RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 CATSPERBQ9H7T0 1116 aa12.81□□□□□ -0.36
TCOF1-205ENST00000439160 PCDHGC5Q9Y5F6 944 aa12.81□□□□□ -0.36
TCOF1-205ENST00000439160 SPDYE5A6NIY4 337 aa12.8□□□□□ -0.36
TCOF1-205ENST00000439160 H3BQF6 201 aa12.8□□□□□ -0.36
TCOF1-205ENST00000439160 SNX2O60749 519 aa12.8□□□□□ -0.36
TCOF1-205ENST00000439160 RARAP10276 462 aa12.8□□□□□ -0.36
TCOF1-205ENST00000439160 PBX1P40424 430 aa12.8□□□□□ -0.36
TCOF1-205ENST00000439160 MROH9Q5TGP6 573 aa12.8□□□□□ -0.36
TCOF1-205ENST00000439160 AADACL2Q6P093 401 aa12.8□□□□□ -0.36
TCOF1-205ENST00000439160 MFSD7Q6UXD7 560 aa12.8□□□□□ -0.36
TCOF1-205ENST00000439160 EFHBQ8N7U6 833 aa12.8□□□□□ -0.36
TCOF1-205ENST00000439160 MTMR14Q8NCE2 650 aa12.8□□□□□ -0.36
TCOF1-205ENST00000439160 ARRDC4Q8NCT1 418 aa12.8□□□□□ -0.36
TCOF1-205ENST00000439160 SOCS4Q8WXH5 440 aa12.8□□□□□ -0.36
TCOF1-205ENST00000439160 EDEM1Q92611 657 aa12.8□□□□□ -0.36
TCOF1-205ENST00000439160 SYT15Q9BQS2 421 aa12.8□□□□□ -0.36
TCOF1-205ENST00000439160 ROPN1BQ9BZX4 212 aaPredicted RBP12.8□□□□□ -0.36
TCOF1-205ENST00000439160 SMYD3Q9H7B4 428 aa12.8□□□□□ -0.36
TCOF1-205ENST00000439160 ROPN1Q9HAT0 212 aaPredicted RBP12.8□□□□□ -0.36
TCOF1-205ENST00000439160 F8VP50 259 aa12.8□□□□□ -0.36
TCOF1-205ENST00000439160 RRP1BQ14684 758 aaKnown RBP12.8□□□□□ -0.36
TCOF1-205ENST00000439160 CCNG2Q16589 344 aa12.8□□□□□ -0.36
TCOF1-205ENST00000439160 KIF19Q2TAC6 998 aa12.8□□□□□ -0.36
TCOF1-205ENST00000439160 ANO4Q32M45 955 aa12.8□□□□□ -0.36
TCOF1-205ENST00000439160 ABHD15Q6UXT9 468 aa12.8□□□□□ -0.36
TCOF1-205ENST00000439160 SPATA21Q7Z572 469 aa12.8□□□□□ -0.36
TCOF1-205ENST00000439160 PPHLN1Q8NEY8 458 aaKnown RBP12.8□□□□□ -0.36
TCOF1-205ENST00000439160 SLC2A14Q8TDB8 520 aa12.8□□□□□ -0.36
TCOF1-205ENST00000439160 PTPRN2Q92932 1015 aa12.8□□□□□ -0.36
TCOF1-205ENST00000439160 KLRG2A4D1S0 409 aaPredicted RBP12.8□□□□□ -0.36
TCOF1-205ENST00000439160 MICAL2O94851 1124 aa12.8□□□□□ -0.36
TCOF1-205ENST00000439160 LYPLA2O95372 231 aa12.8□□□□□ -0.36
TCOF1-205ENST00000439160 GCKP35557 465 aa12.8□□□□□ -0.36
TCOF1-205ENST00000439160 COBLL1Q53SF7 1204 aa12.8□□□□□ -0.36
TCOF1-205ENST00000439160 DENND5BQ6ZUT9 1274 aa12.8□□□□□ -0.36
TCOF1-205ENST00000439160 ZNF473Q8WTR7 871 aaKnown RBP12.8□□□□□ -0.36
TCOF1-205ENST00000439160 CLEC4DQ8WXI8 215 aa12.8□□□□□ -0.36
TCOF1-205ENST00000439160 RPRD1AQ96P16 312 aaPredicted RBP12.8□□□□□ -0.36
TCOF1-205ENST00000439160 CDC42EP4Q9H3Q1 356 aaKnown RBP12.8□□□□□ -0.36
TCOF1-205ENST00000439160 SEMA4AQ9H3S1 761 aa12.8□□□□□ -0.36
TCOF1-205ENST00000439160 C20orf96Q9NUD7 363 aaPredicted RBP12.8□□□□□ -0.36
TCOF1-205ENST00000439160 KPNA6O60684 536 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 RARGP13631 454 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 NFKBIAP25963 317 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 ZACNQ401N2 412 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 CTXN3Q4LDR2 81 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 TMTC4Q5T4D3 741 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 FBXW10Q5XX13 1052 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 MROH7Q68CQ1 1323 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 SHC3Q92529 594 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 COLEC11Q9BWP8 271 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 SPECC1L-ADORA2AF8WAN1 911 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 ALDH1A1P00352 501 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 POLBP06746 335 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 LHX1P48742 406 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 NCKAP1LP55160 1127 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 RAD51Q06609 339 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 ADIGQ0VDE8 80 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 USP10Q14694 798 aaKnown RBP12.79□□□□□ -0.36
TCOF1-205ENST00000439160 PDK2Q15119 407 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 IRF2BP2Q7Z5L9 587 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 FAM71AQ8IYT1 594 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 VCPIP1Q96JH7 1222 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 MUC3BQ9H195 1237 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 FGFR1OP2Q9NVK5 253 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 BTBD7Q9P203 1132 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 BAG5Q9UL15 447 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 PLPPR4Q7Z2D5 763 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 DEFB128Q7Z7B8 93 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 SGSM3Q96HU1 749 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 ACO2Q99798 780 aaKnown RBP12.79□□□□□ -0.36
TCOF1-205ENST00000439160 APOL2Q9BQE5 337 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 ZNF446Q9NWS9 450 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 EPS15L1Q9UBC2 864 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 TNFSF13BQ9Y275 285 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 PCDHA3Q9Y5H8 950 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 E5RJQ4 531 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 SNRPAP09012 282 aaKnown RBP12.79□□□□□ -0.36
TCOF1-205ENST00000439160 ALDH1A3P47895 512 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 JAG1P78504 1218 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 OVOS1Q6IE37 1185 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 MTHFD1LQ6UB35 978 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 ACAD11Q709F0 780 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 ADAM32Q8TC27 787 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 STAMBPL1Q96FJ0 436 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 PPP1R36Q96LQ0 422 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 NDFIP2Q9NV92 336 aa12.79□□□□□ -0.36
TCOF1-205ENST00000439160 REXO2Q9Y3B8 237 aaKnown RBP12.79□□□□□ -0.36
TCOF1-205ENST00000439160 NRCAMQ92823 1304 aa12.78□□□□□ -0.36
TCOF1-205ENST00000439160 FAM153BP0C7A2 387 aa12.78□□□□□ -0.36
TCOF1-205ENST00000439160 FAM153CQ494X1 144 aa12.78□□□□□ -0.36
TCOF1-205ENST00000439160 FBXO36Q8NEA4 188 aa12.78□□□□□ -0.36
TCOF1-205ENST00000439160 BSNDQ8WZ55 320 aa12.78□□□□□ -0.36
TCOF1-205ENST00000439160 FBXO32Q969P5 355 aa12.78□□□□□ -0.36
TCOF1-205ENST00000439160 NPHS2Q9NP85 383 aa12.78□□□□□ -0.36
TCOF1-205ENST00000439160 HACD3Q9P035 362 aa12.78□□□□□ -0.36
TCOF1-205ENST00000439160 FAM153AQ9UHL3 310 aa12.78□□□□□ -0.36
TCOF1-205ENST00000439160 MOSPD1Q9UJG1 213 aa12.78□□□□□ -0.36
TCOF1-205ENST00000439160 LSM7Q9UK45 103 aaKnown RBP12.78□□□□□ -0.36
TCOF1-205ENST00000439160 DCDC2CA8MYV0 355 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms