RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 PYGMP11217 842 aa8.46□□□□□ -1.05
VTI1A-202ENST00000432306 BCRP11274 1271 aa8.46□□□□□ -1.05
VTI1A-202ENST00000432306 GNAT1P11488 350 aa8.46□□□□□ -1.05
VTI1A-202ENST00000432306 GLULP15104 373 aa8.46□□□□□ -1.05
VTI1A-202ENST00000432306 CPEP16870 476 aa8.46□□□□□ -1.05
VTI1A-202ENST00000432306 COMTP21964 271 aa8.46□□□□□ -1.05
VTI1A-202ENST00000432306 MARK3P27448 753 aa8.46□□□□□ -1.05
VTI1A-202ENST00000432306 FOXN2P32314 431 aa8.46□□□□□ -1.05
VTI1A-202ENST00000432306 STT3AP46977 705 aa8.46□□□□□ -1.05
VTI1A-202ENST00000432306 CASP4P49662 377 aa8.46□□□□□ -1.05
VTI1A-202ENST00000432306 WDR4P57081 412 aaKnown RBP8.46□□□□□ -1.05
VTI1A-202ENST00000432306 CENPCQ03188 943 aa8.46□□□□□ -1.05
VTI1A-202ENST00000432306 PTP4A2Q12974 167 aa8.46□□□□□ -1.05
VTI1A-202ENST00000432306 PRKG2Q13237 762 aa8.46□□□□□ -1.05
VTI1A-202ENST00000432306 DYNC1I2Q13409 638 aaKnown RBP8.46□□□□□ -1.05
VTI1A-202ENST00000432306 DCAF17Q5H9S7 520 aaPredicted RBP8.46□□□□□ -1.05
VTI1A-202ENST00000432306 GJB7Q6PEY0 223 aa8.46□□□□□ -1.05
VTI1A-202ENST00000432306 C4orf50Q6ZRC1 276 aa8.46□□□□□ -1.05
VTI1A-202ENST00000432306 TRABD2AQ86V40 505 aa8.46□□□□□ -1.05
VTI1A-202ENST00000432306 FAM186BQ8IYM0 893 aa8.46□□□□□ -1.05
VTI1A-202ENST00000432306 ARHGAP18Q8N392 663 aa8.46□□□□□ -1.05
VTI1A-202ENST00000432306 COA7Q96BR5 231 aa8.46□□□□□ -1.05
VTI1A-202ENST00000432306 NUDCD1Q96RS6 583 aa8.46□□□□□ -1.05
VTI1A-202ENST00000432306 FIZ1Q96SL8 496 aa8.46□□□□□ -1.05
VTI1A-202ENST00000432306 PAIP2Q9BPZ3 127 aaKnown RBP8.46□□□□□ -1.05
VTI1A-202ENST00000432306 CCDC77Q9BR77 488 aa8.46□□□□□ -1.05
VTI1A-202ENST00000432306 STRA6Q9BX79 667 aa8.46□□□□□ -1.05
VTI1A-202ENST00000432306 PHACTR1Q9C0D0 580 aa8.46□□□□□ -1.05
VTI1A-202ENST00000432306 INTS2Q9H0H0 1204 aaKnown RBP8.46□□□□□ -1.05
VTI1A-202ENST00000432306 DCAF16Q9NXF7 216 aa8.46□□□□□ -1.05
VTI1A-202ENST00000432306 TAS2R14Q9NYV8 317 aa8.46□□□□□ -1.05
VTI1A-202ENST00000432306 NINJ2Q9NZG7 142 aa8.46□□□□□ -1.05
VTI1A-202ENST00000432306 RGL1Q9NZL6 768 aa8.46□□□□□ -1.05
VTI1A-202ENST00000432306 KCND2Q9NZV8 630 aa8.46□□□□□ -1.05
VTI1A-202ENST00000432306 PDP2Q9P2J9 529 aa8.46□□□□□ -1.05
VTI1A-202ENST00000432306 DNAJB4Q9UDY4 337 aa8.46□□□□□ -1.05
VTI1A-202ENST00000432306 PNMA8BQ9ULN7 279 aaPredicted RBP8.46□□□□□ -1.05
VTI1A-202ENST00000432306 ZMYND8Q9ULU4 1186 aaPredicted RBP8.46□□□□□ -1.05
VTI1A-202ENST00000432306 TRIM33Q9UPN9 1127 aa8.46□□□□□ -1.05
VTI1A-202ENST00000432306 MAPRE3Q9UPY8 281 aa8.46□□□□□ -1.05
VTI1A-202ENST00000432306 NAALADL1Q9UQQ1 740 aa8.46□□□□□ -1.05
VTI1A-202ENST00000432306 AFG3L2Q9Y4W6 797 aa8.46□□□□□ -1.05
VTI1A-202ENST00000432306 GAKO14976 1311 aa8.46□□□□□ -1.06
VTI1A-202ENST00000432306 MAGEA13PA6NCF6 341 aa8.46□□□□□ -1.06
VTI1A-202ENST00000432306 MANSC4A6NHS7 340 aaPredicted RBP8.46□□□□□ -1.06
VTI1A-202ENST00000432306 SMIM23A6NLE4 172 aa8.46□□□□□ -1.06
VTI1A-202ENST00000432306 SMAD7O15105 426 aaKnown RBP8.46□□□□□ -1.06
VTI1A-202ENST00000432306 SMIM24O75264 130 aa8.46□□□□□ -1.06
VTI1A-202ENST00000432306 UFL1O94874 794 aa8.46□□□□□ -1.06
VTI1A-202ENST00000432306 ABLIM3O94929 683 aa8.46□□□□□ -1.06
VTI1A-202ENST00000432306 ZWINTO95229 277 aa8.46□□□□□ -1.06
VTI1A-202ENST00000432306 GH1P01241 217 aa8.46□□□□□ -1.06
VTI1A-202ENST00000432306 PIM1P11309 404 aaPredicted RBP8.46□□□□□ -1.06
VTI1A-202ENST00000432306 ABCB4P21439 1286 aa8.46□□□□□ -1.06
VTI1A-202ENST00000432306 PSMC4P43686 418 aa8.46□□□□□ -1.06
VTI1A-202ENST00000432306 CD151P48509 253 aa8.46□□□□□ -1.06
VTI1A-202ENST00000432306 MARCKSL1P49006 195 aa8.46□□□□□ -1.06
VTI1A-202ENST00000432306 GJA9P57773 515 aa8.46□□□□□ -1.06
VTI1A-202ENST00000432306 SLC9A5Q14940 896 aa8.46□□□□□ -1.06
VTI1A-202ENST00000432306 TCERG1LQ5VWI1 586 aa8.46□□□□□ -1.06
VTI1A-202ENST00000432306 ZNF804AQ7Z570 1209 aa8.46□□□□□ -1.06
VTI1A-202ENST00000432306 VSIG1Q86XK7 387 aa8.46□□□□□ -1.06
VTI1A-202ENST00000432306 PALB2Q86YC2 1186 aa8.46□□□□□ -1.06
VTI1A-202ENST00000432306 C12orf56Q8IXR9 622 aa8.46□□□□□ -1.06
VTI1A-202ENST00000432306 SAMD14Q8IZD0 417 aaPredicted RBP8.46□□□□□ -1.06
VTI1A-202ENST00000432306 KIFAP3Q92845 792 aa8.46□□□□□ -1.06
VTI1A-202ENST00000432306 LENG9Q96B70 501 aa8.46□□□□□ -1.06
VTI1A-202ENST00000432306 NR1H4Q96RI1 486 aaPredicted RBP8.46□□□□□ -1.06
VTI1A-202ENST00000432306 CENPOQ9BU64 300 aa8.46□□□□□ -1.06
VTI1A-202ENST00000432306 DDX23Q9BUQ8 820 aaKnown RBP8.46□□□□□ -1.06
VTI1A-202ENST00000432306 DENND2DQ9H6A0 471 aaPredicted RBP8.46□□□□□ -1.06
VTI1A-202ENST00000432306 SMYD2Q9NRG4 433 aa8.46□□□□□ -1.06
VTI1A-202ENST00000432306 GGA1Q9UJY5 639 aa8.46□□□□□ -1.06
VTI1A-202ENST00000432306 RABL2BQ9UNT1 228 aa8.46□□□□□ -1.06
VTI1A-202ENST00000432306 PTPN22Q9Y2R2 807 aa8.46□□□□□ -1.06
VTI1A-202ENST00000432306 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.46□□□□□ -1.06
VTI1A-202ENST00000432306 EML1O00423 815 aa8.45□□□□□ -1.06
VTI1A-202ENST00000432306 DLL1O00548 723 aa8.45□□□□□ -1.06
VTI1A-202ENST00000432306 NVLO15381 856 aaKnown RBP8.45□□□□□ -1.06
VTI1A-202ENST00000432306 RNF8O76064 485 aa8.45□□□□□ -1.06
VTI1A-202ENST00000432306 CNOT4O95628 575 aaKnown RBP8.45□□□□□ -1.06
VTI1A-202ENST00000432306 GAS8O95995 478 aa8.45□□□□□ -1.06
VTI1A-202ENST00000432306 CETPP11597 493 aa8.45□□□□□ -1.06
VTI1A-202ENST00000432306 CDC25CP30307 473 aa8.45□□□□□ -1.06
VTI1A-202ENST00000432306 PCK1P35558 622 aa8.45□□□□□ -1.06
VTI1A-202ENST00000432306 TUBP50607 506 aa8.45□□□□□ -1.06
VTI1A-202ENST00000432306 MXRA7P84157 204 aa8.45□□□□□ -1.06
VTI1A-202ENST00000432306 PPARDQ03181 441 aa8.45□□□□□ -1.06
VTI1A-202ENST00000432306 KRT17Q04695 432 aa8.45□□□□□ -1.06
VTI1A-202ENST00000432306 SPARCL1Q14515 664 aa8.45□□□□□ -1.06
VTI1A-202ENST00000432306 KPNB1Q14974 876 aaKnown RBP8.45□□□□□ -1.06
VTI1A-202ENST00000432306 CLEC16AQ2KHT3 1053 aa8.45□□□□□ -1.06
VTI1A-202ENST00000432306 CBWD6Q4V339 395 aa8.45□□□□□ -1.06
VTI1A-202ENST00000432306 CBWD3Q5JTY5 395 aa8.45□□□□□ -1.06
VTI1A-202ENST00000432306 CBWD5Q5RIA9 395 aa8.45□□□□□ -1.06
VTI1A-202ENST00000432306 SPRYD7Q5W111 196 aa8.45□□□□□ -1.06
VTI1A-202ENST00000432306 ZNF449Q6P9G9 518 aa8.45□□□□□ -1.06
VTI1A-202ENST00000432306 RNF207Q6ZRF8 634 aa8.45□□□□□ -1.06
VTI1A-202ENST00000432306 CYP4X1Q8N118 509 aa8.45□□□□□ -1.06
VTI1A-202ENST00000432306 ARL10Q8N8L6 244 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms