RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 PPP2R3CQ969Q6 453 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 ASB2Q96Q27 587 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 CAPS2Q9BXY5 557 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 MTMR12Q9C0I1 747 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 CNOT10Q9H9A5 744 aaKnown RBP5.03□□□□□ -1.6
EDEM3-203ENST00000439962 MARCH5Q9NX47 278 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 DNAJC12Q9UKB3 198 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 C2orf71A6NGG8 1288 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 MEFVO15553 781 aaPredicted RBP5.03□□□□□ -1.6
EDEM3-203ENST00000439962 EXOC3O60645 756 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 PDGFRBP09619 1106 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 TNFAIP3P21580 790 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 VAMP7P51809 220 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 GALCP54803 685 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 MFAP3P55082 362 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 BPIFB4P59827 614 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 CLDN10P78369 228 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 TUSC3Q13454 348 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 DRAP1Q14919 205 aaPredicted RBP5.03□□□□□ -1.6
EDEM3-203ENST00000439962 DCAF17Q5H9S7 520 aaPredicted RBP5.03□□□□□ -1.6
EDEM3-203ENST00000439962 TCERG1LQ5VWI1 586 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 GPR153Q6NV75 609 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 RSPO2Q6UXX9 243 aaPredicted RBP5.03□□□□□ -1.6
EDEM3-203ENST00000439962 LRRC31Q6UY01 552 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 MAP4K3Q8IVH8 894 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 MRPL43Q8N983 215 aaKnown RBP5.03□□□□□ -1.6
EDEM3-203ENST00000439962 CENPTQ96BT3 561 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 FAXDC2Q96IV6 333 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 ATP6V1G3Q96LB4 118 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 TMEM209Q96SK2 561 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 AGPAT1Q99943 283 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 LPIN3Q9BQK8 851 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 GPR88Q9GZN0 384 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 STMN4Q9H169 189 aaPredicted RBP5.03□□□□□ -1.6
EDEM3-203ENST00000439962 AVENQ9NQS1 362 aaPredicted RBP5.03□□□□□ -1.6
EDEM3-203ENST00000439962 MAN1C1Q9NR34 630 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 HOMER3Q9NSC5 361 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 HCFC1R1Q9NWW0 138 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 RBAKQ9NYW8 714 aaPredicted RBP5.03□□□□□ -1.6
EDEM3-203ENST00000439962 NXF1Q9UBU9 619 aaKnown RBP5.03□□□□□ -1.6
EDEM3-203ENST00000439962 PCYOX1Q9UHG3 505 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 TNFSF13BQ9Y275 285 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 UTP11Q9Y3A2 253 aaKnown RBP5.03□□□□□ -1.6
EDEM3-203ENST00000439962 SPTBN4Q9H254 2564 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 FNDC1Q4ZHG4 1894 aaPredicted RBP5.03□□□□□ -1.6
EDEM3-203ENST00000439962 CCDC195A0A1B0GUA6 201 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 KCNK3O14649 394 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 PRRG1O14668 218 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 DDX3YO15523 660 aaKnown RBP5.02□□□□□ -1.61
EDEM3-203ENST00000439962 BUB1O43683 1085 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 ZNF623O75123 536 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 LRRN2O75325 713 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 PPFIA2O75334 1257 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 PIGRP01833 764 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 ITGB3P05106 788 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 NUDT17P0C025 328 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 MYBL2P10244 700 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 SKIP12755 728 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 GBP2P32456 591 aaPredicted RBP5.02□□□□□ -1.61
EDEM3-203ENST00000439962 PPM1AP35813 382 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 FNTAP49354 379 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 AP3M2P53677 418 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 GPC5P78333 572 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 POU5F1Q01860 360 aaKnown RBP5.02□□□□□ -1.61
EDEM3-203ENST00000439962 GCNT1Q02742 428 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 TIGD5Q53EQ6 642 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 TJAP1Q5JTD0 557 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 TRIM72Q6ZMU5 477 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 GET4Q7L5D6 327 aaPredicted RBP5.02□□□□□ -1.61
EDEM3-203ENST00000439962 FAM71AQ8IYT1 594 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 LNX1Q8TBB1 728 aaPredicted RBP5.02□□□□□ -1.61
EDEM3-203ENST00000439962 SLC7A14Q8TBB6 771 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 RSAD2Q8WXG1 361 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 MFSD14AQ96MC6 490 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 FOXP3Q9BZS1 431 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 ADAM7Q9H2U9 754 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 TMBIM4Q9HC24 238 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 EPB41L5Q9HCM4 733 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 TMEM8AQ9HCN3 771 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 KANSL3Q9P2N6 904 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 LIMD1Q9UGP4 676 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 MUTYHQ9UIF7 546 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 MAGED2Q9UNF1 606 aaPredicted RBP5.02□□□□□ -1.61
EDEM3-203ENST00000439962 GIT1Q9Y2X7 761 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 RAD51CO43502 376 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 PHACTR2O75167 634 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 CYP1A2P05177 515 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 GLI1P08151 1106 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 TMEM191BP0C7N4 346 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 AXLP30530 894 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 POLR2BP30876 1174 aaKnown RBP5.02□□□□□ -1.61
EDEM3-203ENST00000439962 SLC1A1P43005 524 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 MAGEA9P43362 315 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 NOP2P46087 812 aaKnown RBP5.02□□□□□ -1.61
EDEM3-203ENST00000439962 GLUD2P49448 558 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 IRAK1P51617 712 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 CORO7P57737 925 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 GUCY2DQ02846 1103 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 CAV1Q03135 178 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 GRIK3Q13003 919 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms