RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 POF1BQ8WVV4 589 aa27.93■■■□□ 2.06
TMEM248-205ENST00000433271 AUTS2Q8WXX7 1259 aa27.93■■■□□ 2.06
TMEM248-205ENST00000433271 ZNF653Q96CK0 615 aa27.93■■■□□ 2.06
TMEM248-205ENST00000433271 PGLYRP2Q96PD5 576 aa27.93■■■□□ 2.06
TMEM248-205ENST00000433271 KCNK16Q96T55 309 aa27.93■■■□□ 2.06
TMEM248-205ENST00000433271 DMAP1Q9NPF5 467 aaPredicted RBP27.93■■■□□ 2.06
TMEM248-205ENST00000433271 TMEM30AQ9NV96 361 aa27.93■■■□□ 2.06
TMEM248-205ENST00000433271 STRIP2Q9ULQ0 834 aa27.93■■■□□ 2.06
TMEM248-205ENST00000433271 CHD9Q3L8U1 2897 aa27.93■■■□□ 2.06
TMEM248-205ENST00000433271 A0A0A6YYK5 440 aaPredicted RBP27.92■■■□□ 2.06
TMEM248-205ENST00000433271 MTMR11A4FU01 709 aa27.92■■■□□ 2.06
TMEM248-205ENST00000433271 CYP2F1P24903 491 aa27.92■■■□□ 2.06
TMEM248-205ENST00000433271 MAGEA11P43364 429 aa27.92■■■□□ 2.06
TMEM248-205ENST00000433271 RGS7P49802 495 aa27.92■■■□□ 2.06
TMEM248-205ENST00000433271 VSTM1Q6UX27 236 aa27.92■■■□□ 2.06
TMEM248-205ENST00000433271 ATAD1Q8NBU5 361 aa27.92■■■□□ 2.06
TMEM248-205ENST00000433271 ZMIZ2Q8NF64 920 aa27.92■■■□□ 2.06
TMEM248-205ENST00000433271 IPO4Q8TEX9 1081 aaKnown RBP27.92■■■□□ 2.06
TMEM248-205ENST00000433271 KCTD13Q8WZ19 329 aa27.92■■■□□ 2.06
TMEM248-205ENST00000433271 TCF25Q9BQ70 676 aa27.92■■■□□ 2.06
TMEM248-205ENST00000433271 NKX2-4Q9H2Z4 354 aa27.92■■■□□ 2.06
TMEM248-205ENST00000433271 PRO3102Q9H379 93 aa27.92■■■□□ 2.06
TMEM248-205ENST00000433271 AVENQ9NQS1 362 aaPredicted RBP27.92■■■□□ 2.06
TMEM248-205ENST00000433271 TLR9Q9NR96 1032 aa27.92■■■□□ 2.06
TMEM248-205ENST00000433271 CNOT8Q9UFF9 292 aaKnown RBP27.92■■■□□ 2.06
TMEM248-205ENST00000433271 IRAK3Q9Y616 596 aa27.92■■■□□ 2.06
TMEM248-205ENST00000433271 WDR27A2RRH5 827 aa27.92■■■□□ 2.06
TMEM248-205ENST00000433271 CXCL14O95715 111 aa27.92■■■□□ 2.06
TMEM248-205ENST00000433271 RRM1P23921 792 aa27.92■■■□□ 2.06
TMEM248-205ENST00000433271 ACADSBP45954 432 aa27.92■■■□□ 2.06
TMEM248-205ENST00000433271 ERVFC1P60507 584 aa27.92■■■□□ 2.06
TMEM248-205ENST00000433271 RAB33AQ14088 237 aa27.92■■■□□ 2.06
TMEM248-205ENST00000433271 TPGS2Q68CL5 300 aa27.92■■■□□ 2.06
TMEM248-205ENST00000433271 ZNF461Q8TAF7 563 aa27.92■■■□□ 2.06
TMEM248-205ENST00000433271 ARHGEF26Q96DR7 871 aa27.92■■■□□ 2.06
TMEM248-205ENST00000433271 GUCA1BQ9UMX6 200 aa27.92■■■□□ 2.06
TMEM248-205ENST00000433271 NCANO14594 1321 aa27.91■■■□□ 2.06
TMEM248-205ENST00000433271 PTPRDP23468 1912 aa27.91■■■□□ 2.06
TMEM248-205ENST00000433271 ABLIM3O94929 683 aa27.91■■■□□ 2.06
TMEM248-205ENST00000433271 ERBB2P04626 1255 aa27.91■■■□□ 2.06
TMEM248-205ENST00000433271 DNAJB1P25685 340 aa27.91■■■□□ 2.06
TMEM248-205ENST00000433271 NDUFV1P49821 464 aa27.91■■■□□ 2.06
TMEM248-205ENST00000433271 TCEAL1Q15170 157 aa27.91■■■□□ 2.06
TMEM248-205ENST00000433271 RFFLQ8WZ73 363 aa27.91■■■□□ 2.06
TMEM248-205ENST00000433271 PNPLA8Q9NP80 782 aa27.91■■■□□ 2.06
TMEM248-205ENST00000433271 ENTPD7Q9NQZ7 604 aa27.91■■■□□ 2.06
TMEM248-205ENST00000433271 WDR35Q9P2L0 1181 aa27.91■■■□□ 2.06
TMEM248-205ENST00000433271 MYO1AQ9UBC5 1043 aa27.91■■■□□ 2.06
TMEM248-205ENST00000433271 AFF4Q9UHB7 1163 aaKnown RBP27.91■■■□□ 2.06
TMEM248-205ENST00000433271 MYH10P35580 1976 aa27.9■■■□□ 2.06
TMEM248-205ENST00000433271 E5RJQ4 531 aa27.9■■■□□ 2.06
TMEM248-205ENST00000433271 H3BNC9 293 aa27.9■■■□□ 2.06
TMEM248-205ENST00000433271 TEX28O15482 410 aa27.9■■■□□ 2.06
TMEM248-205ENST00000433271 GABBR2O75899 941 aa27.9■■■□□ 2.06
TMEM248-205ENST00000433271 VNN2O95498 520 aa27.9■■■□□ 2.06
TMEM248-205ENST00000433271 GRIK1P39086 918 aa27.9■■■□□ 2.06
TMEM248-205ENST00000433271 GSCP56915 257 aaPredicted RBP27.9■■■□□ 2.06
TMEM248-205ENST00000433271 ZNF268Q14587 947 aaPredicted RBP27.9■■■□□ 2.06
TMEM248-205ENST00000433271 CYP4A22Q5TCH4 519 aa27.9■■■□□ 2.06
TMEM248-205ENST00000433271 PPP2R2DQ66LE6 453 aa27.9■■■□□ 2.06
TMEM248-205ENST00000433271 RHOT2Q8IXI1 618 aa27.9■■■□□ 2.06
TMEM248-205ENST00000433271 SLC28A3Q9HAS3 691 aa27.9■■■□□ 2.06
TMEM248-205ENST00000433271 TJP2Q9UDY2 1190 aa27.9■■■□□ 2.06
TMEM248-205ENST00000433271 SALL4Q9UJQ4 1053 aa27.9■■■□□ 2.06
TMEM248-205ENST00000433271 F8VP50 259 aa27.89■■■□□ 2.06
TMEM248-205ENST00000433271 GRM6O15303 877 aa27.89■■■□□ 2.06
TMEM248-205ENST00000433271 ATMINO43313 823 aaPredicted RBP27.89■■■□□ 2.06
TMEM248-205ENST00000433271 ADCY1Q08828 1119 aa27.89■■■□□ 2.06
TMEM248-205ENST00000433271 SMC1AQ14683 1233 aaKnown RBP27.89■■■□□ 2.06
TMEM248-205ENST00000433271 PLEKHA7Q6IQ23 1121 aa27.89■■■□□ 2.06
TMEM248-205ENST00000433271 CHRDL2Q6WN34 429 aa27.89■■■□□ 2.06
TMEM248-205ENST00000433271 XYLT1Q86Y38 959 aa27.89■■■□□ 2.06
TMEM248-205ENST00000433271 RNF10Q8N5U6 811 aaKnown RBP27.89■■■□□ 2.06
TMEM248-205ENST00000433271 MRPL43Q8N983 215 aaKnown RBP27.89■■■□□ 2.06
TMEM248-205ENST00000433271 SLC35G2Q8TBE7 412 aa27.89■■■□□ 2.06
TMEM248-205ENST00000433271 NGRNQ9NPE2 291 aaKnown RBP27.89■■■□□ 2.06
TMEM248-205ENST00000433271 PARVAQ9NVD7 372 aa27.89■■■□□ 2.06
TMEM248-205ENST00000433271 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.89■■■□□ 2.05
TMEM248-205ENST00000433271 MACROD2A1Z1Q3 448 aa27.89■■■□□ 2.05
TMEM248-205ENST00000433271 HHLA1C9JL84 531 aa27.89■■■□□ 2.05
TMEM248-205ENST00000433271 CNPP09543 421 aaKnown RBP27.89■■■□□ 2.05
TMEM248-205ENST00000433271 MLLT1Q03111 559 aaPredicted RBP27.89■■■□□ 2.05
TMEM248-205ENST00000433271 GPM6BQ13491 265 aa27.89■■■□□ 2.05
TMEM248-205ENST00000433271 C8orf48Q96LL4 319 aa27.89■■■□□ 2.05
TMEM248-205ENST00000433271 LRRC4Q9HBW1 653 aa27.89■■■□□ 2.05
TMEM248-205ENST00000433271 CTTNBP2NLQ9P2B4 639 aa27.89■■■□□ 2.05
TMEM248-205ENST00000433271 UVRAGQ9P2Y5 699 aa27.89■■■□□ 2.05
TMEM248-205ENST00000433271 HSFX1Q9UBD0 423 aa27.89■■■□□ 2.05
TMEM248-205ENST00000433271 MAFFQ9ULX9 164 aa27.89■■■□□ 2.05
TMEM248-205ENST00000433271 TRIM66O15016 1216 aa27.88■■■□□ 2.05
TMEM248-205ENST00000433271 HAPLN1P10915 354 aaPredicted RBP27.88■■■□□ 2.05
TMEM248-205ENST00000433271 ATF2P15336 505 aa27.88■■■□□ 2.05
TMEM248-205ENST00000433271 CA8P35219 290 aa27.88■■■□□ 2.05
TMEM248-205ENST00000433271 SMAD3P84022 425 aaKnown RBP27.88■■■□□ 2.05
TMEM248-205ENST00000433271 DUSP4Q13115 394 aa27.88■■■□□ 2.05
TMEM248-205ENST00000433271 MAMLD1Q13495 774 aa27.88■■■□□ 2.05
TMEM248-205ENST00000433271 RAB41Q5JT25 222 aa27.88■■■□□ 2.05
TMEM248-205ENST00000433271 PHLDB2Q86SQ0 1253 aa27.88■■■□□ 2.05
TMEM248-205ENST00000433271 ZDHHC17Q8IUH5 632 aa27.88■■■□□ 2.05
TMEM248-205ENST00000433271 C3orf20Q8ND61 904 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms