RNA–Protein interactions for RNA: ENST00000433753.4

SEMA3B-204, Transcript of semaphorin 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-204ENST00000433753 PDK4Q16654 411 aa18.2■□□□□ 0.5
SEMA3B-204ENST00000433753 VSIG1Q86XK7 387 aa18.2■□□□□ 0.5
SEMA3B-204ENST00000433753 PALM2Q8IXS6 379 aa18.2■□□□□ 0.5
SEMA3B-204ENST00000433753 KIRREL3Q8IZU9 778 aa18.2■□□□□ 0.5
SEMA3B-204ENST00000433753 SPATA18Q8TC71 538 aa18.2■□□□□ 0.5
SEMA3B-204ENST00000433753 MAGEC3Q8TD91 643 aa18.2■□□□□ 0.5
SEMA3B-204ENST00000433753 FZD8Q9H461 694 aa18.2■□□□□ 0.5
SEMA3B-204ENST00000433753 SLC17A7Q9P2U7 560 aa18.2■□□□□ 0.5
SEMA3B-204ENST00000433753 MCM3APO60318 1980 aa18.2■□□□□ 0.5
SEMA3B-204ENST00000433753 IGKV6-21A0A0C4DH24 114 aa18.2■□□□□ 0.5
SEMA3B-204ENST00000433753 TGFB3P10600 412 aa18.2■□□□□ 0.5
SEMA3B-204ENST00000433753 MSH2P43246 934 aa18.2■□□□□ 0.5
SEMA3B-204ENST00000433753 ARL4CP56559 192 aa18.2■□□□□ 0.5
SEMA3B-204ENST00000433753 RNASELQ05823 741 aaKnown RBP18.2■□□□□ 0.5
SEMA3B-204ENST00000433753 NR1H3Q13133 447 aa18.2■□□□□ 0.5
SEMA3B-204ENST00000433753 MOGSQ13724 837 aa18.2■□□□□ 0.5
SEMA3B-204ENST00000433753 EFHC2Q5JST6 749 aa18.2■□□□□ 0.5
SEMA3B-204ENST00000433753 CELF3Q5SZQ8 465 aaKnown RBP18.2■□□□□ 0.5
SEMA3B-204ENST00000433753 MAP1SQ66K74 1059 aaPredicted RBP18.2■□□□□ 0.5
SEMA3B-204ENST00000433753 TRNP1Q6NT89 227 aa18.2■□□□□ 0.5
SEMA3B-204ENST00000433753 GIMAP7Q8NHV1 300 aa18.2■□□□□ 0.5
SEMA3B-204ENST00000433753 UTP4Q969X6 686 aaKnown RBP18.2■□□□□ 0.5
SEMA3B-204ENST00000433753 OTUD5Q96G74 571 aa18.2■□□□□ 0.5
SEMA3B-204ENST00000433753 FGD4Q96M96 766 aa18.2■□□□□ 0.5
SEMA3B-204ENST00000433753 HEXIM2Q96MH2 286 aaKnown RBP18.2■□□□□ 0.5
SEMA3B-204ENST00000433753 GPRC5DQ9NZD1 345 aa18.2■□□□□ 0.5
SEMA3B-204ENST00000433753 USP18Q9UMW8 372 aa18.2■□□□□ 0.5
SEMA3B-204ENST00000433753 STARD13Q9Y3M8 1113 aa18.2■□□□□ 0.5
SEMA3B-204ENST00000433753 PTPN11Q06124 597 aaPredicted RBP18.19■□□□□ 0.5
SEMA3B-204ENST00000433753 FAM102AQ5T9C2 384 aaPredicted RBP18.19■□□□□ 0.5
SEMA3B-204ENST00000433753 ZNF449Q6P9G9 518 aa18.19■□□□□ 0.5
SEMA3B-204ENST00000433753 MOB2Q70IA6 237 aa18.19■□□□□ 0.5
SEMA3B-204ENST00000433753 OTOAQ7RTW8 1153 aa18.19■□□□□ 0.5
SEMA3B-204ENST00000433753 ZNF75CPQ92670 426 aaPredicted RBP18.19■□□□□ 0.5
SEMA3B-204ENST00000433753 NUMBLQ9Y6R0 609 aa18.19■□□□□ 0.5
SEMA3B-204ENST00000433753 MAGEB2O15479 319 aa18.19■□□□□ 0.5
SEMA3B-204ENST00000433753 EDF1O60869 148 aaKnown RBP18.19■□□□□ 0.5
SEMA3B-204ENST00000433753 UNC5CO95185 931 aa18.19■□□□□ 0.5
SEMA3B-204ENST00000433753 STAG3L1P0CL83 205 aa18.19■□□□□ 0.5
SEMA3B-204ENST00000433753 MBTD1Q05BQ5 628 aa18.19■□□□□ 0.5
SEMA3B-204ENST00000433753 NOL9Q5SY16 702 aaKnown RBP18.19■□□□□ 0.5
SEMA3B-204ENST00000433753 C1orf228Q6PIY5 440 aa18.19■□□□□ 0.5
SEMA3B-204ENST00000433753 TCP10LQ8TDR4 215 aa18.19■□□□□ 0.5
SEMA3B-204ENST00000433753 FAM167AQ96KS9 214 aa18.19■□□□□ 0.5
SEMA3B-204ENST00000433753 LHX5Q9H2C1 402 aa18.19■□□□□ 0.5
SEMA3B-204ENST00000433753 ELP3Q9H9T3 547 aa18.19■□□□□ 0.5
SEMA3B-204ENST00000433753 NPHS2Q9NP85 383 aa18.19■□□□□ 0.5
SEMA3B-204ENST00000433753 SMG5Q9UPR3 1016 aaKnown RBP18.19■□□□□ 0.5
SEMA3B-204ENST00000433753 SURF1Q15526 300 aa18.19■□□□□ 0.5
SEMA3B-204ENST00000433753 PLEKHG4Q58EX7 1191 aa18.19■□□□□ 0.5
SEMA3B-204ENST00000433753 C12orf29Q8N999 325 aa18.19■□□□□ 0.5
SEMA3B-204ENST00000433753 GRAMD1AQ96CP6 724 aa18.19■□□□□ 0.5
SEMA3B-204ENST00000433753 CLMNQ96JQ2 1002 aa18.19■□□□□ 0.5
SEMA3B-204ENST00000433753 LRRC37BQ96QE4 947 aa18.19■□□□□ 0.5
SEMA3B-204ENST00000433753 PLCD4Q9BRC7 762 aa18.19■□□□□ 0.5
SEMA3B-204ENST00000433753 BCO2Q9BYV7 579 aa18.19■□□□□ 0.5
SEMA3B-204ENST00000433753 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.19■□□□□ 0.5
SEMA3B-204ENST00000433753 GPATCH2LQ9NWQ4 482 aa18.19■□□□□ 0.5
SEMA3B-204ENST00000433753 SLC24A2Q9UI40 661 aa18.19■□□□□ 0.5
SEMA3B-204ENST00000433753 DCTN4Q9UJW0 460 aa18.19■□□□□ 0.5
SEMA3B-204ENST00000433753 CBX6O95503 412 aa18.18■□□□□ 0.5
SEMA3B-204ENST00000433753 ANP32DO95626 131 aa18.18■□□□□ 0.5
SEMA3B-204ENST00000433753 TRUB2O95900 331 aaKnown RBP18.18■□□□□ 0.5
SEMA3B-204ENST00000433753 RIPK1Q13546 671 aa18.18■□□□□ 0.5
SEMA3B-204ENST00000433753 ACVR2BQ13705 512 aa18.18■□□□□ 0.5
SEMA3B-204ENST00000433753 DPYSL3Q14195 570 aa18.18■□□□□ 0.5
SEMA3B-204ENST00000433753 FAXCQ5TGI0 409 aa18.18■□□□□ 0.5
SEMA3B-204ENST00000433753 ATP11CQ8NB49 1132 aa18.18■□□□□ 0.5
SEMA3B-204ENST00000433753 TMEM176AQ96HP8 235 aa18.18■□□□□ 0.5
SEMA3B-204ENST00000433753 ADPGKQ9BRR6 497 aa18.18■□□□□ 0.5
SEMA3B-204ENST00000433753 MED7O43513 233 aa18.18■□□□□ 0.5
SEMA3B-204ENST00000433753 RNF8O76064 485 aa18.18■□□□□ 0.5
SEMA3B-204ENST00000433753 ELK3P41970 407 aa18.18■□□□□ 0.5
SEMA3B-204ENST00000433753 RGS7P49802 495 aa18.18■□□□□ 0.5
SEMA3B-204ENST00000433753 CDH6P55285 790 aa18.18■□□□□ 0.5
SEMA3B-204ENST00000433753 ATP11AP98196 1134 aa18.18■□□□□ 0.5
SEMA3B-204ENST00000433753 DARS2Q6PI48 645 aaKnown RBP18.18■□□□□ 0.5
SEMA3B-204ENST00000433753 N4BP2L2Q92802 583 aaPredicted RBP18.18■□□□□ 0.5
SEMA3B-204ENST00000433753 C2orf40Q9H1Z8 148 aa18.18■□□□□ 0.5
SEMA3B-204ENST00000433753 ZMYND8Q9ULU4 1186 aaPredicted RBP18.18■□□□□ 0.5
SEMA3B-204ENST00000433753 ANK1P16157 1881 aa18.17■□□□□ 0.5
SEMA3B-204ENST00000433753 A0A087WZ62 844 aa18.17■□□□□ 0.5
SEMA3B-204ENST00000433753 ADM5C9JUS6 153 aa18.17■□□□□ 0.5
SEMA3B-204ENST00000433753 CNMDO75829 334 aa18.17■□□□□ 0.5
SEMA3B-204ENST00000433753 CCNB1P14635 433 aa18.17■□□□□ 0.5
SEMA3B-204ENST00000433753 CYP3A5P20815 502 aa18.17■□□□□ 0.5
SEMA3B-204ENST00000433753 GPD2P43304 727 aa18.17■□□□□ 0.5
SEMA3B-204ENST00000433753 PCGF5Q86SE9 256 aa18.17■□□□□ 0.5
SEMA3B-204ENST00000433753 CCDC33Q8N5R6 958 aa18.17■□□□□ 0.5
SEMA3B-204ENST00000433753 CMASQ8NFW8 434 aaPredicted RBP18.17■□□□□ 0.5
SEMA3B-204ENST00000433753 DCAKDQ8WVC6 231 aa18.17■□□□□ 0.5
SEMA3B-204ENST00000433753 PTPRN2Q92932 1015 aa18.17■□□□□ 0.5
SEMA3B-204ENST00000433753 FDXACB1Q9BRP7 624 aaPredicted RBP18.17■□□□□ 0.5
SEMA3B-204ENST00000433753 CXCL16Q9H2A7 254 aa18.17■□□□□ 0.5
SEMA3B-204ENST00000433753 IFT122Q9HBG6 1241 aa18.17■□□□□ 0.5
SEMA3B-204ENST00000433753 RNF19AQ9NV58 838 aa18.17■□□□□ 0.5
SEMA3B-204ENST00000433753 CILPO75339 1184 aa18.17■□□□□ 0.5
SEMA3B-204ENST00000433753 FAM155BO75949 473 aa18.17■□□□□ 0.5
SEMA3B-204ENST00000433753 SETDB1Q15047 1291 aa18.17■□□□□ 0.5
SEMA3B-204ENST00000433753 SCYL2Q6P3W7 929 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms