RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 TMC8Q8IU68 726 aa16.43■□□□□ 0.22
TREX1-201ENST00000433541 RNF135Q8IUD6 432 aa16.43■□□□□ 0.22
TREX1-201ENST00000433541 ZDHHC14Q8IZN3 488 aa16.43■□□□□ 0.22
TREX1-201ENST00000433541 NUP93Q8N1F7 819 aa16.43■□□□□ 0.22
TREX1-201ENST00000433541 TTC16Q8NEE8 873 aa16.43■□□□□ 0.22
TREX1-201ENST00000433541 NEK11Q8NG66 645 aa16.43■□□□□ 0.22
TREX1-201ENST00000433541 SHKBP1Q8TBC3 707 aa16.43■□□□□ 0.22
TREX1-201ENST00000433541 CEP295NLQ96MC4 621 aa16.43■□□□□ 0.22
TREX1-201ENST00000433541 SLITRK1Q96PX8 696 aa16.43■□□□□ 0.22
TREX1-201ENST00000433541 TRPC7Q9HCX4 862 aa16.43■□□□□ 0.22
TREX1-201ENST00000433541 AVENQ9NQS1 362 aaPredicted RBP16.43■□□□□ 0.22
TREX1-201ENST00000433541 FAM207AQ9NSI2 230 aaPredicted RBP16.43■□□□□ 0.22
TREX1-201ENST00000433541 ANAPC1Q9H1A4 1944 aa16.43■□□□□ 0.22
TREX1-201ENST00000433541 NUP210Q8TEM1 1887 aaPredicted RBP16.42■□□□□ 0.22
TREX1-201ENST00000433541 C19orf67A6NJJ6 358 aa16.42■□□□□ 0.22
TREX1-201ENST00000433541 THAP12O43422 761 aa16.42■□□□□ 0.22
TREX1-201ENST00000433541 NOL4O94818 638 aa16.42■□□□□ 0.22
TREX1-201ENST00000433541 ASGR2P07307 311 aa16.42■□□□□ 0.22
TREX1-201ENST00000433541 ACO1P21399 889 aaKnown RBP16.42■□□□□ 0.22
TREX1-201ENST00000433541 BRD2P25440 801 aaKnown RBP16.42■□□□□ 0.22
TREX1-201ENST00000433541 SLC5A3P53794 718 aa16.42■□□□□ 0.22
TREX1-201ENST00000433541 EPHA5P54756 1037 aa16.42■□□□□ 0.22
TREX1-201ENST00000433541 SYCP1Q15431 976 aa16.42■□□□□ 0.22
TREX1-201ENST00000433541 CLEC20AQ6ZU45 233 aa16.42■□□□□ 0.22
TREX1-201ENST00000433541 GAREM2Q75VX8 874 aa16.42■□□□□ 0.22
TREX1-201ENST00000433541 MTSS1LQ765P7 747 aa16.42■□□□□ 0.22
TREX1-201ENST00000433541 UBR7Q8N806 425 aa16.42■□□□□ 0.22
TREX1-201ENST00000433541 FBXO32Q969P5 355 aa16.42■□□□□ 0.22
TREX1-201ENST00000433541 TRMT2BQ96GJ1 504 aaKnown RBP16.42■□□□□ 0.22
TREX1-201ENST00000433541 SMOQ99835 787 aa16.42■□□□□ 0.22
TREX1-201ENST00000433541 CD320Q9NPF0 282 aa16.42■□□□□ 0.22
TREX1-201ENST00000433541 TMEM30AQ9NV96 361 aa16.42■□□□□ 0.22
TREX1-201ENST00000433541 GDE1Q9NZC3 331 aa16.42■□□□□ 0.22
TREX1-201ENST00000433541 TSPAN16Q9UKR8 245 aa16.42■□□□□ 0.22
TREX1-201ENST00000433541 KIAA1257Q9ULG3 409 aa16.42■□□□□ 0.22
TREX1-201ENST00000433541 FHOD1Q9Y613 1164 aa16.42■□□□□ 0.22
TREX1-201ENST00000433541 M0QYV0 167 aa16.41■□□□□ 0.22
TREX1-201ENST00000433541 TNFRSF10AO00220 468 aa16.41■□□□□ 0.22
TREX1-201ENST00000433541 DPYSL4O14531 572 aa16.41■□□□□ 0.22
TREX1-201ENST00000433541 MED7O43513 233 aa16.41■□□□□ 0.22
TREX1-201ENST00000433541 BEST1O76090 585 aa16.41■□□□□ 0.22
TREX1-201ENST00000433541 CALCAP01258 141 aa16.41■□□□□ 0.22
TREX1-201ENST00000433541 HMGA1P17096 107 aaKnown RBP16.41■□□□□ 0.22
TREX1-201ENST00000433541 RFX1P22670 979 aa16.41■□□□□ 0.22
TREX1-201ENST00000433541 YWHAQP27348 245 aa16.41■□□□□ 0.22
TREX1-201ENST00000433541 GNA15P30679 374 aa16.41■□□□□ 0.22
TREX1-201ENST00000433541 KLK7P49862 253 aa16.41■□□□□ 0.22
TREX1-201ENST00000433541 BCAT1P54687 386 aa16.41■□□□□ 0.22
TREX1-201ENST00000433541 KCNMA1Q12791 1236 aa16.41■□□□□ 0.22
TREX1-201ENST00000433541 STXBP5Q5T5C0 1151 aa16.41■□□□□ 0.22
TREX1-201ENST00000433541 KLHDC7AQ5VTJ3 777 aa16.41■□□□□ 0.22
TREX1-201ENST00000433541 ARHGAP17Q68EM7 881 aa16.41■□□□□ 0.22
TREX1-201ENST00000433541 RNF214Q8ND24 703 aa16.41■□□□□ 0.22
TREX1-201ENST00000433541 SPAG5Q96R06 1193 aa16.41■□□□□ 0.22
TREX1-201ENST00000433541 KXD1Q9BQD3 176 aa16.41■□□□□ 0.22
TREX1-201ENST00000433541 LRRC3Q9BY71 257 aa16.41■□□□□ 0.22
TREX1-201ENST00000433541 DUSP16Q9BY84 665 aa16.41■□□□□ 0.22
TREX1-201ENST00000433541 GPR88Q9GZN0 384 aa16.41■□□□□ 0.22
TREX1-201ENST00000433541 HSD3B7Q9H2F3 369 aa16.41■□□□□ 0.22
TREX1-201ENST00000433541 SIX2Q9NPC8 291 aa16.41■□□□□ 0.22
TREX1-201ENST00000433541 TRPM5Q9NZQ8 1165 aa16.41■□□□□ 0.22
TREX1-201ENST00000433541 EPS15L1Q9UBC2 864 aa16.41■□□□□ 0.22
TREX1-201ENST00000433541 MUTYHQ9UIF7 546 aa16.41■□□□□ 0.22
TREX1-201ENST00000433541 RNF225M0QZC1 329 aaPredicted RBP16.4■□□□□ 0.22
TREX1-201ENST00000433541 MICAL2O94851 1124 aa16.4■□□□□ 0.22
TREX1-201ENST00000433541 UCHL3P15374 230 aa16.4■□□□□ 0.22
TREX1-201ENST00000433541 AVPR1AP37288 418 aa16.4■□□□□ 0.22
TREX1-201ENST00000433541 POLR2FP61218 127 aaKnown RBP16.4■□□□□ 0.22
TREX1-201ENST00000433541 USP46P62068 366 aa16.4■□□□□ 0.22
TREX1-201ENST00000433541 PTK2Q05397 1052 aa16.4■□□□□ 0.22
TREX1-201ENST00000433541 BST2Q10589 180 aaKnown RBP16.4■□□□□ 0.22
TREX1-201ENST00000433541 DRAP1Q14919 205 aaPredicted RBP16.4■□□□□ 0.22
TREX1-201ENST00000433541 STILQ15468 1287 aa16.4■□□□□ 0.22
TREX1-201ENST00000433541 GPIHBP1Q8IV16 184 aa16.4■□□□□ 0.22
TREX1-201ENST00000433541 MAB21L3Q8N8X9 362 aa16.4■□□□□ 0.22
TREX1-201ENST00000433541 ANKRD52Q8NB46 1076 aa16.4■□□□□ 0.22
TREX1-201ENST00000433541 SCAMP5Q8TAC9 235 aa16.4■□□□□ 0.22
TREX1-201ENST00000433541 UBA3Q8TBC4 463 aa16.4■□□□□ 0.22
TREX1-201ENST00000433541 ZSCAN18Q8TBC5 510 aaPredicted RBP16.4■□□□□ 0.22
TREX1-201ENST00000433541 RSAD2Q8WXG1 361 aa16.4■□□□□ 0.22
TREX1-201ENST00000433541 PDCL3Q9H2J4 239 aa16.4■□□□□ 0.22
TREX1-201ENST00000433541 FBXO44Q9H4M3 255 aa16.4■□□□□ 0.22
TREX1-201ENST00000433541 IL21Q9HBE4 155 aa16.4■□□□□ 0.22
TREX1-201ENST00000433541 NLRC4Q9NPP4 1024 aa16.4■□□□□ 0.22
TREX1-201ENST00000433541 AJAP1Q9UKB5 411 aaPredicted RBP16.4■□□□□ 0.22
TREX1-201ENST00000433541 NUMBLQ9Y6R0 609 aa16.4■□□□□ 0.22
TREX1-201ENST00000433541 HELZP42694 1942 aaKnown RBP16.39■□□□□ 0.21
TREX1-201ENST00000433541 DLL1O00548 723 aa16.39■□□□□ 0.21
TREX1-201ENST00000433541 CYP26A1O43174 497 aa16.39■□□□□ 0.21
TREX1-201ENST00000433541 PNMA6AP0CW24 399 aaPredicted RBP16.39■□□□□ 0.21
TREX1-201ENST00000433541 PLCB2Q00722 1185 aa16.39■□□□□ 0.21
TREX1-201ENST00000433541 TAF10Q12962 218 aa16.39■□□□□ 0.21
TREX1-201ENST00000433541 TXNDC8Q6A555 127 aa16.39■□□□□ 0.21
TREX1-201ENST00000433541 PARM1Q6UWI2 310 aa16.39■□□□□ 0.21
TREX1-201ENST00000433541 CACNA2D4Q7Z3S7 1137 aa16.39■□□□□ 0.21
TREX1-201ENST00000433541 PDZD8Q8NEN9 1154 aa16.39■□□□□ 0.21
TREX1-201ENST00000433541 ZMIZ2Q8NF64 920 aa16.39■□□□□ 0.21
TREX1-201ENST00000433541 TFAP2BQ92481 460 aa16.39■□□□□ 0.21
TREX1-201ENST00000433541 SHC3Q92529 594 aa16.39■□□□□ 0.21
TREX1-201ENST00000433541 MYRFLQ96LU7 910 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms