RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 PRUNE1Q86TP1 453 aa6.96□□□□□ -1.3
CSDE1-205ENST00000438362 TRABD2AQ86V40 505 aa6.96□□□□□ -1.3
CSDE1-205ENST00000438362 CATSPER1Q8NEC5 780 aa6.96□□□□□ -1.3
CSDE1-205ENST00000438362 CHST13Q8NET6 341 aa6.96□□□□□ -1.3
CSDE1-205ENST00000438362 IL31RAQ8NI17 732 aa6.96□□□□□ -1.3
CSDE1-205ENST00000438362 APOPT1Q96IL0 206 aa6.96□□□□□ -1.3
CSDE1-205ENST00000438362 SLITRK1Q96PX8 696 aa6.96□□□□□ -1.3
CSDE1-205ENST00000438362 DRC3Q9H069 523 aa6.96□□□□□ -1.3
CSDE1-205ENST00000438362 KIAA1683Q9H0B3 1180 aa6.96□□□□□ -1.3
CSDE1-205ENST00000438362 DEFB129Q9H1M3 183 aa6.96□□□□□ -1.3
CSDE1-205ENST00000438362 KIF9Q9HAQ2 790 aa6.96□□□□□ -1.3
CSDE1-205ENST00000438362 ZDHHC18Q9NUE0 388 aa6.96□□□□□ -1.3
CSDE1-205ENST00000438362 CYP39A1Q9NYL5 469 aa6.96□□□□□ -1.3
CSDE1-205ENST00000438362 LRCH1Q9Y2L9 728 aa6.96□□□□□ -1.3
CSDE1-205ENST00000438362 CDY2AQ9Y6F7 541 aa6.96□□□□□ -1.3
CSDE1-205ENST00000438362 CDY1Q9Y6F8 540 aa6.96□□□□□ -1.3
CSDE1-205ENST00000438362 RPTORQ8N122 1335 aa6.96□□□□□ -1.3
CSDE1-205ENST00000438362 CRYBG1Q9Y4K1 1723 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 SNED1Q8TER0 1413 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 IGLV3-22A0A075B6J6 115 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 ARHGAP10A1A4S6 786 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 ADCY3O60266 1144 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 POLBP06746 335 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 VDRP11473 427 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 ALADP13716 330 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 ETS1P14921 441 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 TCF7P36402 384 aaPredicted RBP6.95□□□□□ -1.3
CSDE1-205ENST00000438362 NCKAP1LP55160 1127 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 TAS2R40P59535 323 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 PTPN11Q06124 597 aaPredicted RBP6.95□□□□□ -1.3
CSDE1-205ENST00000438362 BIRC2Q13490 618 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 TAF12Q16514 161 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 TRMT5Q32P41 509 aaKnown RBP6.95□□□□□ -1.3
CSDE1-205ENST00000438362 ZDHHC24Q6UX98 284 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 TRIM67Q6ZTA4 783 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 TMPRSS6Q8IU80 811 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 MICALL2Q8IY33 904 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 NACA2Q9H009 215 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 TRPV6Q9H1D0 765 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 VPS33BQ9H267 617 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 MCM8Q9UJA3 840 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 KBTBD13C9JR72 458 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 NEMP1O14524 444 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 GLRA3O75311 464 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 LYPLA2O95372 231 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 GH1P01241 217 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 EIF4BP23588 611 aaKnown RBP6.95□□□□□ -1.3
CSDE1-205ENST00000438362 BACE1P56817 501 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 NOMO3P69849 1222 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 POU5F1BQ06416 359 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 SLC34A1Q06495 639 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 BNIP1Q12981 228 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 ZNF772Q68DY9 489 aaPredicted RBP6.95□□□□□ -1.3
CSDE1-205ENST00000438362 EFCAB12Q6NXP0 572 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 MPZL3Q6UWV2 235 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 PIGWQ7Z7B1 504 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 BRSK2Q8IWQ3 736 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 ALLCQ8N6M5 410 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 RXFP2Q8WXD0 754 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 TNIP3Q96KP6 325 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 SHCBP1LQ9BZQ2 653 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 FHDC1Q9C0D6 1143 aaPredicted RBP6.95□□□□□ -1.3
CSDE1-205ENST00000438362 TAGLN3Q9UI15 199 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 R3HDM2Q9Y2K5 976 aaKnown RBP6.95□□□□□ -1.3
CSDE1-205ENST00000438362 AIM2O14862 343 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 MGRN1O60291 552 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 HBP1O60381 514 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 ZNF189O75820 626 aaPredicted RBP6.95□□□□□ -1.3
CSDE1-205ENST00000438362 CDK16Q00536 496 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 DSG1Q02413 1049 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 SPIRE1Q08AE8 756 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 FAAP100Q0VG06 881 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 BMPR2Q13873 1038 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 GOLGA7BQ2TAP0 167 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 NAIF1Q69YI7 327 aaPredicted RBP6.95□□□□□ -1.3
CSDE1-205ENST00000438362 DSTYKQ6XUX3 929 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 METTL23Q86XA0 190 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 PHF13Q86YI8 300 aaPredicted RBP6.95□□□□□ -1.3
CSDE1-205ENST00000438362 C12orf50Q8NA57 414 aaPredicted RBP6.95□□□□□ -1.3
CSDE1-205ENST00000438362 PDZD8Q8NEN9 1154 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 CEP70Q8NHQ1 597 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 ZNF398Q8TD17 642 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 SCG3Q8WXD2 468 aaKnown RBP6.95□□□□□ -1.3
CSDE1-205ENST00000438362 SDCCAG3Q96C92 435 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 MFSD14AQ96MC6 490 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 ZNF560Q96MR9 790 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 SRPK1Q96SB4 655 aaKnown RBP6.95□□□□□ -1.3
CSDE1-205ENST00000438362 BCAS3Q9H6U6 928 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 GPATCH2LQ9NWQ4 482 aa6.95□□□□□ -1.3
CSDE1-205ENST00000438362 ASTN2O75129 1339 aaPredicted RBP6.95□□□□□ -1.3
CSDE1-205ENST00000438362 APOC4-APOC2K7ER74 178 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 PFDN6O15212 129 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 MAGEB2O15479 319 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 EDF1O60869 148 aaKnown RBP6.94□□□□□ -1.3
CSDE1-205ENST00000438362 MTA2O94776 668 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 APOC2P02655 101 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 ZCCHC18P0CG32 403 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 ENO3P13929 434 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-205ENST00000438362 CDC25CP30307 473 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 RPL7AP62424 266 aaKnown RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 890.1 ms