RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 CAPRIN2Q6IMN6 1127 aaKnown RBP11.6□□□□□ -0.55
SCN4A-201ENST00000435607 ANKMY2Q8IV38 441 aa11.6□□□□□ -0.55
SCN4A-201ENST00000435607 ZNF333Q96JL9 665 aa11.6□□□□□ -0.55
SCN4A-201ENST00000435607 EPS8L2Q9H6S3 715 aa11.6□□□□□ -0.55
SCN4A-201ENST00000435607 PSMC3IPQ9P2W1 217 aaPredicted RBP11.6□□□□□ -0.55
SCN4A-201ENST00000435607 CPDO75976 1380 aa11.6□□□□□ -0.55
SCN4A-201ENST00000435607 GUCY1B2O75343 617 aa11.6□□□□□ -0.55
SCN4A-201ENST00000435607 FGFR1P11362 822 aa11.6□□□□□ -0.55
SCN4A-201ENST00000435607 RINLQ6ZS11 566 aa11.6□□□□□ -0.55
SCN4A-201ENST00000435607 KCTD17Q8N5Z5 321 aa11.6□□□□□ -0.55
SCN4A-201ENST00000435607 MYMKA6NI61 221 aa11.6□□□□□ -0.55
SCN4A-201ENST00000435607 CD2BP2O95400 341 aaKnown RBP11.6□□□□□ -0.55
SCN4A-201ENST00000435607 ENO1P06733 434 aaKnown RBP11.6□□□□□ -0.55
SCN4A-201ENST00000435607 PDHA1P08559 390 aa11.6□□□□□ -0.55
SCN4A-201ENST00000435607 LTKP29376 864 aa11.6□□□□□ -0.55
SCN4A-201ENST00000435607 NFE2Q16621 373 aaPredicted RBP11.6□□□□□ -0.55
SCN4A-201ENST00000435607 OTOAQ7RTW8 1153 aa11.6□□□□□ -0.55
SCN4A-201ENST00000435607 CAMK1DQ8IU85 385 aa11.6□□□□□ -0.55
SCN4A-201ENST00000435607 RUBCNQ92622 972 aa11.6□□□□□ -0.55
SCN4A-201ENST00000435607 REXO5Q96IC2 774 aaKnown RBP11.6□□□□□ -0.55
SCN4A-201ENST00000435607 MOV10L1Q9BXT6 1211 aaKnown RBP11.6□□□□□ -0.55
SCN4A-201ENST00000435607 PARD6BQ9BYG5 372 aa11.6□□□□□ -0.55
SCN4A-201ENST00000435607 AVENQ9NQS1 362 aaPredicted RBP11.6□□□□□ -0.55
SCN4A-201ENST00000435607 USP18Q9UMW8 372 aa11.6□□□□□ -0.55
SCN4A-201ENST00000435607 TNFSF13BQ9Y275 285 aa11.6□□□□□ -0.55
SCN4A-201ENST00000435607 POMCP01189 267 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 SERPINB1P30740 379 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 PRCPP42785 496 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 PRKCEQ02156 737 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 PDIA5Q14554 519 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 ZNF484Q5JVG2 852 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 CENPLQ8N0S6 344 aaPredicted RBP11.59□□□□□ -0.55
SCN4A-201ENST00000435607 RBBP8NLQ8NC74 664 aaPredicted RBP11.59□□□□□ -0.55
SCN4A-201ENST00000435607 RDM1Q8NG50 284 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 FAM49BQ9NUQ9 324 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 TBC1D23Q9NUY8 699 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 GPN3Q9UHW5 284 aaPredicted RBP11.59□□□□□ -0.55
SCN4A-201ENST00000435607 EXTL3O43909 919 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 CYP2A7P20853 494 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 CNGA2Q16280 664 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 SH3GL2Q99962 352 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 ETNK1Q9HBU6 452 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 APEX2Q9UBZ4 518 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 CLASP1Q7Z460 1538 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 SF3B1O75533 1304 aaKnown RBP eCLIP11.59□□□□□ -0.55
SCN4A-201ENST00000435607 PDZK1P1A8MUH7 402 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 TM9SF1O15321 606 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 AP1G2O75843 785 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 RCN1Q15293 331 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 SNRNP35Q16560 246 aaKnown RBP11.59□□□□□ -0.55
SCN4A-201ENST00000435607 MROH8Q9H579 483 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 PDGFCQ9NRA1 345 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 PEG3Q9GZU2 1588 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 ATP7BP35670 1465 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 HIST1H2ABP04908 130 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 FLT3P36888 993 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 LHX1P48742 406 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 HIST3H2AQ7L7L0 130 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 HIST1H2ACQ93077 130 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 REPS1Q96D71 796 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 UBE2OQ9C0C9 1292 aaKnown RBP11.59□□□□□ -0.55
SCN4A-201ENST00000435607 TMEM260Q9NX78 707 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 IFNGR2P38484 337 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 PI16Q6UXB8 463 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 MYOZ2Q9NPC6 264 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 SAMD9Q5K651 1589 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 FAM220BPB1ANY3 271 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 WEE1P30291 646 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 RXRGP48443 463 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 RHOAP61586 193 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 KDSRQ06136 332 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 BIKQ13323 160 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 RD3Q7Z3Z2 195 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 DHX40Q8IX18 779 aaKnown RBP11.59□□□□□ -0.55
SCN4A-201ENST00000435607 SLC16A10Q8TF71 515 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 CGRRF1Q99675 332 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 PRKD2Q9BZL6 878 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 PIGUQ9H490 435 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 DDIT4Q9NX09 232 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 DPP3Q9NY33 737 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 DRG1Q9Y295 367 aaKnown RBP11.59□□□□□ -0.55
SCN4A-201ENST00000435607 NR3C2P08235 984 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 PACS1Q6VY07 963 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 NEDD1Q8NHV4 660 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 CNDP1Q96KN2 507 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 SIK3Q9Y2K2 1263 aa11.59□□□□□ -0.55
SCN4A-201ENST00000435607 SNRPAP09012 282 aaKnown RBP11.58□□□□□ -0.56
SCN4A-201ENST00000435607 CYP2A6P11509 494 aaPredicted RBP11.58□□□□□ -0.56
SCN4A-201ENST00000435607 MAGEA10P43363 369 aaPredicted RBP11.58□□□□□ -0.56
SCN4A-201ENST00000435607 LMBRD2Q68DH5 695 aaPredicted RBP11.58□□□□□ -0.56
SCN4A-201ENST00000435607 COLGALT2Q8IYK4 626 aa11.58□□□□□ -0.56
SCN4A-201ENST00000435607 TBCDQ9BTW9 1192 aa11.58□□□□□ -0.56
SCN4A-201ENST00000435607 ENOPH1Q9UHY7 261 aa11.58□□□□□ -0.56
SCN4A-201ENST00000435607 ARL2BPQ9Y2Y0 163 aa11.58□□□□□ -0.56
SCN4A-201ENST00000435607 CENPXA8MT69 81 aa11.58□□□□□ -0.56
SCN4A-201ENST00000435607 CHURC1-FNTBB4DL54 471 aa11.58□□□□□ -0.56
SCN4A-201ENST00000435607 TBX3O15119 743 aa11.58□□□□□ -0.56
SCN4A-201ENST00000435607 NKRFO15226 690 aaKnown RBP eCLIP11.58□□□□□ -0.56
SCN4A-201ENST00000435607 RGS5O15539 181 aa11.58□□□□□ -0.56
SCN4A-201ENST00000435607 USP1O94782 785 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms