RNA–Protein interactions for RNA: ENST00000434424.5

PTPRK-212, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 555 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-212ENST00000434424 NELL2Q99435 816 aa8.23□□□□□ -1.09
PTPRK-212ENST00000434424 SIK2Q9H0K1 926 aa8.23□□□□□ -1.09
PTPRK-212ENST00000434424 KCNH6Q9H252 994 aa8.23□□□□□ -1.09
PTPRK-212ENST00000434424 SLC6A15Q9H2J7 730 aa8.23□□□□□ -1.09
PTPRK-212ENST00000434424 MBD1Q9UIS9 605 aaPredicted RBP8.23□□□□□ -1.09
PTPRK-212ENST00000434424 ASAP1Q9ULH1 1129 aa8.23□□□□□ -1.09
PTPRK-212ENST00000434424 PCDHA5Q9Y5H7 936 aa8.23□□□□□ -1.09
PTPRK-212ENST00000434424 HS3ST4Q9Y661 456 aa8.23□□□□□ -1.09
PTPRK-212ENST00000434424 NCOA2Q15596 1464 aa8.23□□□□□ -1.09
PTPRK-212ENST00000434424 CEP162Q5TB80 1403 aa8.22□□□□□ -1.09
PTPRK-212ENST00000434424 NCOA3Q9Y6Q9 1424 aa8.22□□□□□ -1.09
PTPRK-212ENST00000434424 ROBO1Q9Y6N7 1651 aa8.22□□□□□ -1.09
PTPRK-212ENST00000434424 A6NCN8 305 aa8.22□□□□□ -1.09
PTPRK-212ENST00000434424 M0QYG6 137 aa8.22□□□□□ -1.09
PTPRK-212ENST00000434424 ACTL6BO94805 426 aa8.22□□□□□ -1.09
PTPRK-212ENST00000434424 SASH1O94885 1247 aa8.22□□□□□ -1.09
PTPRK-212ENST00000434424 HAUS5O94927 633 aa8.22□□□□□ -1.09
PTPRK-212ENST00000434424 DDX58O95786 925 aaKnown RBP8.22□□□□□ -1.09
PTPRK-212ENST00000434424 ZNF135P52742 658 aaPredicted RBP8.22□□□□□ -1.09
PTPRK-212ENST00000434424 AP2B1P63010 937 aa8.22□□□□□ -1.09
PTPRK-212ENST00000434424 MAPK7Q13164 816 aa8.22□□□□□ -1.09
PTPRK-212ENST00000434424 ARHGEF7Q14155 803 aa8.22□□□□□ -1.09
PTPRK-212ENST00000434424 CRB2Q5IJ48 1285 aa8.22□□□□□ -1.09
PTPRK-212ENST00000434424 TMTC4Q5T4D3 741 aa8.22□□□□□ -1.09
PTPRK-212ENST00000434424 ZDHHC24Q6UX98 284 aa8.22□□□□□ -1.09
PTPRK-212ENST00000434424 NGDNQ8NEJ9 315 aaKnown RBP8.22□□□□□ -1.09
PTPRK-212ENST00000434424 NUDT10Q8NFP7 164 aa8.22□□□□□ -1.09
PTPRK-212ENST00000434424 SMCR8Q8TEV9 937 aaPredicted RBP8.22□□□□□ -1.09
PTPRK-212ENST00000434424 RAPGEF4Q8WZA2 1011 aa8.22□□□□□ -1.09
PTPRK-212ENST00000434424 ZBTB8AQ96BR9 441 aa8.22□□□□□ -1.09
PTPRK-212ENST00000434424 NUDT11Q96G61 164 aa8.22□□□□□ -1.09
PTPRK-212ENST00000434424 DDX23Q9BUQ8 820 aaKnown RBP8.22□□□□□ -1.09
PTPRK-212ENST00000434424 TINAGL1Q9GZM7 467 aaPredicted RBP8.22□□□□□ -1.09
PTPRK-212ENST00000434424 ZSCAN32Q9NX65 697 aa8.22□□□□□ -1.09
PTPRK-212ENST00000434424 NCDNQ9UBB6 729 aa8.22□□□□□ -1.09
PTPRK-212ENST00000434424 SLC45A2Q9UMX9 530 aa8.22□□□□□ -1.09
PTPRK-212ENST00000434424 LOC102723971A0A1B0GUV8 181 aa8.21□□□□□ -1.1
PTPRK-212ENST00000434424 CXorf49A8MYA2 514 aaPredicted RBP8.21□□□□□ -1.1
PTPRK-212ENST00000434424 USP1O94782 785 aa8.21□□□□□ -1.1
PTPRK-212ENST00000434424 GLP2RO95838 553 aa8.21□□□□□ -1.1
PTPRK-212ENST00000434424 TBX18O95935 607 aa8.21□□□□□ -1.1
PTPRK-212ENST00000434424 AMHP03971 560 aa8.21□□□□□ -1.1
PTPRK-212ENST00000434424 PIM1P11309 404 aaPredicted RBP8.21□□□□□ -1.1
PTPRK-212ENST00000434424 XRCC6P12956 609 aaKnown RBP eCLIP8.21□□□□□ -1.1
PTPRK-212ENST00000434424 ALAS1P13196 640 aa8.21□□□□□ -1.1
PTPRK-212ENST00000434424 GYS1P13807 737 aa8.21□□□□□ -1.1
PTPRK-212ENST00000434424 TPH1P17752 444 aa8.21□□□□□ -1.1
PTPRK-212ENST00000434424 SLC6A4P31645 630 aa8.21□□□□□ -1.1
PTPRK-212ENST00000434424 GZMKP49863 264 aa8.21□□□□□ -1.1
PTPRK-212ENST00000434424 CPT1AP50416 773 aa8.21□□□□□ -1.1
PTPRK-212ENST00000434424 ATP2C1P98194 919 aaPredicted RBP8.21□□□□□ -1.1
PTPRK-212ENST00000434424 ZNF827Q17R98 1081 aa8.21□□□□□ -1.1
PTPRK-212ENST00000434424 TRIM71Q2Q1W2 868 aaKnown RBP8.21□□□□□ -1.1
PTPRK-212ENST00000434424 NBPF8Q3BBV2 869 aa8.21□□□□□ -1.1
PTPRK-212ENST00000434424 GAGE13Q4V321 117 aa8.21□□□□□ -1.1
PTPRK-212ENST00000434424 RAP1GAP2Q684P5 730 aa8.21□□□□□ -1.1
PTPRK-212ENST00000434424 UBE3BQ7Z3V4 1068 aa8.21□□□□□ -1.1
PTPRK-212ENST00000434424 FRMD5Q7Z6J6 570 aa8.21□□□□□ -1.1
PTPRK-212ENST00000434424 REXO1L1PQ8IX06 675 aa8.21□□□□□ -1.1
PTPRK-212ENST00000434424 ANKRD53Q8N9V6 530 aa8.21□□□□□ -1.1
PTPRK-212ENST00000434424 HTRA1Q92743 480 aa8.21□□□□□ -1.1
PTPRK-212ENST00000434424 SCAMP4Q969E2 229 aa8.21□□□□□ -1.1
PTPRK-212ENST00000434424 RTKNQ9BST9 563 aa8.21□□□□□ -1.1
PTPRK-212ENST00000434424 CARD11Q9BXL7 1154 aa8.21□□□□□ -1.1
PTPRK-212ENST00000434424 CPEB1Q9BZB8 566 aaKnown RBP8.21□□□□□ -1.1
PTPRK-212ENST00000434424 KIAA1683Q9H0B3 1180 aa8.21□□□□□ -1.1
PTPRK-212ENST00000434424 OR10A2Q9H208 303 aa8.21□□□□□ -1.1
PTPRK-212ENST00000434424 PABPC3Q9H361 631 aaKnown RBP8.21□□□□□ -1.1
PTPRK-212ENST00000434424 PLEKHA5Q9HAU0 1116 aa8.21□□□□□ -1.1
PTPRK-212ENST00000434424 CAPN11Q9UMQ6 739 aa8.21□□□□□ -1.1
PTPRK-212ENST00000434424 ARHGAP31Q2M1Z3 1444 aa8.2□□□□□ -1.1
PTPRK-212ENST00000434424 SETD1AO15047 1707 aaKnown RBP8.2□□□□□ -1.1
PTPRK-212ENST00000434424 CAMSAP2Q08AD1 1489 aa8.2□□□□□ -1.1
PTPRK-212ENST00000434424 CHEK2O96017 543 aa8.2□□□□□ -1.1
PTPRK-212ENST00000434424 SNRPA1P09661 255 aaKnown RBP8.2□□□□□ -1.1
PTPRK-212ENST00000434424 CKBP12277 381 aa8.2□□□□□ -1.1
PTPRK-212ENST00000434424 PI3P19957 117 aa8.2□□□□□ -1.1
PTPRK-212ENST00000434424 AARSP49588 968 aaKnown RBP eCLIP8.2□□□□□ -1.1
PTPRK-212ENST00000434424 RRADP55042 308 aa8.2□□□□□ -1.1
PTPRK-212ENST00000434424 WNT3P56703 355 aa8.2□□□□□ -1.1
PTPRK-212ENST00000434424 VAMP2P63027 116 aa8.2□□□□□ -1.1
PTPRK-212ENST00000434424 NUCB1Q02818 461 aa8.2□□□□□ -1.1
PTPRK-212ENST00000434424 UBE3AQ05086 875 aa8.2□□□□□ -1.1
PTPRK-212ENST00000434424 CUL4BQ13620 913 aa8.2□□□□□ -1.1
PTPRK-212ENST00000434424 IDI1Q13907 227 aa8.2□□□□□ -1.1
PTPRK-212ENST00000434424 DLGAP5Q15398 846 aa8.2□□□□□ -1.1
PTPRK-212ENST00000434424 SLC5A9Q2M3M2 681 aa8.2□□□□□ -1.1
PTPRK-212ENST00000434424 UTP14CQ5TAP6 766 aaKnown RBP8.2□□□□□ -1.1
PTPRK-212ENST00000434424 AGBL4Q5VU57 503 aa8.2□□□□□ -1.1
PTPRK-212ENST00000434424 PLAG1Q6DJT9 500 aa8.2□□□□□ -1.1
PTPRK-212ENST00000434424 C16orf54Q6UWD8 224 aa8.2□□□□□ -1.1
PTPRK-212ENST00000434424 SLC44A2Q8IWA5 706 aaPredicted RBP8.2□□□□□ -1.1
PTPRK-212ENST00000434424 CCDC28AQ8IWP9 274 aa8.2□□□□□ -1.1
PTPRK-212ENST00000434424 CMTM4Q8IZR5 234 aa8.2□□□□□ -1.1
PTPRK-212ENST00000434424 SPATA5L1Q9BVQ7 753 aa8.2□□□□□ -1.1
PTPRK-212ENST00000434424 XYLT2Q9H1B5 865 aa8.2□□□□□ -1.1
PTPRK-212ENST00000434424 TAF1DQ9H5J8 278 aaPredicted RBP8.2□□□□□ -1.1
PTPRK-212ENST00000434424 L2HGDHQ9H9P8 463 aa8.2□□□□□ -1.1
PTPRK-212ENST00000434424 CA14Q9ULX7 337 aa8.2□□□□□ -1.1
PTPRK-212ENST00000434424 AGAP1Q9UPQ3 857 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms