RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 FILIP1LQ4L180 1135 aa13.06□□□□□ -0.32
USP1-203ENST00000442679 DENND5BQ6ZUT9 1274 aa13.06□□□□□ -0.32
USP1-203ENST00000442679 GAREM2Q75VX8 874 aa13.06□□□□□ -0.32
USP1-203ENST00000442679 NPAS3Q8IXF0 933 aa13.06□□□□□ -0.32
USP1-203ENST00000442679 NUP93Q8N1F7 819 aa13.06□□□□□ -0.32
USP1-203ENST00000442679 TRMT2BQ96GJ1 504 aaKnown RBP13.06□□□□□ -0.32
USP1-203ENST00000442679 MYRFLQ96LU7 910 aa13.06□□□□□ -0.32
USP1-203ENST00000442679 PCMTD1Q96MG8 357 aaPredicted RBP13.06□□□□□ -0.32
USP1-203ENST00000442679 GCNAQ96QF7 691 aa13.06□□□□□ -0.32
USP1-203ENST00000442679 COL25A1Q9BXS0 654 aaPredicted RBP13.06□□□□□ -0.32
USP1-203ENST00000442679 DUSP16Q9BY84 665 aa13.06□□□□□ -0.32
USP1-203ENST00000442679 ATXN3LQ9H3M9 355 aa13.06□□□□□ -0.32
USP1-203ENST00000442679 IL21Q9HBE4 155 aa13.06□□□□□ -0.32
USP1-203ENST00000442679 CSNK1G1Q9HCP0 422 aa13.06□□□□□ -0.32
USP1-203ENST00000442679 PLCB1Q9NQ66 1216 aa13.06□□□□□ -0.32
USP1-203ENST00000442679 GDE1Q9NZC3 331 aa13.06□□□□□ -0.32
USP1-203ENST00000442679 EHD2Q9NZN4 543 aa13.06□□□□□ -0.32
USP1-203ENST00000442679 UXTQ9UBK9 157 aaPredicted RBP13.06□□□□□ -0.32
USP1-203ENST00000442679 AJAP1Q9UKB5 411 aaPredicted RBP13.06□□□□□ -0.32
USP1-203ENST00000442679 FOXN3O00409 490 aaPredicted RBP13.05□□□□□ -0.32
USP1-203ENST00000442679 SERPINC1P01008 464 aa13.05□□□□□ -0.32
USP1-203ENST00000442679 CALCAP01258 141 aa13.05□□□□□ -0.32
USP1-203ENST00000442679 F11P03951 625 aa13.05□□□□□ -0.32
USP1-203ENST00000442679 NPR3P17342 541 aa13.05□□□□□ -0.32
USP1-203ENST00000442679 KLK7P49862 253 aa13.05□□□□□ -0.32
USP1-203ENST00000442679 USP46P62068 366 aa13.05□□□□□ -0.32
USP1-203ENST00000442679 SYCP1Q15431 976 aa13.05□□□□□ -0.32
USP1-203ENST00000442679 GOLGA7BQ2TAP0 167 aa13.05□□□□□ -0.32
USP1-203ENST00000442679 ARHGAP15Q53QZ3 475 aa13.05□□□□□ -0.32
USP1-203ENST00000442679 CLEC20AQ6ZU45 233 aa13.05□□□□□ -0.32
USP1-203ENST00000442679 RNF135Q8IUD6 432 aa13.05□□□□□ -0.32
USP1-203ENST00000442679 ANKRD52Q8NB46 1076 aa13.05□□□□□ -0.32
USP1-203ENST00000442679 ZMIZ2Q8NF64 920 aa13.05□□□□□ -0.32
USP1-203ENST00000442679 TFAP2BQ92481 460 aa13.05□□□□□ -0.32
USP1-203ENST00000442679 SHC3Q92529 594 aa13.05□□□□□ -0.32
USP1-203ENST00000442679 RTN4Q9NQC3 1192 aaKnown RBP13.05□□□□□ -0.32
USP1-203ENST00000442679 FAM207AQ9NSI2 230 aaPredicted RBP13.05□□□□□ -0.32
USP1-203ENST00000442679 HESX1Q9UBX0 185 aa13.05□□□□□ -0.32
USP1-203ENST00000442679 SIK3Q9Y2K2 1263 aa13.05□□□□□ -0.32
USP1-203ENST00000442679 TCF20Q9UGU0 1960 aaKnown RBP13.05□□□□□ -0.32
USP1-203ENST00000442679 C2orf16Q68DN1 1984 aa13.04□□□□□ -0.32
USP1-203ENST00000442679 O00370 1275 aa13.04□□□□□ -0.32
USP1-203ENST00000442679 TNFRSF10BO14763 440 aa13.04□□□□□ -0.32
USP1-203ENST00000442679 TEX33O43247 280 aa13.04□□□□□ -0.32
USP1-203ENST00000442679 RTN3O95197 1032 aaPredicted RBP13.04□□□□□ -0.32
USP1-203ENST00000442679 UCHL3P15374 230 aa13.04□□□□□ -0.32
USP1-203ENST00000442679 RFX1P22670 979 aa13.04□□□□□ -0.32
USP1-203ENST00000442679 BRD2P25440 801 aaKnown RBP13.04□□□□□ -0.32
USP1-203ENST00000442679 YWHAQP27348 245 aa13.04□□□□□ -0.32
USP1-203ENST00000442679 SLC8A3P57103 927 aa13.04□□□□□ -0.32
USP1-203ENST00000442679 ZNF445P59923 1031 aa13.04□□□□□ -0.32
USP1-203ENST00000442679 CYP4F8P98187 520 aa13.04□□□□□ -0.32
USP1-203ENST00000442679 IFRD2Q12894 506 aaPredicted RBP13.04□□□□□ -0.32
USP1-203ENST00000442679 RAPGEF1Q13905 1077 aa13.04□□□□□ -0.32
USP1-203ENST00000442679 DRAP1Q14919 205 aaPredicted RBP13.04□□□□□ -0.32
USP1-203ENST00000442679 CNGA2Q16280 664 aa13.04□□□□□ -0.32
USP1-203ENST00000442679 SMYD5Q6GMV2 418 aa13.04□□□□□ -0.32
USP1-203ENST00000442679 LCLAT1Q6UWP7 414 aa13.04□□□□□ -0.32
USP1-203ENST00000442679 TMEM150AQ86TG1 271 aa13.04□□□□□ -0.32
USP1-203ENST00000442679 TTC30AQ86WT1 665 aa13.04□□□□□ -0.32
USP1-203ENST00000442679 NEK11Q8NG66 645 aa13.04□□□□□ -0.32
USP1-203ENST00000442679 SCAMP5Q8TAC9 235 aa13.04□□□□□ -0.32
USP1-203ENST00000442679 UBA3Q8TBC4 463 aa13.04□□□□□ -0.32
USP1-203ENST00000442679 ZSWIM3Q96MP5 696 aa13.04□□□□□ -0.32
USP1-203ENST00000442679 NAP1L5Q96NT1 182 aaPredicted RBP13.04□□□□□ -0.32
USP1-203ENST00000442679 ERGIC2Q96RQ1 377 aa13.04□□□□□ -0.32
USP1-203ENST00000442679 TTLL2Q9BWV7 592 aa13.04□□□□□ -0.32
USP1-203ENST00000442679 NAA15Q9BXJ9 866 aaKnown RBP13.04□□□□□ -0.32
USP1-203ENST00000442679 STK33Q9BYT3 514 aa13.04□□□□□ -0.32
USP1-203ENST00000442679 UBXN6Q9BZV1 441 aa13.04□□□□□ -0.32
USP1-203ENST00000442679 GPR88Q9GZN0 384 aa13.04□□□□□ -0.32
USP1-203ENST00000442679 GANQ9H2C0 597 aa13.04□□□□□ -0.32
USP1-203ENST00000442679 SLITRK6Q9H5Y7 841 aa13.04□□□□□ -0.32
USP1-203ENST00000442679 COMMD8Q9NX08 183 aa13.04□□□□□ -0.32
USP1-203ENST00000442679 TSPAN16Q9UKR8 245 aa13.04□□□□□ -0.32
USP1-203ENST00000442679 FHOD1Q9Y613 1164 aa13.04□□□□□ -0.32
USP1-203ENST00000442679 HHLA1C9JL84 531 aa13.03□□□□□ -0.32
USP1-203ENST00000442679 CYP26A1O43174 497 aa13.03□□□□□ -0.32
USP1-203ENST00000442679 ASGR2P07307 311 aa13.03□□□□□ -0.32
USP1-203ENST00000442679 SLC5A3P53794 718 aa13.03□□□□□ -0.32
USP1-203ENST00000442679 POLR2FP61218 127 aaKnown RBP13.03□□□□□ -0.32
USP1-203ENST00000442679 FANCCQ00597 558 aa13.03□□□□□ -0.32
USP1-203ENST00000442679 TAF10Q12962 218 aa13.03□□□□□ -0.32
USP1-203ENST00000442679 STILQ15468 1287 aa13.03□□□□□ -0.32
USP1-203ENST00000442679 FAM78AQ5JUQ0 283 aa13.03□□□□□ -0.32
USP1-203ENST00000442679 STXBP5Q5T5C0 1151 aa13.03□□□□□ -0.32
USP1-203ENST00000442679 GPR158Q5T848 1215 aa13.03□□□□□ -0.32
USP1-203ENST00000442679 PARM1Q6UWI2 310 aa13.03□□□□□ -0.32
USP1-203ENST00000442679 FAM71AQ8IYT1 594 aa13.03□□□□□ -0.32
USP1-203ENST00000442679 ST13P5Q8NFI4 369 aaPredicted RBP13.03□□□□□ -0.32
USP1-203ENST00000442679 MRPS31Q92665 395 aaKnown RBP13.03□□□□□ -0.32
USP1-203ENST00000442679 ZSWIM1Q9BR11 485 aa13.03□□□□□ -0.32
USP1-203ENST00000442679 TASP1Q9H6P5 420 aa13.03□□□□□ -0.32
USP1-203ENST00000442679 KCNK12Q9HB15 430 aa13.03□□□□□ -0.32
USP1-203ENST00000442679 PNPLA8Q9NP80 782 aa13.03□□□□□ -0.32
USP1-203ENST00000442679 IL37Q9NZH6 218 aa13.03□□□□□ -0.32
USP1-203ENST00000442679 TRPM5Q9NZQ8 1165 aa13.03□□□□□ -0.32
USP1-203ENST00000442679 A0A1B0GTH6 734 aa13.02□□□□□ -0.33
USP1-203ENST00000442679 ANHXE9PGG2 379 aa13.02□□□□□ -0.33
USP1-203ENST00000442679 TNFRSF10AO00220 468 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms