7.9□□□□□ -1.14
SSXP3-201ENST00000442971 NSD1Q96L73 2696 aaPredicted RBP7.9□□□□□ -1.15
SSXP3-201ENST00000442971 DENND4CQ5VZ89 1909 aa7.9□□□□□ -1.15
SSXP3-201ENST00000442971 DOCK9Q9BZ29 2069 aa7.89□□□□□ -1.15
SSXP3-201ENST00000442971 MAP1AP78559 2803 aaPredicted RBP7.89□□□□□ -1.15
SSXP3-201ENST00000442971 IGKV6-21A0A0C4DH24 114 aa7.89□□□□□ -1.15
SSXP3-201ENST00000442971 BTBD18B2RXH4 712 aa7.89□□□□□ -1.15
SSXP3-201ENST00000442971 PTGESO14684 152 aa7.89□□□□□ -1.15
SSXP3-201ENST00000442971 FOXP2O15409 715 aa7.89□□□□□ -1.15
SSXP3-201ENST00000442971 MAP3K7O43318 606 aa7.89□□□□□ -1.15
SSXP3-201ENST00000442971 NFATC1O95644 943 aa7.89□□□□□ -1.15
SSXP3-201ENST00000442971 PSAPP07602 524 aa7.89□□□□□ -1.15
SSXP3-201ENST00000442971 CPB1P15086 417 aa7.89□□□□□ -1.15
SSXP3-201ENST00000442971 AXLP30530 894 aa7.89□□□□□ -1.15
SSXP3-201ENST00000442971 LTBQ06643 244 aa7.89□□□□□ -1.15
SSXP3-201ENST00000442971 MRPL58Q14197 206 aaKnown RBP7.89□□□□□ -1.15
SSXP3-201ENST00000442971 ZNF268Q14587 947 aaPredicted RBP7.89□□□□□ -1.15
SSXP3-201ENST00000442971 TARBP2Q15633 366 aaKnown RBP7.89□□□□□ -1.15
SSXP3-201ENST00000442971 NAB2Q15742 525 aa7.89□□□□□ -1.15
SSXP3-201ENST00000442971 SLC35G1Q2M3R5 365 aa7.89□□□□□ -1.15
SSXP3-201ENST00000442971 CTXN3Q4LDR2 81 aa7.89□□□□□ -1.15
SSXP3-201ENST00000442971 LACTB2Q53H82 288 aaPredicted RBP7.89□□□□□ -1.15
SSXP3-201ENST00000442971 ADAT2Q7Z6V5 191 aaKnown RBP7.89□□□□□ -1.15
SSXP3-201ENST00000442971 VASH2Q86V25 355 aa7.89□□□□□ -1.15
SSXP3-201ENST00000442971 TEX19Q8NA77 164 aa7.89□□□□□ -1.15
SSXP3-201ENST00000442971 CCER1Q8TC90 406 aaPredicted RBP7.89□□□□□ -1.15
SSXP3-201ENST00000442971 ATXN7L3BQ96GX2 97 aa7.89□□□□□ -1.15
SSXP3-201ENST00000442971 CPB2Q96IY4 423 aa7.89□□□□□ -1.15
SSXP3-201ENST00000442971 C5orf34Q96MH7 638 aa7.89□□□□□ -1.15
SSXP3-201ENST00000442971 LINC00597Q9H2U6 94 aa7.89□□□□□ -1.15
SSXP3-201ENST00000442971 CRISPLD1Q9H336 500 aa7.89□□□□□ -1.15
SSXP3-201ENST00000442971 RIOX1Q9H6W3 641 aa7.89□□□□□ -1.15
SSXP3-201ENST00000442971 IL21Q9HBE4 155 aa7.89□□□□□ -1.15
SSXP3-201ENST00000442971 PRDM8Q9NQV8 689 aa7.89□□□□□ -1.15
SSXP3-201ENST00000442971 PPM1HQ9ULR3 514 aa7.89□□□□□ -1.15
SSXP3-201ENST00000442971 STARD13Q9Y3M8 1113 aa7.89□□□□□ -1.15
SSXP3-201ENST00000442971 TTLL8A6PVC2 850 aa7.88□□□□□ -1.15
SSXP3-201ENST00000442971 DHX15O43143 795 aaKnown RBP7.88□□□□□ -1.15
SSXP3-201ENST00000442971 TRAK2O60296 914 aa7.88□□□□□ -1.15
SSXP3-201ENST00000442971 ERLIN2O94905 339 aa7.88□□□□□ -1.15
SSXP3-201ENST00000442971 VNN2O95498 520 aa7.88□□□□□ -1.15
SSXP3-201ENST00000442971 WNT1P04628 370 aa7.88□□□□□ -1.15
SSXP3-201ENST00000442971 ITGA2BP08514 1039 aa7.88□□□□□ -1.15
SSXP3-201ENST00000442971 NTSR1P30989 418 aa7.88□□□□□ -1.15
SSXP3-201ENST00000442971 CSTF2P33240 577 aaKnown RBP eCLIP7.88□□□□□ -1.15
SSXP3-201ENST00000442971 GRIA2P42262 883 aa7.88□□□□□ -1.15
SSXP3-201ENST00000442971 DUSP4Q13115 394 aa7.88□□□□□ -1.15
SSXP3-201ENST00000442971 MRPL49Q13405 166 aaKnown RBP7.88□□□□□ -1.15
SSXP3-201ENST00000442971 METTL3Q86U44 580 aaKnown RBP7.88□□□□□ -1.15
SSXP3-201ENST00000442971 ITIH5Q86UX2 942 aa7.88□□□□□ -1.15
SSXP3-201ENST00000442971 ARL14EPQ8N8R7 260 aaPredicted RBP7.88□□□□□ -1.15
SSXP3-201ENST00000442971 BEST2Q8NFU1 509 aa7.88□□□□□ -1.15
SSXP3-201ENST00000442971 GRAMD1AQ96CP6 724 aa7.88□□□□□ -1.15
SSXP3-201ENST00000442971 ABHD17AQ96GS6 310 aa7.88□□□□□ -1.15
SSXP3-201ENST00000442971 ANO2Q9NQ90 1003 aa7.88□□□□□ -1.15
SSXP3-201ENST00000442971 ITM2CQ9NQX7 267 aa7.88□□□□□ -1.15
SSXP3-201ENST00000442971 ARHGEF4Q9NR80 690 aa7.88□□□□□ -1.15
SSXP3-201ENST00000442971 PLA2G2EQ9NZK7 142 aa7.88□□□□□ -1.15
SSXP3-201ENST00000442971 SEPT10Q9P0V9 454 aa7.88□□□□□ -1.15
SSXP3-201ENST00000442971 KIAA1468Q9P260 1216 aa7.88□□□□□ -1.15
SSXP3-201ENST00000442971 USP36Q9P275 1121 aaKnown RBP7.88□□□□□ -1.15
SSXP3-201ENST00000442971 MAD2L2Q9UI95 211 aa7.88□□□□□ -1.15
SSXP3-201ENST00000442971 SLC5A6Q9Y289 635 aa7.88□□□□□ -1.15
SSXP3-201ENST00000442971 PCDHA10Q9Y5I2 948 aa7.88□□□□□ -1.15
SSXP3-201ENST00000442971 DDX11L8A8MPP1 907 aa7.87□□□□□ -1.15
SSXP3-201ENST00000442971 KCNJ18B7U540 433 aa7.87□□□□□ -1.15
SSXP3-201ENST00000442971 YKT6O15498 198 aa7.87□□□□□ -1.15
SSXP3-201ENST00000442971 LZTS3O60299 673 aaPredicted RBP7.87□□□□□ -1.15
SSXP3-201ENST00000442971 TSPAN1O60635 241 aa7.87□□□□□ -1.15
SSXP3-201ENST00000442971 SRGAP2CP0DJJ0 459 aa7.87□□□□□ -1.15
SSXP3-201ENST00000442971 LIPCP11150 499 aa7.87□□□□□ -1.15
SSXP3-201ENST00000442971 FECHP22830 423 aa7.87□□□□□ -1.15
SSXP3-201ENST00000442971 DDX6P26196 483 aaKnown RBP eCLIP7.87□□□□□ -1.15
SSXP3-201ENST00000442971 SMARCA1P28370 1054 aa7.87□□□□□ -1.15
SSXP3-201ENST00000442971 EPHA8P29322 1005 aaPredicted RBP7.87□□□□□ -1.15
SSXP3-201ENST00000442971 SLC5A2P31639 672 aa7.87□□□□□ -1.15
SSXP3-201ENST00000442971 EIF2DP41214 584 aaKnown RBP7.87□□□□□ -1.15
SSXP3-201ENST00000442971 CLCNKBP51801 687 aa7.87□□□□□ -1.15
SSXP3-201ENST00000442971 C21orf59P57076 290 aa7.87□□□□□ -1.15
SSXP3-201ENST00000442971 RPL10AP62906 217 aaKnown RBP7.87□□□□□ -1.15
SSXP3-201ENST00000442971 PRKCEQ02156 737 aa7.87□□□□□ -1.15
SSXP3-201ENST00000442971 KDSRQ06136 332 aa7.87□□□□□ -1.15
SSXP3-201ENST00000442971 ORC1Q13415 861 aa7.87□□□□□ -1.15
SSXP3-201ENST00000442971 ZNF77Q15935 545 aa7.87□□□□□ -1.15
SSXP3-201ENST00000442971 CEP55Q53EZ4 464 aa7.87□□□□□ -1.15
SSXP3-201ENST00000442971 SFMBT2Q5VUG0 894 aa7.87□□□□□ -1.15
SSXP3-201ENST00000442971 NYAP1Q6ZVC0 841 aa7.87□□□□□ -1.15
SSXP3-201ENST00000442971 CDH24Q86UP0 819 aa7.87□□□□□ -1.15
SSXP3-201ENST00000442971 XYLT1Q86Y38 959 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms