RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 SGSM1Q2NKQ1 1148 aa14.77□□□□□ -0.05
MCF2L-218ENST00000442625 CDHR3Q6ZTQ4 885 aa14.77□□□□□ -0.05
MCF2L-218ENST00000442625 KRT27Q7Z3Y8 459 aa14.77□□□□□ -0.05
MCF2L-218ENST00000442625 IQCF2Q8IXL9 164 aa14.77□□□□□ -0.05
MCF2L-218ENST00000442625 PALM2Q8IXS6 379 aa14.77□□□□□ -0.05
MCF2L-218ENST00000442625 SKA1Q96BD8 255 aa14.77□□□□□ -0.05
MCF2L-218ENST00000442625 TTC1Q99614 292 aa14.77□□□□□ -0.05
MCF2L-218ENST00000442625 PARVAQ9NVD7 372 aa14.77□□□□□ -0.05
MCF2L-218ENST00000442625 RBAKQ9NYW8 714 aaPredicted RBP14.77□□□□□ -0.05
MCF2L-218ENST00000442625 ZNF646O15015 1829 aaPredicted RBP14.77□□□□□ -0.05
MCF2L-218ENST00000442625 NAT2P11245 290 aa14.76□□□□□ -0.05
MCF2L-218ENST00000442625 SKIP12755 728 aa14.76□□□□□ -0.05
MCF2L-218ENST00000442625 OTUD4Q01804 1114 aaKnown RBP14.76□□□□□ -0.05
MCF2L-218ENST00000442625 PSMD6Q15008 389 aa14.76□□□□□ -0.05
MCF2L-218ENST00000442625 CES4AQ5XG92 561 aa14.76□□□□□ -0.05
MCF2L-218ENST00000442625 RCOR2Q8IZ40 523 aa14.76□□□□□ -0.05
MCF2L-218ENST00000442625 ACTL9Q8TC94 416 aa14.76□□□□□ -0.05
MCF2L-218ENST00000442625 AKT1S1Q96B36 256 aa14.76□□□□□ -0.05
MCF2L-218ENST00000442625 IFT43Q96FT9 208 aa14.76□□□□□ -0.05
MCF2L-218ENST00000442625 LMCD1Q9NZU5 365 aa14.76□□□□□ -0.05
MCF2L-218ENST00000442625 SENP1Q9P0U3 644 aa14.76□□□□□ -0.05
MCF2L-218ENST00000442625 SLC24A2Q9UI40 661 aa14.76□□□□□ -0.05
MCF2L-218ENST00000442625 TRPC5Q9UL62 973 aaPredicted RBP14.76□□□□□ -0.05
MCF2L-218ENST00000442625 SCINQ9Y6U3 715 aa14.76□□□□□ -0.05
MCF2L-218ENST00000442625 hCG_1818297A0A087WSY0 165 aa14.76□□□□□ -0.05
MCF2L-218ENST00000442625 PEX14O75381 377 aa14.76□□□□□ -0.05
MCF2L-218ENST00000442625 MT-ND3P03897 115 aa14.76□□□□□ -0.05
MCF2L-218ENST00000442625 GCLCP48506 637 aaPredicted RBP14.76□□□□□ -0.05
MCF2L-218ENST00000442625 BASP1P80723 227 aaKnown RBP14.76□□□□□ -0.05
MCF2L-218ENST00000442625 CDK16Q00536 496 aa14.76□□□□□ -0.05
MCF2L-218ENST00000442625 ROR2Q01974 943 aaKnown RBP14.76□□□□□ -0.05
MCF2L-218ENST00000442625 HSF5Q4G112 596 aaPredicted RBP14.76□□□□□ -0.05
MCF2L-218ENST00000442625 STYK1Q6J9G0 422 aa14.76□□□□□ -0.05
MCF2L-218ENST00000442625 DCUN1D2Q6PH85 259 aa14.76□□□□□ -0.05
MCF2L-218ENST00000442625 ISLR2Q6UXK2 745 aa14.76□□□□□ -0.05
MCF2L-218ENST00000442625 PHF13Q86YI8 300 aaPredicted RBP14.76□□□□□ -0.05
MCF2L-218ENST00000442625 UNC45BQ8IWX7 931 aa14.76□□□□□ -0.05
MCF2L-218ENST00000442625 TRIM42Q8IWZ5 723 aa14.76□□□□□ -0.05
MCF2L-218ENST00000442625 GALNT15Q8N3T1 639 aa14.76□□□□□ -0.05
MCF2L-218ENST00000442625 SH3TC2Q8TF17 1288 aa14.76□□□□□ -0.05
MCF2L-218ENST00000442625 ZNF606Q8WXB4 792 aa14.76□□□□□ -0.05
MCF2L-218ENST00000442625 FGD4Q96M96 766 aa14.76□□□□□ -0.05
MCF2L-218ENST00000442625 TARS2Q9BW92 718 aaKnown RBP14.76□□□□□ -0.05
MCF2L-218ENST00000442625 TRIM4Q9C037 500 aa14.76□□□□□ -0.05
MCF2L-218ENST00000442625 VCXQ9H320 206 aa14.76□□□□□ -0.05
MCF2L-218ENST00000442625 SYNCQ9H7C4 482 aa14.76□□□□□ -0.05
MCF2L-218ENST00000442625 CYP26B1Q9NR63 512 aa14.76□□□□□ -0.05
MCF2L-218ENST00000442625 PCMTD2Q9NV79 361 aa14.76□□□□□ -0.05
MCF2L-218ENST00000442625 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.76□□□□□ -0.05
MCF2L-218ENST00000442625 ARHGAP28Q9P2N2 729 aa14.76□□□□□ -0.05
MCF2L-218ENST00000442625 IP6K2Q9UHH9 426 aa14.76□□□□□ -0.05
MCF2L-218ENST00000442625 LRRIQ4A6NIV6 560 aa14.75□□□□□ -0.05
MCF2L-218ENST00000442625 ATP2A1O14983 1001 aa14.75□□□□□ -0.05
MCF2L-218ENST00000442625 LMNAP02545 664 aaKnown RBP14.75□□□□□ -0.05
MCF2L-218ENST00000442625 EDN1P05305 212 aa14.75□□□□□ -0.05
MCF2L-218ENST00000442625 ETS2P15036 469 aa14.75□□□□□ -0.05
MCF2L-218ENST00000442625 RPL22P35268 128 aaKnown RBP14.75□□□□□ -0.05
MCF2L-218ENST00000442625 SLC18A1P54219 525 aa14.75□□□□□ -0.05
MCF2L-218ENST00000442625 LMNB2Q03252 620 aa14.75□□□□□ -0.05
MCF2L-218ENST00000442625 RASA2Q15283 850 aa14.75□□□□□ -0.05
MCF2L-218ENST00000442625 ADGRD1Q6QNK2 874 aa14.75□□□□□ -0.05
MCF2L-218ENST00000442625 ZNF277Q9NRM2 450 aaPredicted RBP14.75□□□□□ -0.05
MCF2L-218ENST00000442625 TMEM191CA6NGB0 347 aa14.75□□□□□ -0.05
MCF2L-218ENST00000442625 MEI4A8MW99 385 aa14.75□□□□□ -0.05
MCF2L-218ENST00000442625 CYB561D2O14569 222 aa14.75□□□□□ -0.05
MCF2L-218ENST00000442625 DGAT1O75907 488 aa14.75□□□□□ -0.05
MCF2L-218ENST00000442625 RGS20O76081 388 aa14.75□□□□□ -0.05
MCF2L-218ENST00000442625 NR3C2P08235 984 aa14.75□□□□□ -0.05
MCF2L-218ENST00000442625 TMEM191BP0C7N4 346 aa14.75□□□□□ -0.05
MCF2L-218ENST00000442625 CDKN2BP42772 138 aa14.75□□□□□ -0.05
MCF2L-218ENST00000442625 TAF5Q15542 800 aa14.75□□□□□ -0.05
MCF2L-218ENST00000442625 MAMSTRQ6ZN01 415 aa14.75□□□□□ -0.05
MCF2L-218ENST00000442625 PRPF39Q86UA1 669 aaKnown RBP14.75□□□□□ -0.05
MCF2L-218ENST00000442625 FAM71DQ8N9W8 422 aa14.75□□□□□ -0.05
MCF2L-218ENST00000442625 OXNAD1Q96HP4 312 aaPredicted RBP14.75□□□□□ -0.05
MCF2L-218ENST00000442625 RBM41Q96IZ5 413 aaKnown RBP14.75□□□□□ -0.05
MCF2L-218ENST00000442625 TRIM56Q9BRZ2 755 aaKnown RBP14.75□□□□□ -0.05
MCF2L-218ENST00000442625 QTRT2Q9H974 415 aaKnown RBP14.75□□□□□ -0.05
MCF2L-218ENST00000442625 AGTPBP1Q9UPW5 1226 aa14.75□□□□□ -0.05
MCF2L-218ENST00000442625 FARP1Q9Y4F1 1045 aaPredicted RBP14.75□□□□□ -0.05
MCF2L-218ENST00000442625 WDR46O15213 610 aaKnown RBP14.74□□□□□ -0.05
MCF2L-218ENST00000442625 MAP3K7O43318 606 aa14.74□□□□□ -0.05
MCF2L-218ENST00000442625 CST8O60676 142 aa14.74□□□□□ -0.05
MCF2L-218ENST00000442625 TOP3BO95985 862 aaKnown RBP14.74□□□□□ -0.05
MCF2L-218ENST00000442625 PYGLP06737 847 aa14.74□□□□□ -0.05
MCF2L-218ENST00000442625 MMP8P22894 467 aa14.74□□□□□ -0.05
MCF2L-218ENST00000442625 OCRLQ01968 901 aa14.74□□□□□ -0.05
MCF2L-218ENST00000442625 PTK7Q13308 1070 aa14.74□□□□□ -0.05
MCF2L-218ENST00000442625 KBTBD12Q3ZCT8 623 aa14.74□□□□□ -0.05
MCF2L-218ENST00000442625 CCDC62Q6P9F0 684 aa14.74□□□□□ -0.05
MCF2L-218ENST00000442625 IZUMO2Q6UXV1 221 aa14.74□□□□□ -0.05
MCF2L-218ENST00000442625 TMEM130Q8N3G9 435 aa14.74□□□□□ -0.05
MCF2L-218ENST00000442625 RBM15BQ8NDT2 890 aaKnown RBP14.74□□□□□ -0.05
MCF2L-218ENST00000442625 ATP6V0A1Q93050 837 aa14.74□□□□□ -0.05
MCF2L-218ENST00000442625 TUBGCP5Q96RT8 1024 aa14.74□□□□□ -0.05
MCF2L-218ENST00000442625 THTPAQ9BU02 230 aa14.74□□□□□ -0.05
MCF2L-218ENST00000442625 MSTO1Q9BUK6 570 aa14.74□□□□□ -0.05
MCF2L-218ENST00000442625 PDLIM7Q9NR12 457 aa14.74□□□□□ -0.05
MCF2L-218ENST00000442625 FBXO40Q9UH90 709 aa14.74□□□□□ -0.05
MCF2L-218ENST00000442625 XPO7Q9UIA9 1087 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms