RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 GPIHBP1Q8IV16 184 aa26.26■■□□□ 1.79
RAPGEF1-206ENST00000438647 FUKQ8N0W3 1084 aa26.26■■□□□ 1.79
RAPGEF1-206ENST00000438647 FAM122AQ96E09 287 aa26.26■■□□□ 1.79
RAPGEF1-206ENST00000438647 IRF2BPLQ9H1B7 796 aa26.26■■□□□ 1.79
RAPGEF1-206ENST00000438647 TRPC7Q9HCX4 862 aa26.26■■□□□ 1.79
RAPGEF1-206ENST00000438647 HEBP1Q9NRV9 189 aa26.26■■□□□ 1.79
RAPGEF1-206ENST00000438647 TDP1Q9NUW8 608 aa26.26■■□□□ 1.79
RAPGEF1-206ENST00000438647 THG1LQ9NWX6 298 aaKnown RBP26.26■■□□□ 1.79
RAPGEF1-206ENST00000438647 TRPM5Q9NZQ8 1165 aa26.26■■□□□ 1.79
RAPGEF1-206ENST00000438647 TRAV19A0A0A6YYK7 116 aa26.25■■□□□ 1.79
RAPGEF1-206ENST00000438647 GALR2O43603 387 aaPredicted RBP26.25■■□□□ 1.79
RAPGEF1-206ENST00000438647 PI15O43692 258 aa26.25■■□□□ 1.79
RAPGEF1-206ENST00000438647 CILPO75339 1184 aa26.25■■□□□ 1.79
RAPGEF1-206ENST00000438647 AP1G2O75843 785 aa26.25■■□□□ 1.79
RAPGEF1-206ENST00000438647 RTN3O95197 1032 aaPredicted RBP26.25■■□□□ 1.79
RAPGEF1-206ENST00000438647 PFKLP17858 780 aa26.25■■□□□ 1.79
RAPGEF1-206ENST00000438647 CACNA2D1P54289 1103 aa26.25■■□□□ 1.79
RAPGEF1-206ENST00000438647 STX17P56962 302 aa26.25■■□□□ 1.79
RAPGEF1-206ENST00000438647 ORC1Q13415 861 aa26.25■■□□□ 1.79
RAPGEF1-206ENST00000438647 ZNF852Q6ZMS4 543 aa26.25■■□□□ 1.79
RAPGEF1-206ENST00000438647 NUP93Q8N1F7 819 aa26.25■■□□□ 1.79
RAPGEF1-206ENST00000438647 PRSS33Q8NF86 280 aa26.25■■□□□ 1.79
RAPGEF1-206ENST00000438647 PJA1Q8NG27 643 aa26.25■■□□□ 1.79
RAPGEF1-206ENST00000438647 SLC2A14Q8TDB8 520 aa26.25■■□□□ 1.79
RAPGEF1-206ENST00000438647 CSGALNACT1Q8TDX6 532 aa26.25■■□□□ 1.79
RAPGEF1-206ENST00000438647 SLITRK1Q96PX8 696 aa26.25■■□□□ 1.79
RAPGEF1-206ENST00000438647 KRT82Q9NSB4 513 aa26.25■■□□□ 1.79
RAPGEF1-206ENST00000438647 TMEM30AQ9NV96 361 aa26.25■■□□□ 1.79
RAPGEF1-206ENST00000438647 MRPS17Q9Y2R5 130 aaKnown RBP26.25■■□□□ 1.79
RAPGEF1-206ENST00000438647 DENND4CQ5VZ89 1909 aa26.25■■□□□ 1.79
RAPGEF1-206ENST00000438647 MAN2B1O00754 1011 aa26.24■■□□□ 1.79
RAPGEF1-206ENST00000438647 PMM2O15305 246 aa26.24■■□□□ 1.79
RAPGEF1-206ENST00000438647 LRRN2O75325 713 aa26.24■■□□□ 1.79
RAPGEF1-206ENST00000438647 USP17L7P0C7H9 530 aa26.24■■□□□ 1.79
RAPGEF1-206ENST00000438647 CCDC130P13994 396 aa26.24■■□□□ 1.79
RAPGEF1-206ENST00000438647 GLULP15104 373 aa26.24■■□□□ 1.79
RAPGEF1-206ENST00000438647 PLA2G5P39877 138 aa26.24■■□□□ 1.79
RAPGEF1-206ENST00000438647 FMO5P49326 533 aa26.24■■□□□ 1.79
RAPGEF1-206ENST00000438647 USP46P62068 366 aa26.24■■□□□ 1.79
RAPGEF1-206ENST00000438647 CETN1Q12798 172 aa26.24■■□□□ 1.79
RAPGEF1-206ENST00000438647 ZNF268Q14587 947 aaPredicted RBP26.24■■□□□ 1.79
RAPGEF1-206ENST00000438647 PAQR9Q6ZVX9 377 aa26.24■■□□□ 1.79
RAPGEF1-206ENST00000438647 IPO9Q96P70 1041 aaKnown RBP26.24■■□□□ 1.79
RAPGEF1-206ENST00000438647 NELL2Q99435 816 aa26.24■■□□□ 1.79
RAPGEF1-206ENST00000438647 OSBPL6Q9BZF3 934 aa26.24■■□□□ 1.79
RAPGEF1-206ENST00000438647 FAM49BQ9NUQ9 324 aa26.24■■□□□ 1.79
RAPGEF1-206ENST00000438647 RWDD2AQ9UIY3 292 aa26.24■■□□□ 1.79
RAPGEF1-206ENST00000438647 ARNTLO00327 626 aa26.23■■□□□ 1.79
RAPGEF1-206ENST00000438647 CKMP06732 381 aa26.23■■□□□ 1.79
RAPGEF1-206ENST00000438647 MLLT6P55198 1093 aaPredicted RBP26.23■■□□□ 1.79
RAPGEF1-206ENST00000438647 CCDC105Q8IYK2 499 aa26.23■■□□□ 1.79
RAPGEF1-206ENST00000438647 C12orf29Q8N999 325 aa26.23■■□□□ 1.79
RAPGEF1-206ENST00000438647 MLKLQ8NB16 471 aa26.23■■□□□ 1.79
RAPGEF1-206ENST00000438647 USP13Q92995 863 aaPredicted RBP26.23■■□□□ 1.79
RAPGEF1-206ENST00000438647 MSANTD3Q96H12 275 aa26.23■■□□□ 1.79
RAPGEF1-206ENST00000438647 LRRC3BQ96PB8 259 aa26.23■■□□□ 1.79
RAPGEF1-206ENST00000438647 TWNKQ96RR1 684 aa26.23■■□□□ 1.79
RAPGEF1-206ENST00000438647 KCNK16Q96T55 309 aa26.23■■□□□ 1.79
RAPGEF1-206ENST00000438647 SRRTQ9BXP5 876 aaKnown RBP26.23■■□□□ 1.79
RAPGEF1-206ENST00000438647 FOXQ1Q9C009 403 aa26.23■■□□□ 1.79
RAPGEF1-206ENST00000438647 SMG9Q9H0W8 520 aaKnown RBP26.23■■□□□ 1.79
RAPGEF1-206ENST00000438647 NUP62CLQ9H1M0 184 aa26.23■■□□□ 1.79
RAPGEF1-206ENST00000438647 CISHQ9NSE2 258 aa26.23■■□□□ 1.79
RAPGEF1-206ENST00000438647 GREB1Q4ZG55 1949 aa26.23■■□□□ 1.79
RAPGEF1-206ENST00000438647 OBSL1O75147 1896 aa26.23■■□□□ 1.79
RAPGEF1-206ENST00000438647 P4HA2O15460 535 aa26.22■■□□□ 1.79
RAPGEF1-206ENST00000438647 FAM200BP0CF97 657 aa26.22■■□□□ 1.79
RAPGEF1-206ENST00000438647 CCDC192P0DO97 292 aa26.22■■□□□ 1.79
RAPGEF1-206ENST00000438647 YWHAQP27348 245 aa26.22■■□□□ 1.79
RAPGEF1-206ENST00000438647 MARSP56192 900 aaKnown RBP26.22■■□□□ 1.79
RAPGEF1-206ENST00000438647 UBXN2BQ14CS0 331 aa26.22■■□□□ 1.79
RAPGEF1-206ENST00000438647 C1orf228Q6PIY5 440 aa26.22■■□□□ 1.79
RAPGEF1-206ENST00000438647 PDZD8Q8NEN9 1154 aa26.22■■□□□ 1.79
RAPGEF1-206ENST00000438647 OVCA2Q8WZ82 227 aa26.22■■□□□ 1.79
RAPGEF1-206ENST00000438647 CYFIP2Q96F07 1278 aa26.22■■□□□ 1.79
RAPGEF1-206ENST00000438647 HNRNPABQ99729 332 aaKnown RBP26.22■■□□□ 1.79
RAPGEF1-206ENST00000438647 LTB4R2Q9NPC1 389 aa26.22■■□□□ 1.79
RAPGEF1-206ENST00000438647 LMBRD1Q9NUN5 540 aa26.22■■□□□ 1.79
RAPGEF1-206ENST00000438647 COMMD8Q9NX08 183 aa26.22■■□□□ 1.79
RAPGEF1-206ENST00000438647 PIAS3Q9Y6X2 628 aa26.22■■□□□ 1.79
RAPGEF1-206ENST00000438647 GOLGA6L22H0YM25 854 aa26.21■■□□□ 1.79
RAPGEF1-206ENST00000438647 NCAM2O15394 837 aa26.21■■□□□ 1.79
RAPGEF1-206ENST00000438647 YWHAEP62258 255 aaKnown RBP26.21■■□□□ 1.79
RAPGEF1-206ENST00000438647 TCF15Q12870 199 aa26.21■■□□□ 1.79
RAPGEF1-206ENST00000438647 IFRD2Q12894 506 aaPredicted RBP26.21■■□□□ 1.79
RAPGEF1-206ENST00000438647 TAF10Q12962 218 aa26.21■■□□□ 1.79
RAPGEF1-206ENST00000438647 DTWD2Q8NBA8 298 aa26.21■■□□□ 1.79
RAPGEF1-206ENST00000438647 WHAMMQ8TF30 809 aa26.21■■□□□ 1.79
RAPGEF1-206ENST00000438647 TATDN2Q93075 761 aa26.21■■□□□ 1.79
RAPGEF1-206ENST00000438647 C8orf33Q9H7E9 229 aaPredicted RBP26.21■■□□□ 1.79
RAPGEF1-206ENST00000438647 CSNK1G1Q9HCP0 422 aa26.21■■□□□ 1.79
RAPGEF1-206ENST00000438647 CCL26Q9Y258 94 aa26.21■■□□□ 1.79
RAPGEF1-206ENST00000438647 ZNF840PA6NDX5 716 aa26.2■■□□□ 1.78
RAPGEF1-206ENST00000438647 FAM170BA6NMN3 283 aa26.2■■□□□ 1.78
RAPGEF1-206ENST00000438647 DCNP07585 359 aaKnown RBP26.2■■□□□ 1.78
RAPGEF1-206ENST00000438647 HDCP19113 662 aa26.2■■□□□ 1.78
RAPGEF1-206ENST00000438647 TBXAS1P24557 533 aaPredicted RBP26.2■■□□□ 1.78
RAPGEF1-206ENST00000438647 ADORA2BP29275 332 aa26.2■■□□□ 1.78
RAPGEF1-206ENST00000438647 MAGEA9P43362 315 aa26.2■■□□□ 1.78
RAPGEF1-206ENST00000438647 SLC5A3P53794 718 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms