RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 CYP4A22Q5TCH4 519 aa12.15□□□□□ -0.46
SNHG3-202ENST00000437681 SCARA5Q6ZMJ2 495 aa12.15□□□□□ -0.46
SNHG3-202ENST00000437681 PAQR9Q6ZVX9 377 aa12.15□□□□□ -0.46
SNHG3-202ENST00000437681 TADA2BQ86TJ2 420 aa12.15□□□□□ -0.46
SNHG3-202ENST00000437681 TMC8Q8IU68 726 aa12.15□□□□□ -0.46
SNHG3-202ENST00000437681 ZDHHC17Q8IUH5 632 aa12.15□□□□□ -0.46
SNHG3-202ENST00000437681 ADHFE1Q8IWW8 467 aa12.15□□□□□ -0.46
SNHG3-202ENST00000437681 NUP93Q8N1F7 819 aa12.15□□□□□ -0.46
SNHG3-202ENST00000437681 TMEM130Q8N3G9 435 aa12.15□□□□□ -0.46
SNHG3-202ENST00000437681 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.15□□□□□ -0.46
SNHG3-202ENST00000437681 HEXIM2Q96MH2 286 aaKnown RBP12.15□□□□□ -0.46
SNHG3-202ENST00000437681 GCNAQ96QF7 691 aa12.15□□□□□ -0.46
SNHG3-202ENST00000437681 TMEM209Q96SK2 561 aa12.15□□□□□ -0.46
SNHG3-202ENST00000437681 TTYH3Q9C0H2 523 aa12.15□□□□□ -0.46
SNHG3-202ENST00000437681 KIF9Q9HAQ2 790 aa12.15□□□□□ -0.46
SNHG3-202ENST00000437681 GTF3C4Q9UKN8 822 aa12.15□□□□□ -0.46
SNHG3-202ENST00000437681 USP15Q9Y4E8 981 aaPredicted RBP12.15□□□□□ -0.46
SNHG3-202ENST00000437681 HELZP42694 1942 aaKnown RBP12.15□□□□□ -0.46
SNHG3-202ENST00000437681 SLC38A8A6NNN8 435 aa12.14□□□□□ -0.47
SNHG3-202ENST00000437681 LOC730098B7Z3J9 87 aa12.14□□□□□ -0.47
SNHG3-202ENST00000437681 ATP1A3P13637 1013 aa12.14□□□□□ -0.47
SNHG3-202ENST00000437681 PRKCIP41743 596 aa12.14□□□□□ -0.47
SNHG3-202ENST00000437681 GSCP56915 257 aaPredicted RBP12.14□□□□□ -0.47
SNHG3-202ENST00000437681 ARHGAP15Q53QZ3 475 aa12.14□□□□□ -0.47
SNHG3-202ENST00000437681 KLHDC10Q6PID8 442 aa12.14□□□□□ -0.47
SNHG3-202ENST00000437681 ACOT1Q86TX2 421 aa12.14□□□□□ -0.47
SNHG3-202ENST00000437681 MRFAP1L1Q96HT8 127 aa12.14□□□□□ -0.47
SNHG3-202ENST00000437681 IRX2Q9BZI1 471 aaPredicted RBP12.14□□□□□ -0.47
SNHG3-202ENST00000437681 AIPL1Q9NZN9 384 aa12.14□□□□□ -0.47
SNHG3-202ENST00000437681 SCML2Q9UQR0 700 aa12.14□□□□□ -0.47
SNHG3-202ENST00000437681 USP3Q9Y6I4 520 aa12.14□□□□□ -0.47
SNHG3-202ENST00000437681 TNFRSF10BO14763 440 aa12.14□□□□□ -0.47
SNHG3-202ENST00000437681 PDGFRBP09619 1106 aa12.14□□□□□ -0.47
SNHG3-202ENST00000437681 ZDHHC11BP0C7U3 371 aa12.14□□□□□ -0.47
SNHG3-202ENST00000437681 ATF6P18850 670 aa12.14□□□□□ -0.47
SNHG3-202ENST00000437681 CDC25BP30305 580 aa12.14□□□□□ -0.47
SNHG3-202ENST00000437681 MTA1Q13330 715 aa12.14□□□□□ -0.47
SNHG3-202ENST00000437681 DRAP1Q14919 205 aaPredicted RBP12.14□□□□□ -0.47
SNHG3-202ENST00000437681 RARS2Q5T160 578 aaKnown RBP12.14□□□□□ -0.47
SNHG3-202ENST00000437681 LLGL2Q6P1M3 1020 aa12.14□□□□□ -0.47
SNHG3-202ENST00000437681 TMEM270Q6UE05 265 aa12.14□□□□□ -0.47
SNHG3-202ENST00000437681 MTSS1LQ765P7 747 aa12.14□□□□□ -0.47
SNHG3-202ENST00000437681 CCDC186Q7Z3E2 898 aa12.14□□□□□ -0.47
SNHG3-202ENST00000437681 MSANTD4Q8NCY6 345 aa12.14□□□□□ -0.47
SNHG3-202ENST00000437681 ZNF397Q8NF99 534 aaPredicted RBP12.14□□□□□ -0.47
SNHG3-202ENST00000437681 ACSF2Q96CM8 615 aaPredicted RBP12.14□□□□□ -0.47
SNHG3-202ENST00000437681 FAM84AQ96KN4 292 aa12.14□□□□□ -0.47
SNHG3-202ENST00000437681 TWNKQ96RR1 684 aa12.14□□□□□ -0.47
SNHG3-202ENST00000437681 DPEP3Q9H4B8 488 aa12.14□□□□□ -0.47
SNHG3-202ENST00000437681 ABI2Q9NYB9 513 aaPredicted RBP12.14□□□□□ -0.47
SNHG3-202ENST00000437681 FSHRP23945 695 aa12.13□□□□□ -0.47
SNHG3-202ENST00000437681 HNRNPH3P31942 346 aaKnown RBP12.13□□□□□ -0.47
SNHG3-202ENST00000437681 MGAT5BQ3V5L5 792 aa12.13□□□□□ -0.47
SNHG3-202ENST00000437681 TJAP1Q5JTD0 557 aa12.13□□□□□ -0.47
SNHG3-202ENST00000437681 PM20D1Q6GTS8 502 aa12.13□□□□□ -0.47
SNHG3-202ENST00000437681 PTCRAQ6ISU1 281 aaPredicted RBP12.13□□□□□ -0.47
SNHG3-202ENST00000437681 DENND5BQ6ZUT9 1274 aa12.13□□□□□ -0.47
SNHG3-202ENST00000437681 ARCQ7LC44 396 aa12.13□□□□□ -0.47
SNHG3-202ENST00000437681 MED10Q9BTT4 135 aa12.13□□□□□ -0.47
SNHG3-202ENST00000437681 PIDD1Q9HB75 910 aa12.13□□□□□ -0.47
SNHG3-202ENST00000437681 CAPN11Q9UMQ6 739 aa12.13□□□□□ -0.47
SNHG3-202ENST00000437681 ZKSCAN5Q9Y2L8 839 aa12.13□□□□□ -0.47
SNHG3-202ENST00000437681 NOTCH4Q99466 2003 aa12.13□□□□□ -0.47
SNHG3-202ENST00000437681 HHLA1C9JL84 531 aa12.13□□□□□ -0.47
SNHG3-202ENST00000437681 AP1G2O75843 785 aa12.13□□□□□ -0.47
SNHG3-202ENST00000437681 GLI1P08151 1106 aa12.13□□□□□ -0.47
SNHG3-202ENST00000437681 HMGA1P17096 107 aaKnown RBP12.13□□□□□ -0.47
SNHG3-202ENST00000437681 ACAT1P24752 427 aaKnown RBP12.13□□□□□ -0.47
SNHG3-202ENST00000437681 GTF2F1P35269 517 aaKnown RBP eCLIP12.13□□□□□ -0.47
SNHG3-202ENST00000437681 MLLT6P55198 1093 aaPredicted RBP12.13□□□□□ -0.47
SNHG3-202ENST00000437681 ARPP19P56211 112 aa12.13□□□□□ -0.47
SNHG3-202ENST00000437681 CYP27A1Q02318 531 aa12.13□□□□□ -0.47
SNHG3-202ENST00000437681 CLEC20AQ6ZU45 233 aa12.13□□□□□ -0.47
SNHG3-202ENST00000437681 PDZD4Q76G19 769 aaPredicted RBP12.13□□□□□ -0.47
SNHG3-202ENST00000437681 DNAJB7Q7Z6W7 309 aaPredicted RBP12.13□□□□□ -0.47
SNHG3-202ENST00000437681 DDX42Q86XP3 938 aaKnown RBP eCLIP12.13□□□□□ -0.47
SNHG3-202ENST00000437681 CREBRFQ8IUR6 639 aa12.13□□□□□ -0.47
SNHG3-202ENST00000437681 ATAD1Q8NBU5 361 aa12.13□□□□□ -0.47
SNHG3-202ENST00000437681 SLC2A14Q8TDB8 520 aa12.13□□□□□ -0.47
SNHG3-202ENST00000437681 NOX5Q96PH1 765 aa12.13□□□□□ -0.47
SNHG3-202ENST00000437681 KRT82Q9NSB4 513 aa12.13□□□□□ -0.47
SNHG3-202ENST00000437681 CLIC5Q9NZA1 410 aa12.13□□□□□ -0.47
SNHG3-202ENST00000437681 IGSF9Q9P2J2 1179 aa12.13□□□□□ -0.47
SNHG3-202ENST00000437681 DNMT3BQ9UBC3 853 aaKnown RBP12.13□□□□□ -0.47
SNHG3-202ENST00000437681 CEP83Q9Y592 693 aa12.13□□□□□ -0.47
SNHG3-202ENST00000437681 SPDYE4A6NLX3 237 aa12.12□□□□□ -0.47
SNHG3-202ENST00000437681 F11P03951 625 aa12.12□□□□□ -0.47
SNHG3-202ENST00000437681 OR4Q2P0C623 313 aa12.12□□□□□ -0.47
SNHG3-202ENST00000437681 CD58P19256 250 aa12.12□□□□□ -0.47
SNHG3-202ENST00000437681 GNA15P30679 374 aa12.12□□□□□ -0.47
SNHG3-202ENST00000437681 GRIK1P39086 918 aa12.12□□□□□ -0.47
SNHG3-202ENST00000437681 PSMC1P62191 440 aaKnown RBP12.12□□□□□ -0.47
SNHG3-202ENST00000437681 SKIV2LQ15477 1246 aaKnown RBP12.12□□□□□ -0.47
SNHG3-202ENST00000437681 PPP1R26Q5T8A7 1209 aaPredicted RBP12.12□□□□□ -0.47
SNHG3-202ENST00000437681 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.12□□□□□ -0.47
SNHG3-202ENST00000437681 SLC35F5Q8WV83 523 aa12.12□□□□□ -0.47
SNHG3-202ENST00000437681 SMOQ99835 787 aa12.12□□□□□ -0.47
SNHG3-202ENST00000437681 CNGB3Q9NQW8 809 aa12.12□□□□□ -0.47
SNHG3-202ENST00000437681 HMGXB4Q9UGU5 601 aa12.12□□□□□ -0.47
SNHG3-202ENST00000437681 CDH7Q9ULB5 785 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms