RNA–Protein interactions for RNA: ENST00000438412.5

HCG18-236, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,440 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-236ENST00000438412 ZNF518BQ9C0D4 1074 aa13.32□□□□□ -0.28
HCG18-236ENST00000438412 ABCF3Q9NUQ8 709 aa13.32□□□□□ -0.28
HCG18-236ENST00000438412 TPX2Q9ULW0 747 aaKnown RBP13.32□□□□□ -0.28
HCG18-236ENST00000438412 MYO18AQ92614 2054 aaKnown RBP13.32□□□□□ -0.28
HCG18-236ENST00000438412 ZSWIM8A7E2V4 1837 aa13.32□□□□□ -0.28
HCG18-236ENST00000438412 A0A1W2PPM1 405 aa13.31□□□□□ -0.28
HCG18-236ENST00000438412 F5H423 210 aaPredicted RBP13.31□□□□□ -0.28
HCG18-236ENST00000438412 AVILO75366 819 aa13.31□□□□□ -0.28
HCG18-236ENST00000438412 PDGFRBP09619 1106 aa13.31□□□□□ -0.28
HCG18-236ENST00000438412 GPX6P59796 221 aa13.31□□□□□ -0.28
HCG18-236ENST00000438412 MYO1EQ12965 1108 aa13.31□□□□□ -0.28
HCG18-236ENST00000438412 PKN2Q16513 984 aaKnown RBP13.31□□□□□ -0.28
HCG18-236ENST00000438412 OR6J1Q8NGC5 347 aa13.31□□□□□ -0.28
HCG18-236ENST00000438412 CPT1BQ92523 772 aa13.31□□□□□ -0.28
HCG18-236ENST00000438412 MAML3Q96JK9 1138 aa13.31□□□□□ -0.28
HCG18-236ENST00000438412 SERPINB12Q96P63 405 aa13.31□□□□□ -0.28
HCG18-236ENST00000438412 KLF6Q99612 283 aaPredicted RBP13.31□□□□□ -0.28
HCG18-236ENST00000438412 TRIM56Q9BRZ2 755 aaKnown RBP13.31□□□□□ -0.28
HCG18-236ENST00000438412 LHX5Q9H2C1 402 aa13.31□□□□□ -0.28
HCG18-236ENST00000438412 RNF39Q9H2S5 420 aa13.31□□□□□ -0.28
HCG18-236ENST00000438412 A0A1B0GUA9 196 aa13.31□□□□□ -0.28
HCG18-236ENST00000438412 GOLGA6L7A0A1B0GV03 622 aa13.31□□□□□ -0.28
HCG18-236ENST00000438412 VGLL3A8MV65 326 aa13.31□□□□□ -0.28
HCG18-236ENST00000438412 RASA4BC9J798 803 aa13.31□□□□□ -0.28
HCG18-236ENST00000438412 DYNC1LI2O43237 492 aaPredicted RBP13.31□□□□□ -0.28
HCG18-236ENST00000438412 RASA4O43374 803 aa13.31□□□□□ -0.28
HCG18-236ENST00000438412 RPL22P35268 128 aaKnown RBP13.31□□□□□ -0.28
HCG18-236ENST00000438412 CDH6P55285 790 aa13.31□□□□□ -0.28
HCG18-236ENST00000438412 LRRC38Q5VT99 294 aa13.31□□□□□ -0.28
HCG18-236ENST00000438412 FAM47EQ6ZV65 393 aa13.31□□□□□ -0.28
HCG18-236ENST00000438412 C7orf31Q8N865 590 aa13.31□□□□□ -0.28
HCG18-236ENST00000438412 NGRNQ9NPE2 291 aaKnown RBP13.31□□□□□ -0.28
HCG18-236ENST00000438412 HOMER3Q9NSC5 361 aa13.31□□□□□ -0.28
HCG18-236ENST00000438412 EURLQ9NYK6 297 aa13.31□□□□□ -0.28
HCG18-236ENST00000438412 GRID1Q9ULK0 1009 aa13.31□□□□□ -0.28
HCG18-236ENST00000438412 STRIP2Q9ULQ0 834 aa13.31□□□□□ -0.28
HCG18-236ENST00000438412 CLUHO75153 1309 aa13.31□□□□□ -0.28
HCG18-236ENST00000438412 ZNF638Q14966 1978 aaKnown RBP13.31□□□□□ -0.28
HCG18-236ENST00000438412 MED7O43513 233 aa13.3□□□□□ -0.28
HCG18-236ENST00000438412 TRUB2O95900 331 aaKnown RBP13.3□□□□□ -0.28
HCG18-236ENST00000438412 CCDC130P13994 396 aa13.3□□□□□ -0.28
HCG18-236ENST00000438412 PDGFRAP16234 1089 aa13.3□□□□□ -0.28
HCG18-236ENST00000438412 LMO2P25791 158 aa13.3□□□□□ -0.28
HCG18-236ENST00000438412 BASP1P80723 227 aaKnown RBP13.3□□□□□ -0.28
HCG18-236ENST00000438412 FAM133BQ5BKY9 247 aaKnown RBP13.3□□□□□ -0.28
HCG18-236ENST00000438412 ANKRD20A8PQ5CZ79 823 aa13.3□□□□□ -0.28
HCG18-236ENST00000438412 NUGGCQ68CJ6 796 aa13.3□□□□□ -0.28
HCG18-236ENST00000438412 CCDC121Q6ZUS5 278 aa13.3□□□□□ -0.28
HCG18-236ENST00000438412 IGDCC3Q8IVU1 814 aa13.3□□□□□ -0.28
HCG18-236ENST00000438412 SPATA18Q8TC71 538 aa13.3□□□□□ -0.28
HCG18-236ENST00000438412 ROPN1BQ9BZX4 212 aaPredicted RBP13.3□□□□□ -0.28
HCG18-236ENST00000438412 ROPN1Q9HAT0 212 aaPredicted RBP13.3□□□□□ -0.28
HCG18-236ENST00000438412 FLRT1Q9NZU1 646 aa13.3□□□□□ -0.28
HCG18-236ENST00000438412 CPA4Q9UI42 421 aa13.3□□□□□ -0.28
HCG18-236ENST00000438412 BARX2Q9UMQ3 279 aaPredicted RBP13.3□□□□□ -0.28
HCG18-236ENST00000438412 PPME1Q9Y570 386 aa13.3□□□□□ -0.28
HCG18-236ENST00000438412 H0YHG0 523 aa13.3□□□□□ -0.28
HCG18-236ENST00000438412 GOLGA8RI6L899 631 aa13.3□□□□□ -0.28
HCG18-236ENST00000438412 FOXN2P32314 431 aa13.3□□□□□ -0.28
HCG18-236ENST00000438412 CETN2P41208 172 aa13.3□□□□□ -0.28
HCG18-236ENST00000438412 BEX3Q00994 111 aa13.3□□□□□ -0.28
HCG18-236ENST00000438412 FAM187BQ17R55 369 aa13.3□□□□□ -0.28
HCG18-236ENST00000438412 TAOK1Q7L7X3 1001 aa13.3□□□□□ -0.28
HCG18-236ENST00000438412 NKD2Q969F2 451 aaPredicted RBP13.3□□□□□ -0.28
HCG18-236ENST00000438412 CENPTQ96BT3 561 aa13.3□□□□□ -0.28
HCG18-236ENST00000438412 MCRS1Q96EZ8 462 aa13.3□□□□□ -0.28
HCG18-236ENST00000438412 NFKBIZQ9BYH8 718 aa13.3□□□□□ -0.28
HCG18-236ENST00000438412 MFHAS1Q9Y4C4 1052 aa13.3□□□□□ -0.28
HCG18-236ENST00000438412 HEY1Q9Y5J3 304 aa13.3□□□□□ -0.28
HCG18-236ENST00000438412 SPTLC1O15269 473 aa13.29□□□□□ -0.28
HCG18-236ENST00000438412 ITGAVP06756 1048 aa13.29□□□□□ -0.28
HCG18-236ENST00000438412 ADORA2BP29275 332 aa13.29□□□□□ -0.28
HCG18-236ENST00000438412 WDR4P57081 412 aaKnown RBP13.29□□□□□ -0.28
HCG18-236ENST00000438412 EIF3EP60228 445 aaKnown RBP13.29□□□□□ -0.28
HCG18-236ENST00000438412 ACVR2BQ13705 512 aa13.29□□□□□ -0.28
HCG18-236ENST00000438412 CCL14Q16627 93 aa13.29□□□□□ -0.28
HCG18-236ENST00000438412 CCDC14Q49A88 953 aa13.29□□□□□ -0.28
HCG18-236ENST00000438412 CGB2Q6NT52 195 aa13.29□□□□□ -0.28
HCG18-236ENST00000438412 CCT6BQ92526 530 aa13.29□□□□□ -0.28
HCG18-236ENST00000438412 L3MBTL3Q96JM7 780 aaPredicted RBP13.29□□□□□ -0.28
HCG18-236ENST00000438412 TMPRSS4Q9NRS4 437 aa13.29□□□□□ -0.28
HCG18-236ENST00000438412 HAUS2Q9NVX0 235 aa13.29□□□□□ -0.28
HCG18-236ENST00000438412 DDX56Q9NY93 547 aaKnown RBP13.29□□□□□ -0.28
HCG18-236ENST00000438412 FARP1Q9Y4F1 1045 aaPredicted RBP13.29□□□□□ -0.28
HCG18-236ENST00000438412 C2CD4BA6NLJ0 364 aa13.29□□□□□ -0.28
HCG18-236ENST00000438412 RBP3P10745 1247 aa13.29□□□□□ -0.28
HCG18-236ENST00000438412 FGFR1P11362 822 aa13.29□□□□□ -0.28
HCG18-236ENST00000438412 IBSPP21815 317 aaPredicted RBP13.29□□□□□ -0.28
HCG18-236ENST00000438412 CAV1Q03135 178 aa13.29□□□□□ -0.28
HCG18-236ENST00000438412 SMAD1Q15797 465 aaKnown RBP13.29□□□□□ -0.28
HCG18-236ENST00000438412 BBS9Q3SYG4 887 aa13.29□□□□□ -0.28
HCG18-236ENST00000438412 PPP6R3Q5H9R7 873 aaPredicted RBP13.29□□□□□ -0.28
HCG18-236ENST00000438412 BBS12Q6ZW61 710 aa13.29□□□□□ -0.28
HCG18-236ENST00000438412 CATSPER4Q7RTX7 472 aa13.29□□□□□ -0.28
HCG18-236ENST00000438412 PIGWQ7Z7B1 504 aa13.29□□□□□ -0.28
HCG18-236ENST00000438412 EXOC8Q8IYI6 725 aa13.29□□□□□ -0.28
HCG18-236ENST00000438412 AGGF1Q8N302 714 aaeCLIP13.29□□□□□ -0.28
HCG18-236ENST00000438412 SHCBP1Q8NEM2 672 aa13.29□□□□□ -0.28
HCG18-236ENST00000438412 DNAJB3Q8WWF6 145 aa13.29□□□□□ -0.28
HCG18-236ENST00000438412 RSAD2Q8WXG1 361 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms