RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 GRIN2DO15399 1336 aa11.94□□□□□ -0.5
CLDN4-202ENST00000431918 GRIN3BO60391 1043 aa11.94□□□□□ -0.5
CLDN4-202ENST00000431918 SHOX2O60902 331 aaPredicted RBP11.94□□□□□ -0.5
CLDN4-202ENST00000431918 SSTR1P30872 391 aa11.94□□□□□ -0.5
CLDN4-202ENST00000431918 MBTD1Q05BQ5 628 aa11.94□□□□□ -0.5
CLDN4-202ENST00000431918 ACTN3Q08043 901 aaPredicted RBP11.94□□□□□ -0.5
CLDN4-202ENST00000431918 DSTYKQ6XUX3 929 aa11.94□□□□□ -0.5
CLDN4-202ENST00000431918 TSHZ1Q6ZSZ6 1077 aa11.94□□□□□ -0.5
CLDN4-202ENST00000431918 USP50Q70EL3 339 aaPredicted RBP11.94□□□□□ -0.5
CLDN4-202ENST00000431918 FAM172AQ8WUF8 416 aa11.94□□□□□ -0.5
CLDN4-202ENST00000431918 CD101Q93033 1021 aa11.94□□□□□ -0.5
CLDN4-202ENST00000431918 TTC17Q96AE7 1141 aa11.94□□□□□ -0.5
CLDN4-202ENST00000431918 TTC25Q96NG3 672 aa11.94□□□□□ -0.5
CLDN4-202ENST00000431918 FAM129AQ9BZQ8 928 aa11.94□□□□□ -0.5
CLDN4-202ENST00000431918 GBA2Q9HCG7 927 aaPredicted RBP11.94□□□□□ -0.5
CLDN4-202ENST00000431918 BARX2Q9UMQ3 279 aaPredicted RBP11.94□□□□□ -0.5
CLDN4-202ENST00000431918 BTBD19C9JJ37 291 aa11.93□□□□□ -0.5
CLDN4-202ENST00000431918 TRAPPC3O43617 180 aa11.93□□□□□ -0.5
CLDN4-202ENST00000431918 LIASO43766 372 aa11.93□□□□□ -0.5
CLDN4-202ENST00000431918 RPS6KA5O75582 802 aa11.93□□□□□ -0.5
CLDN4-202ENST00000431918 POU5F1Q01860 360 aaKnown RBP11.93□□□□□ -0.5
CLDN4-202ENST00000431918 ACVR2BQ13705 512 aa11.93□□□□□ -0.5
CLDN4-202ENST00000431918 FYB2Q5VWT5 728 aa11.93□□□□□ -0.5
CLDN4-202ENST00000431918 NOTUMQ6P988 496 aa11.93□□□□□ -0.5
CLDN4-202ENST00000431918 ATP11CQ8NB49 1132 aa11.93□□□□□ -0.5
CLDN4-202ENST00000431918 ARMC2Q8NEN0 867 aa11.93□□□□□ -0.5
CLDN4-202ENST00000431918 SERPINB12Q96P63 405 aa11.93□□□□□ -0.5
CLDN4-202ENST00000431918 TWNKQ96RR1 684 aa11.93□□□□□ -0.5
CLDN4-202ENST00000431918 ELOVL4Q9GZR5 314 aa11.93□□□□□ -0.5
CLDN4-202ENST00000431918 ATP8B3O60423 1300 aa11.93□□□□□ -0.5
CLDN4-202ENST00000431918 PIGRP01833 764 aa11.93□□□□□ -0.5
CLDN4-202ENST00000431918 CD48P09326 243 aa11.93□□□□□ -0.5
CLDN4-202ENST00000431918 ACAT1P24752 427 aaKnown RBP11.93□□□□□ -0.5
CLDN4-202ENST00000431918 TAF5Q15542 800 aa11.93□□□□□ -0.5
CLDN4-202ENST00000431918 C15orf39Q6ZRI6 1047 aa11.93□□□□□ -0.5
CLDN4-202ENST00000431918 GLIS1Q8NBF1 620 aa11.93□□□□□ -0.5
CLDN4-202ENST00000431918 TBC1D31Q96DN5 1066 aa11.93□□□□□ -0.5
CLDN4-202ENST00000431918 PGM2Q96G03 612 aa11.93□□□□□ -0.5
CLDN4-202ENST00000431918 SPC25Q9HBM1 224 aa11.93□□□□□ -0.5
CLDN4-202ENST00000431918 CD248Q9HCU0 757 aa11.93□□□□□ -0.5
CLDN4-202ENST00000431918 VTA1Q9NP79 307 aa11.93□□□□□ -0.5
CLDN4-202ENST00000431918 QSER1Q2KHR3 1735 aa11.93□□□□□ -0.5
CLDN4-202ENST00000431918 DNALI1O14645 258 aaPredicted RBP11.93□□□□□ -0.5
CLDN4-202ENST00000431918 TNPO2O14787 897 aaKnown RBP11.93□□□□□ -0.5
CLDN4-202ENST00000431918 APOL1O14791 398 aa11.93□□□□□ -0.5
CLDN4-202ENST00000431918 STK10O94804 968 aaKnown RBP11.93□□□□□ -0.5
CLDN4-202ENST00000431918 ERBB2P04626 1255 aa11.93□□□□□ -0.5
CLDN4-202ENST00000431918 NUDT17P0C025 328 aa11.93□□□□□ -0.5
CLDN4-202ENST00000431918 GNL1P36915 607 aaPredicted RBP11.93□□□□□ -0.5
CLDN4-202ENST00000431918 DNAJC3Q13217 504 aa11.93□□□□□ -0.5
CLDN4-202ENST00000431918 SPARCL1Q14515 664 aa11.93□□□□□ -0.5
CLDN4-202ENST00000431918 E2F5Q15329 346 aa11.93□□□□□ -0.5
CLDN4-202ENST00000431918 PAN2Q504Q3 1202 aaKnown RBP11.93□□□□□ -0.5
CLDN4-202ENST00000431918 MTHFD1LQ6UB35 978 aa11.93□□□□□ -0.5
CLDN4-202ENST00000431918 PAF1Q8N7H5 531 aa11.93□□□□□ -0.5
CLDN4-202ENST00000431918 FBF1Q8TES7 1133 aa11.93□□□□□ -0.5
CLDN4-202ENST00000431918 ASB7Q9H672 318 aa11.93□□□□□ -0.5
CLDN4-202ENST00000431918 DCTN4Q9UJW0 460 aa11.93□□□□□ -0.5
CLDN4-202ENST00000431918 STYXL1Q9Y6J8 313 aa11.93□□□□□ -0.5
CLDN4-202ENST00000431918 CCDC189A1A4V9 331 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 NDC80O14777 642 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 B4GALT4O60513 344 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 ZNF157P51786 506 aaPredicted RBP11.92□□□□□ -0.5
CLDN4-202ENST00000431918 OGDHQ02218 1023 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 ZNF449Q6P9G9 518 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 PCGF5Q86SE9 256 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 NETO2Q8NC67 525 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 C18orf25Q96B23 403 aaPredicted RBP11.92□□□□□ -0.5
CLDN4-202ENST00000431918 KLHL29Q96CT2 875 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 RSAD1Q9HA92 442 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 SIGLEC16A6NMB1 481 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 H0YGN5 161 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 RECQL4O94761 1208 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 RAD23BP54727 409 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 NRLP54845 237 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 GPR142Q7Z601 462 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 EXOC3L1Q86VI1 746 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 APPL2Q8NEU8 664 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 KLC2Q9H0B6 622 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 FZD8Q9H461 694 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 NFS1Q9Y697 457 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 C22orf31O95567 290 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 KDELR1P24390 212 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 FASTKD3Q14CZ7 662 aaKnown RBP11.92□□□□□ -0.5
CLDN4-202ENST00000431918 SLC10A6Q3KNW5 377 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 DCAF6Q58WW2 860 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 FAM131BQ86XD5 332 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 HACE1Q8IYU2 909 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 KIRREL3Q8IZU9 778 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 FBXO36Q8NEA4 188 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 RSRC1Q96IZ7 334 aaKnown RBP11.92□□□□□ -0.5
CLDN4-202ENST00000431918 TINF2Q9BSI4 451 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 CNPY3Q9BT09 278 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 B3GNT5Q9BYG0 378 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 ABHD16BQ9H3Z7 469 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 PDZD7Q9H5P4 517 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 HAUS2Q9NVX0 235 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 TIMM13Q9Y5L4 95 aaPredicted RBP11.92□□□□□ -0.5
CLDN4-202ENST00000431918 KAT6AQ92794 2004 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 hCG_1818297A0A087WSY0 165 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms