RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 GSTM1P09488 218 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 CACNB2Q08289 660 aaPredicted RBP6.91□□□□□ -1.3
USP46-201ENST00000441222 GNA13Q14344 377 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 PDK2Q15119 407 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 SGO1Q5FBB7 561 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 PEG10Q86TG7 708 aaKnown RBP6.91□□□□□ -1.3
USP46-201ENST00000441222 LDHDQ86WU2 507 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 LRRC49Q8IUZ0 686 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 BDH2Q9BUT1 245 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 COLEC11Q9BWP8 271 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 APOL5Q9BWW9 433 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 PACSIN1Q9BY11 444 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 CAAP1Q9H8G2 361 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 ZFYVE1Q9HBF4 777 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 ITGB1BP2Q9UKP3 347 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 PNPLA7Q6ZV29 1317 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 POLR1AO95602 1720 aaPredicted RBP6.91□□□□□ -1.3
USP46-201ENST00000441222 FKBP6O75344 327 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 ATP5BP06576 529 aaKnown RBP6.91□□□□□ -1.3
USP46-201ENST00000441222 RBP1P09455 135 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 RBP3P10745 1247 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 NUDT2P50583 147 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 YWHAZP63104 245 aaKnown RBP6.91□□□□□ -1.3
USP46-201ENST00000441222 SNAPC2Q13487 334 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 TOB2Q14106 344 aaPredicted RBP6.91□□□□□ -1.3
USP46-201ENST00000441222 TSNQ15631 228 aaKnown RBP6.91□□□□□ -1.3
USP46-201ENST00000441222 CHI3L2Q15782 390 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 MGAT5BQ3V5L5 792 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 TFDP3Q5H9I0 405 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 TRIQKQ629K1 86 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 SEL1L3Q68CR1 1132 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 KRT73Q86Y46 540 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 GSPT2Q8IYD1 628 aaKnown RBP6.91□□□□□ -1.3
USP46-201ENST00000441222 PARK7Q99497 189 aaKnown RBP6.91□□□□□ -1.3
USP46-201ENST00000441222 LRRC1Q9BTT6 524 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 CLPBQ9H078 707 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 ISCUQ9H1K1 167 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 OVOS2A0A0G2JMS6 1433 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 OVOS2A0A0J9YW53 1432 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 OVOS2Q6IE36 1432 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 ZMYM2Q9UBW7 1377 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 A0A087WWV3 80 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 HOXA2O43364 376 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 NCAM1P13591 858 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 OXCT1P55809 520 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 COX10Q12887 443 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 INAQ16352 499 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 ZNF284Q2VY69 593 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 NDUFAF6Q330K2 333 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 KLHL12Q53G59 568 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 ATAD3BQ5T9A4 648 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 MFSD4BQ5TF39 518 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 CDC73Q6P1J9 531 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 KDELC2Q7Z4H8 507 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 CHSY1Q86X52 802 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 HPDLQ96IR7 371 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 MAP3K14Q99558 947 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 RAD18Q9NS91 495 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 WHRNQ9P202 907 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 POLG2Q9UHN1 485 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 MAPRE3Q9UPY8 281 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 MYH7P12883 1935 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 A0A1B0GTH6 734 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 PSMD12O00232 456 aaPredicted RBP6.91□□□□□ -1.3
USP46-201ENST00000441222 WWP2O00308 870 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 NCK2O43639 380 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 KRT34O76011 436 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 MED26O95402 600 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 IL6P05231 212 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 GYS2P54840 703 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 ATF7IP2Q5U623 682 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 OTOAQ7RTW8 1153 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 SYNE4Q8N205 404 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 ZNF786Q8N393 782 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 RAD21L1Q9H4I0 556 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 ALG13Q9NP73 1137 aaKnown RBP6.91□□□□□ -1.3
USP46-201ENST00000441222 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.91□□□□□ -1.3
USP46-201ENST00000441222 ITSN1Q15811 1721 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 A2ML1A8K2U0 1454 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 ERN1O75460 977 aaKnown RBP6.91□□□□□ -1.3
USP46-201ENST00000441222 ASS1P00966 412 aaKnown RBP6.91□□□□□ -1.3
USP46-201ENST00000441222 KRT6BP04259 564 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 KRT6CP48668 564 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 ALDH7A1P49419 539 aaKnown RBP6.91□□□□□ -1.3
USP46-201ENST00000441222 LONRF1Q17RB8 773 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 C12orf60Q5U649 245 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 SUSD4Q5VX71 490 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 PMF1Q6P1K2 205 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 CPA5Q8WXQ8 436 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 ZNF669Q96BR6 464 aaPredicted RBP6.91□□□□□ -1.3
USP46-201ENST00000441222 NLNQ9BYT8 704 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 TMEM117Q9H0C3 514 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 MARCOQ9UEW3 520 aaPredicted RBP6.91□□□□□ -1.3
USP46-201ENST00000441222 VPS51Q9UID3 782 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 ADCY10Q96PN6 1610 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 METP08581 1390 aa6.91□□□□□ -1.3
USP46-201ENST00000441222 MAGEB16A2A368 324 aa6.9□□□□□ -1.3
USP46-201ENST00000441222 CARNS1A5YM72 827 aa6.9□□□□□ -1.3
USP46-201ENST00000441222 GRK2P25098 689 aa6.9□□□□□ -1.3
USP46-201ENST00000441222 TGFBR2P37173 567 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms