RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 NAP1L5Q96NT1 182 aaPredicted RBP17.12■□□□□ 0.33
SNRPB-202ENST00000438552 MYADMQ96S97 322 aa17.12■□□□□ 0.33
SNRPB-202ENST00000438552 ZSWIM1Q9BR11 485 aa17.12■□□□□ 0.33
SNRPB-202ENST00000438552 NAA15Q9BXJ9 866 aaKnown RBP17.12■□□□□ 0.33
SNRPB-202ENST00000438552 GPR88Q9GZN0 384 aa17.12■□□□□ 0.33
SNRPB-202ENST00000438552 PRKAG3Q9UGI9 489 aa17.12■□□□□ 0.33
SNRPB-202ENST00000438552 MRPS23Q9Y3D9 190 aaKnown RBP17.12■□□□□ 0.33
SNRPB-202ENST00000438552 A0A1B0GTH6 734 aa17.11■□□□□ 0.33
SNRPB-202ENST00000438552 A0A1W2PRU2 124 aa17.11■□□□□ 0.33
SNRPB-202ENST00000438552 O00370 1275 aa17.11■□□□□ 0.33
SNRPB-202ENST00000438552 MOSPD3O75425 235 aa17.11■□□□□ 0.33
SNRPB-202ENST00000438552 VDRP11473 427 aa17.11■□□□□ 0.33
SNRPB-202ENST00000438552 RFX1P22670 979 aa17.11■□□□□ 0.33
SNRPB-202ENST00000438552 GABRR2P28476 465 aa17.11■□□□□ 0.33
SNRPB-202ENST00000438552 SSTR3P32745 418 aaPredicted RBP17.11■□□□□ 0.33
SNRPB-202ENST00000438552 USP46P62068 366 aa17.11■□□□□ 0.33
SNRPB-202ENST00000438552 IFRD2Q12894 506 aaPredicted RBP17.11■□□□□ 0.33
SNRPB-202ENST00000438552 FILIP1LQ4L180 1135 aa17.11■□□□□ 0.33
SNRPB-202ENST00000438552 CYP4A22Q5TCH4 519 aa17.11■□□□□ 0.33
SNRPB-202ENST00000438552 SHKBP1Q8TBC3 707 aa17.11■□□□□ 0.33
SNRPB-202ENST00000438552 IL21Q9HBE4 155 aa17.11■□□□□ 0.33
SNRPB-202ENST00000438552 CSNK1G1Q9HCP0 422 aa17.11■□□□□ 0.33
SNRPB-202ENST00000438552 ACP6Q9NPH0 428 aa17.11■□□□□ 0.33
SNRPB-202ENST00000438552 AVENQ9NQS1 362 aaPredicted RBP17.11■□□□□ 0.33
SNRPB-202ENST00000438552 TSPAN16Q9UKR8 245 aa17.11■□□□□ 0.33
SNRPB-202ENST00000438552 NR2E1Q9Y466 385 aa17.11■□□□□ 0.33
SNRPB-202ENST00000438552 HELZP42694 1942 aaKnown RBP17.1■□□□□ 0.33
SNRPB-202ENST00000438552 LOC730098B7Z3J9 87 aa17.1■□□□□ 0.33
SNRPB-202ENST00000438552 NPR3P17342 541 aa17.1■□□□□ 0.33
SNRPB-202ENST00000438552 SLC5A3P53794 718 aa17.1■□□□□ 0.33
SNRPB-202ENST00000438552 POLR2FP61218 127 aaKnown RBP17.1■□□□□ 0.33
SNRPB-202ENST00000438552 CYP4F8P98187 520 aa17.1■□□□□ 0.33
SNRPB-202ENST00000438552 DRAP1Q14919 205 aaPredicted RBP17.1■□□□□ 0.33
SNRPB-202ENST00000438552 DENND5BQ6ZUT9 1274 aa17.1■□□□□ 0.33
SNRPB-202ENST00000438552 GAREM2Q75VX8 874 aa17.1■□□□□ 0.33
SNRPB-202ENST00000438552 OTOP3Q7RTS5 596 aa17.1■□□□□ 0.33
SNRPB-202ENST00000438552 GPRIN1Q7Z2K8 1008 aa17.1■□□□□ 0.33
SNRPB-202ENST00000438552 TTC30AQ86WT1 665 aa17.1■□□□□ 0.33
SNRPB-202ENST00000438552 NPAS3Q8IXF0 933 aa17.1■□□□□ 0.33
SNRPB-202ENST00000438552 LEMD2Q8NC56 503 aa17.1■□□□□ 0.33
SNRPB-202ENST00000438552 NEK11Q8NG66 645 aa17.1■□□□□ 0.33
SNRPB-202ENST00000438552 FGF13Q92913 245 aa17.1■□□□□ 0.33
SNRPB-202ENST00000438552 TRMT2BQ96GJ1 504 aaKnown RBP17.1■□□□□ 0.33
SNRPB-202ENST00000438552 UHRF1Q96T88 793 aaPredicted RBP17.1■□□□□ 0.33
SNRPB-202ENST00000438552 NLRC4Q9NPP4 1024 aa17.1■□□□□ 0.33
SNRPB-202ENST00000438552 USTQ9Y2C2 406 aa17.1■□□□□ 0.33
SNRPB-202ENST00000438552 HHLA1C9JL84 531 aa17.09■□□□□ 0.33
SNRPB-202ENST00000438552 F8VZ95 297 aa17.09■□□□□ 0.33
SNRPB-202ENST00000438552 FOXN3O00409 490 aaPredicted RBP17.09■□□□□ 0.33
SNRPB-202ENST00000438552 ZNF197O14709 1029 aa17.09■□□□□ 0.33
SNRPB-202ENST00000438552 TADA3O75528 432 aa17.09■□□□□ 0.33
SNRPB-202ENST00000438552 GNA15P30679 374 aa17.09■□□□□ 0.33
SNRPB-202ENST00000438552 BCAT1P54687 386 aa17.09■□□□□ 0.33
SNRPB-202ENST00000438552 TEAD2Q15562 447 aa17.09■□□□□ 0.33
SNRPB-202ENST00000438552 STXBP5Q5T5C0 1151 aa17.09■□□□□ 0.33
SNRPB-202ENST00000438552 POTEHQ6S545 545 aa17.09■□□□□ 0.33
SNRPB-202ENST00000438552 GPIHBP1Q8IV16 184 aa17.09■□□□□ 0.33
SNRPB-202ENST00000438552 ACSF2Q96CM8 615 aaPredicted RBP17.09■□□□□ 0.33
SNRPB-202ENST00000438552 CEP295NLQ96MC4 621 aa17.09■□□□□ 0.33
SNRPB-202ENST00000438552 GCNAQ96QF7 691 aa17.09■□□□□ 0.33
SNRPB-202ENST00000438552 DUSP16Q9BY84 665 aa17.09■□□□□ 0.33
SNRPB-202ENST00000438552 IFNKQ9P0W0 207 aa17.09■□□□□ 0.33
SNRPB-202ENST00000438552 HESX1Q9UBX0 185 aa17.09■□□□□ 0.33
SNRPB-202ENST00000438552 CDH7Q9ULB5 785 aa17.09■□□□□ 0.33
SNRPB-202ENST00000438552 KIAA1257Q9ULG3 409 aa17.09■□□□□ 0.33
SNRPB-202ENST00000438552 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.09■□□□□ 0.33
SNRPB-202ENST00000438552 A0A0C4DFX4 3053 aa17.08■□□□□ 0.33
SNRPB-202ENST00000438552 C19orf67A6NJJ6 358 aa17.08■□□□□ 0.32
SNRPB-202ENST00000438552 M0QYV0 167 aa17.08■□□□□ 0.32
SNRPB-202ENST00000438552 TULP2O00295 520 aa17.08■□□□□ 0.32
SNRPB-202ENST00000438552 TNFRSF10BO14763 440 aa17.08■□□□□ 0.32
SNRPB-202ENST00000438552 CYP26A1O43174 497 aa17.08■□□□□ 0.32
SNRPB-202ENST00000438552 THAP12O43422 761 aa17.08■□□□□ 0.32
SNRPB-202ENST00000438552 MICAL2O94851 1124 aa17.08■□□□□ 0.32
SNRPB-202ENST00000438552 FGF19O95750 216 aa17.08■□□□□ 0.32
SNRPB-202ENST00000438552 CDC25CP30307 473 aa17.08■□□□□ 0.32
SNRPB-202ENST00000438552 UBASH3AP57075 661 aa17.08■□□□□ 0.32
SNRPB-202ENST00000438552 LCLAT1Q6UWP7 414 aa17.08■□□□□ 0.32
SNRPB-202ENST00000438552 TMEM150AQ86TG1 271 aa17.08■□□□□ 0.32
SNRPB-202ENST00000438552 FAM71AQ8IYT1 594 aa17.08■□□□□ 0.32
SNRPB-202ENST00000438552 NUP93Q8N1F7 819 aa17.08■□□□□ 0.32
SNRPB-202ENST00000438552 ANKRD52Q8NB46 1076 aa17.08■□□□□ 0.32
SNRPB-202ENST00000438552 ST13P5Q8NFI4 369 aaPredicted RBP17.08■□□□□ 0.32
SNRPB-202ENST00000438552 SCAMP5Q8TAC9 235 aa17.08■□□□□ 0.32
SNRPB-202ENST00000438552 UBA3Q8TBC4 463 aa17.08■□□□□ 0.32
SNRPB-202ENST00000438552 MCRS1Q96EZ8 462 aa17.08■□□□□ 0.32
SNRPB-202ENST00000438552 MYRFLQ96LU7 910 aa17.08■□□□□ 0.32
SNRPB-202ENST00000438552 TTLL2Q9BWV7 592 aa17.08■□□□□ 0.32
SNRPB-202ENST00000438552 ATXN3LQ9H3M9 355 aa17.08■□□□□ 0.32
SNRPB-202ENST00000438552 SLITRK6Q9H5Y7 841 aa17.08■□□□□ 0.32
SNRPB-202ENST00000438552 CD320Q9NPF0 282 aa17.08■□□□□ 0.32
SNRPB-202ENST00000438552 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.08■□□□□ 0.32
SNRPB-202ENST00000438552 UXTQ9UBK9 157 aaPredicted RBP17.08■□□□□ 0.32
SNRPB-202ENST00000438552 F11P03951 625 aa17.07■□□□□ 0.32
SNRPB-202ENST00000438552 CLCN1P35523 988 aa17.07■□□□□ 0.32
SNRPB-202ENST00000438552 JAM2P57087 298 aa17.07■□□□□ 0.32
SNRPB-202ENST00000438552 PDE4CQ08493 712 aa17.07■□□□□ 0.32
SNRPB-202ENST00000438552 BST2Q10589 180 aaKnown RBP17.07■□□□□ 0.32
SNRPB-202ENST00000438552 NR1I3Q14994 352 aa17.07■□□□□ 0.32
SNRPB-202ENST00000438552 SLC47A2Q86VL8 602 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms