RNA–Protein interactions for RNA: ENST00000441402.5

TMEM39B-203, Transcript of transmembrane protein 39B, humanhuman

TSL 1 (best)

Gene TMEM39B, Length 1,538 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-203ENST00000441402 MTERF4Q7Z6M4 381 aaKnown RBP17.88■□□□□ 0.45
TMEM39B-203ENST00000441402 NPAS4Q8IUM7 802 aa17.88■□□□□ 0.45
TMEM39B-203ENST00000441402 SCUBE3Q8IX30 993 aa17.88■□□□□ 0.45
TMEM39B-203ENST00000441402 ABI1Q8IZP0 508 aa17.88■□□□□ 0.45
TMEM39B-203ENST00000441402 THEM5Q8N1Q8 247 aa17.88■□□□□ 0.45
TMEM39B-203ENST00000441402 ARFGAP1Q8N6T3 406 aa17.88■□□□□ 0.45
TMEM39B-203ENST00000441402 DIS3LQ8TF46 1054 aaKnown RBP17.88■□□□□ 0.45
TMEM39B-203ENST00000441402 PKMYT1Q99640 499 aa17.88■□□□□ 0.45
TMEM39B-203ENST00000441402 DMGDHQ9UI17 866 aaKnown RBP17.88■□□□□ 0.45
TMEM39B-203ENST00000441402 LRFN2Q9ULH4 789 aa17.88■□□□□ 0.45
TMEM39B-203ENST00000441402 SCN5AQ14524 2016 aa17.88■□□□□ 0.45
TMEM39B-203ENST00000441402 MYBPHLA2RUH7 354 aa17.88■□□□□ 0.45
TMEM39B-203ENST00000441402 LRCH4O75427 683 aa17.88■□□□□ 0.45
TMEM39B-203ENST00000441402 RNF8O76064 485 aa17.88■□□□□ 0.45
TMEM39B-203ENST00000441402 ITGB1P05556 798 aa17.88■□□□□ 0.45
TMEM39B-203ENST00000441402 FAM200BP0CF97 657 aa17.88■□□□□ 0.45
TMEM39B-203ENST00000441402 CYP2C18P33260 490 aa17.88■□□□□ 0.45
TMEM39B-203ENST00000441402 VSNL1P62760 191 aa17.88■□□□□ 0.45
TMEM39B-203ENST00000441402 MAPRE1Q15691 268 aaKnown RBP17.88■□□□□ 0.45
TMEM39B-203ENST00000441402 HADHQ16836 314 aaKnown RBP17.88■□□□□ 0.45
TMEM39B-203ENST00000441402 INTS6LQ5JSJ4 861 aaKnown RBP17.88■□□□□ 0.45
TMEM39B-203ENST00000441402 OVOS1Q6IE37 1185 aa17.88■□□□□ 0.45
TMEM39B-203ENST00000441402 CLEC20AQ6ZU45 233 aa17.88■□□□□ 0.45
TMEM39B-203ENST00000441402 MAATS1Q7Z4T9 603 aa17.88■□□□□ 0.45
TMEM39B-203ENST00000441402 PIGZQ86VD9 579 aa17.88■□□□□ 0.45
TMEM39B-203ENST00000441402 EMC1Q8N766 993 aa17.88■□□□□ 0.45
TMEM39B-203ENST00000441402 CCDC26Q8TAB7 109 aa17.88■□□□□ 0.45
TMEM39B-203ENST00000441402 PCED1BQ96HM7 432 aa17.88■□□□□ 0.45
TMEM39B-203ENST00000441402 MRPL9Q9BYD2 267 aaKnown RBP17.88■□□□□ 0.45
TMEM39B-203ENST00000441402 PPP1R12CQ9BZL4 782 aa17.88■□□□□ 0.45
TMEM39B-203ENST00000441402 C11orf49Q9H6J7 331 aa17.88■□□□□ 0.45
TMEM39B-203ENST00000441402 NRDE2Q9H7Z3 1164 aa17.88■□□□□ 0.45
TMEM39B-203ENST00000441402 CSNK1G1Q9HCP0 422 aa17.88■□□□□ 0.45
TMEM39B-203ENST00000441402 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.88■□□□□ 0.45
TMEM39B-203ENST00000441402 STIM2Q9P246 746 aa17.88■□□□□ 0.45
TMEM39B-203ENST00000441402 MTUS1Q9ULD2 1270 aa17.88■□□□□ 0.45
TMEM39B-203ENST00000441402 NR2E1Q9Y466 385 aa17.88■□□□□ 0.45
TMEM39B-203ENST00000441402 BHMG1C9JSJ3 638 aaPredicted RBP17.87■□□□□ 0.45
TMEM39B-203ENST00000441402 I3L4J1 428 aa17.87■□□□□ 0.45
TMEM39B-203ENST00000441402 CLDN5O00501 218 aa17.87■□□□□ 0.45
TMEM39B-203ENST00000441402 ERLIN1O75477 346 aa17.87■□□□□ 0.45
TMEM39B-203ENST00000441402 OAZ2O95190 189 aa17.87■□□□□ 0.45
TMEM39B-203ENST00000441402 KRT7P08729 469 aa17.87■□□□□ 0.45
TMEM39B-203ENST00000441402 PDGFRAP16234 1089 aa17.87■□□□□ 0.45
TMEM39B-203ENST00000441402 TNFRSF8P28908 595 aa17.87■□□□□ 0.45
TMEM39B-203ENST00000441402 PTPN7P35236 360 aa17.87■□□□□ 0.45
TMEM39B-203ENST00000441402 CETN2P41208 172 aa17.87■□□□□ 0.45
TMEM39B-203ENST00000441402 SLC25A11Q02978 314 aaKnown RBP17.87■□□□□ 0.45
TMEM39B-203ENST00000441402 SIX1Q15475 284 aaPredicted RBP17.87■□□□□ 0.45
TMEM39B-203ENST00000441402 PAN2Q504Q3 1202 aaKnown RBP17.87■□□□□ 0.45
TMEM39B-203ENST00000441402 EFHC1Q5JVL4 640 aa17.87■□□□□ 0.45
TMEM39B-203ENST00000441402 DAB2IPQ5VWQ8 1189 aa17.87■□□□□ 0.45
TMEM39B-203ENST00000441402 CNKSR3Q6P9H4 555 aa17.87■□□□□ 0.45
TMEM39B-203ENST00000441402 ZDHHC14Q8IZN3 488 aa17.87■□□□□ 0.45
TMEM39B-203ENST00000441402 HDAC7Q8WUI4 952 aa17.87■□□□□ 0.45
TMEM39B-203ENST00000441402 RXFP2Q8WXD0 754 aa17.87■□□□□ 0.45
TMEM39B-203ENST00000441402 RBM41Q96IZ5 413 aaKnown RBP17.87■□□□□ 0.45
TMEM39B-203ENST00000441402 TMEM175Q9BSA9 504 aa17.87■□□□□ 0.45
TMEM39B-203ENST00000441402 MED10Q9BTT4 135 aa17.87■□□□□ 0.45
TMEM39B-203ENST00000441402 TMEM39AQ9NV64 488 aa17.87■□□□□ 0.45
TMEM39B-203ENST00000441402 SYN3O14994 580 aa17.86■□□□□ 0.45
TMEM39B-203ENST00000441402 ALDH2P05091 517 aa17.86■□□□□ 0.45
TMEM39B-203ENST00000441402 CLTBP09497 229 aa17.86■□□□□ 0.45
TMEM39B-203ENST00000441402 CHRNA3P32297 505 aa17.86■□□□□ 0.45
TMEM39B-203ENST00000441402 FLT3P36888 993 aa17.86■□□□□ 0.45
TMEM39B-203ENST00000441402 OR1G1P47890 313 aa17.86■□□□□ 0.45
TMEM39B-203ENST00000441402 LBX1P52954 281 aa17.86■□□□□ 0.45
TMEM39B-203ENST00000441402 TRNP1Q6NT89 227 aa17.86■□□□□ 0.45
TMEM39B-203ENST00000441402 TMCO3Q6UWJ1 677 aa17.86■□□□□ 0.45
TMEM39B-203ENST00000441402 CCNI2Q6ZMN8 369 aaPredicted RBP17.86■□□□□ 0.45
TMEM39B-203ENST00000441402 FAM35AQ86V20 835 aa17.86■□□□□ 0.45
TMEM39B-203ENST00000441402 KLHL7Q8IXQ5 586 aa17.86■□□□□ 0.45
TMEM39B-203ENST00000441402 PRELID2Q8N945 189 aa17.86■□□□□ 0.45
TMEM39B-203ENST00000441402 C12orf50Q8NA57 414 aaPredicted RBP17.86■□□□□ 0.45
TMEM39B-203ENST00000441402 PIWIL1Q96J94 861 aaKnown RBP17.86■□□□□ 0.45
TMEM39B-203ENST00000441402 RUNDC3BQ96NL0 473 aa17.86■□□□□ 0.45
TMEM39B-203ENST00000441402 COLEC11Q9BWP8 271 aa17.86■□□□□ 0.45
TMEM39B-203ENST00000441402 DDX47Q9H0S4 455 aaKnown RBP17.86■□□□□ 0.45
TMEM39B-203ENST00000441402 ARFGAP3Q9NP61 516 aa17.86■□□□□ 0.45
TMEM39B-203ENST00000441402 GDF3Q9NR23 364 aa17.86■□□□□ 0.45
TMEM39B-203ENST00000441402 DNAJB4Q9UDY4 337 aa17.86■□□□□ 0.45
TMEM39B-203ENST00000441402 EFR3BQ9Y2G0 817 aa17.86■□□□□ 0.45
TMEM39B-203ENST00000441402 ATP11BQ9Y2G3 1177 aa17.86■□□□□ 0.45
TMEM39B-203ENST00000441402 PIK3R2O00459 728 aa17.85■□□□□ 0.45
TMEM39B-203ENST00000441402 NRP1O14786 923 aa17.85■□□□□ 0.45
TMEM39B-203ENST00000441402 RAD51CO43502 376 aa17.85■□□□□ 0.45
TMEM39B-203ENST00000441402 ATP8B1O43520 1251 aa17.85■□□□□ 0.45
TMEM39B-203ENST00000441402 PHF2O75151 1096 aa17.85■□□□□ 0.45
TMEM39B-203ENST00000441402 BEST1O76090 585 aa17.85■□□□□ 0.45
TMEM39B-203ENST00000441402 GLI1P08151 1106 aa17.85■□□□□ 0.45
TMEM39B-203ENST00000441402 RARAP10276 462 aa17.85■□□□□ 0.45
TMEM39B-203ENST00000441402 TCF4P15884 667 aa17.85■□□□□ 0.45
TMEM39B-203ENST00000441402 SSR1P43307 286 aaKnown RBP17.85■□□□□ 0.45
TMEM39B-203ENST00000441402 PTPN9P43378 593 aa17.85■□□□□ 0.45
TMEM39B-203ENST00000441402 CTCFP49711 727 aaPredicted RBP17.85■□□□□ 0.45
TMEM39B-203ENST00000441402 RBM10P98175 930 aaKnown RBP17.85■□□□□ 0.45
TMEM39B-203ENST00000441402 YWHAHQ04917 246 aaPredicted RBP17.85■□□□□ 0.45
TMEM39B-203ENST00000441402 KLF1Q13351 362 aaPredicted RBP17.85■□□□□ 0.45
TMEM39B-203ENST00000441402 IKBKEQ14164 716 aa17.85■□□□□ 0.45
TMEM39B-203ENST00000441402 CCDC142Q17RM4 750 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms