RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 ZNF268Q14587 947 aaPredicted RBP19.23■□□□□ 0.67
HMGN1-206ENST00000431390 VARS2Q5ST30 1063 aaKnown RBP19.23■□□□□ 0.67
HMGN1-206ENST00000431390 SPOUT1Q5T280 376 aaKnown RBP19.23■□□□□ 0.67
HMGN1-206ENST00000431390 C11orf63Q6NUN7 778 aa19.23■□□□□ 0.67
HMGN1-206ENST00000431390 KCNT2Q6UVM3 1135 aa19.23■□□□□ 0.67
HMGN1-206ENST00000431390 OR10T2Q8NGX3 314 aa19.23■□□□□ 0.67
HMGN1-206ENST00000431390 PCED1BQ96HM7 432 aa19.23■□□□□ 0.67
HMGN1-206ENST00000431390 ZNF558Q96NG5 402 aa19.23■□□□□ 0.67
HMGN1-206ENST00000431390 YME1L1Q96TA2 773 aa19.23■□□□□ 0.67
HMGN1-206ENST00000431390 SLC4A5Q9BY07 1137 aa19.23■□□□□ 0.67
HMGN1-206ENST00000431390 B3GNT5Q9BYG0 378 aa19.23■□□□□ 0.67
HMGN1-206ENST00000431390 SYNCQ9H7C4 482 aa19.23■□□□□ 0.67
HMGN1-206ENST00000431390 NLRC5Q86WI3 1866 aa19.23■□□□□ 0.67
HMGN1-206ENST00000431390 PTPRDP23468 1912 aa19.23■□□□□ 0.67
HMGN1-206ENST00000431390 KIAA1671Q9BY89 1806 aa19.23■□□□□ 0.67
HMGN1-206ENST00000431390 XPO1O14980 1071 aaKnown RBP19.23■□□□□ 0.67
HMGN1-206ENST00000431390 BUB1BO60566 1050 aaPredicted RBP19.23■□□□□ 0.67
HMGN1-206ENST00000431390 NPR3P17342 541 aa19.23■□□□□ 0.67
HMGN1-206ENST00000431390 PBX3P40426 434 aa19.23■□□□□ 0.67
HMGN1-206ENST00000431390 PLA2G4AP47712 749 aa19.23■□□□□ 0.67
HMGN1-206ENST00000431390 ZNF280DQ6N043 979 aa19.23■□□□□ 0.67
HMGN1-206ENST00000431390 DNAJC24Q6P3W2 148 aa19.23■□□□□ 0.67
HMGN1-206ENST00000431390 DAAM2Q86T65 1068 aa19.23■□□□□ 0.67
HMGN1-206ENST00000431390 TMEM110Q86TL2 294 aa19.23■□□□□ 0.67
HMGN1-206ENST00000431390 FAM35AQ86V20 835 aa19.23■□□□□ 0.67
HMGN1-206ENST00000431390 TMEM173Q86WV6 379 aaPredicted RBP19.23■□□□□ 0.67
HMGN1-206ENST00000431390 PHOSPHO2Q8TCD6 241 aa19.23■□□□□ 0.67
HMGN1-206ENST00000431390 BCL7CQ8WUZ0 217 aaPredicted RBP19.23■□□□□ 0.67
HMGN1-206ENST00000431390 IGSF21Q96ID5 467 aa19.23■□□□□ 0.67
HMGN1-206ENST00000431390 HSFY1Q96LI6 401 aa19.23■□□□□ 0.67
HMGN1-206ENST00000431390 SLC9A7Q96T83 725 aa19.23■□□□□ 0.67
HMGN1-206ENST00000431390 MED10Q9BTT4 135 aa19.23■□□□□ 0.67
HMGN1-206ENST00000431390 OXCT2Q9BYC2 517 aaPredicted RBP19.23■□□□□ 0.67
HMGN1-206ENST00000431390 CHORDC1Q9UHD1 332 aaPredicted RBP19.23■□□□□ 0.67
HMGN1-206ENST00000431390 LCMT1Q9UIC8 334 aa19.23■□□□□ 0.67
HMGN1-206ENST00000431390 MTCH2Q9Y6C9 303 aa19.23■□□□□ 0.67
HMGN1-206ENST00000431390 EPOPA6NHQ4 379 aa19.22■□□□□ 0.67
HMGN1-206ENST00000431390 ERBB2P04626 1255 aa19.22■□□□□ 0.67
HMGN1-206ENST00000431390 FAM200BP0CF97 657 aa19.22■□□□□ 0.67
HMGN1-206ENST00000431390 PLA2G5P39877 138 aa19.22■□□□□ 0.67
HMGN1-206ENST00000431390 ACADSBP45954 432 aa19.22■□□□□ 0.67
HMGN1-206ENST00000431390 CCDC142Q17RM4 750 aa19.22■□□□□ 0.67
HMGN1-206ENST00000431390 CYP4A22Q5TCH4 519 aa19.22■□□□□ 0.67
HMGN1-206ENST00000431390 PAPD7Q5XG87 772 aaKnown RBP19.22■□□□□ 0.67
HMGN1-206ENST00000431390 PMF1Q6P1K2 205 aa19.22■□□□□ 0.67
HMGN1-206ENST00000431390 XYLT1Q86Y38 959 aa19.22■□□□□ 0.67
HMGN1-206ENST00000431390 RNF168Q8IYW5 571 aaPredicted RBP19.22■□□□□ 0.67
HMGN1-206ENST00000431390 DCP1BQ8IZD4 617 aaKnown RBP19.22■□□□□ 0.67
HMGN1-206ENST00000431390 MYLPFQ96A32 169 aa19.22■□□□□ 0.67
HMGN1-206ENST00000431390 SMARCD1Q96GM5 515 aa19.22■□□□□ 0.67
HMGN1-206ENST00000431390 ZCWPW1Q9H0M4 648 aa19.22■□□□□ 0.67
HMGN1-206ENST00000431390 ABCB6Q9NP58 842 aa19.22■□□□□ 0.67
HMGN1-206ENST00000431390 ST7Q9NRC1 585 aa19.22■□□□□ 0.67
HMGN1-206ENST00000431390 MRPL42Q9Y6G3 142 aaKnown RBP19.22■□□□□ 0.67
HMGN1-206ENST00000431390 TRANK1O15050 2925 aa19.21■□□□□ 0.67
HMGN1-206ENST00000431390 OR6C75A6NL08 312 aa19.21■□□□□ 0.67
HMGN1-206ENST00000431390 H7C4K7 107 aa19.21■□□□□ 0.67
HMGN1-206ENST00000431390 TULP2O00295 520 aa19.21■□□□□ 0.67
HMGN1-206ENST00000431390 CLDN5O00501 218 aa19.21■□□□□ 0.67
HMGN1-206ENST00000431390 ARHGEF15O94989 841 aa19.21■□□□□ 0.67
HMGN1-206ENST00000431390 ATP1A1P05023 1023 aaKnown RBP19.21■□□□□ 0.67
HMGN1-206ENST00000431390 TUBB2AQ13885 445 aa19.21■□□□□ 0.67
HMGN1-206ENST00000431390 AAK1Q2M2I8 961 aa19.21■□□□□ 0.67
HMGN1-206ENST00000431390 PPP1R15BQ5SWA1 713 aa19.21■□□□□ 0.67
HMGN1-206ENST00000431390 MEI1Q5TIA1 1274 aa19.21■□□□□ 0.67
HMGN1-206ENST00000431390 LLGL2Q6P1M3 1020 aa19.21■□□□□ 0.67
HMGN1-206ENST00000431390 ANKS3Q6ZW76 656 aa19.21■□□□□ 0.67
HMGN1-206ENST00000431390 CEP57Q86XR8 500 aa19.21■□□□□ 0.67
HMGN1-206ENST00000431390 ZDHHC17Q8IUH5 632 aa19.21■□□□□ 0.67
HMGN1-206ENST00000431390 SLC39A11Q8N1S5 342 aa19.21■□□□□ 0.67
HMGN1-206ENST00000431390 COLGALT1Q8NBJ5 622 aa19.21■□□□□ 0.67
HMGN1-206ENST00000431390 FEZF2Q8TBJ5 459 aa19.21■□□□□ 0.67
HMGN1-206ENST00000431390 MCRS1Q96EZ8 462 aa19.21■□□□□ 0.67
HMGN1-206ENST00000431390 TTPALQ9BTX7 342 aa19.21■□□□□ 0.67
HMGN1-206ENST00000431390 TUBB2BQ9BVA1 445 aa19.21■□□□□ 0.67
HMGN1-206ENST00000431390 KRT82Q9NSB4 513 aa19.21■□□□□ 0.67
HMGN1-206ENST00000431390 TJP2Q9UDY2 1190 aa19.21■□□□□ 0.67
HMGN1-206ENST00000431390 ANAPC7Q9UJX3 599 aa19.21■□□□□ 0.67
HMGN1-206ENST00000431390 INSL6Q9Y581 213 aa19.21■□□□□ 0.67
HMGN1-206ENST00000431390 E5RJQ4 531 aa19.2■□□□□ 0.66
HMGN1-206ENST00000431390 ENC1O14682 589 aa19.2■□□□□ 0.66
HMGN1-206ENST00000431390 CTXN3Q4LDR2 81 aa19.2■□□□□ 0.66
HMGN1-206ENST00000431390 C4orf50Q6ZRC1 276 aa19.2■□□□□ 0.66
HMGN1-206ENST00000431390 CLEC20AQ6ZU45 233 aa19.2■□□□□ 0.66
HMGN1-206ENST00000431390 PHLDB2Q86SQ0 1253 aa19.2■□□□□ 0.66
HMGN1-206ENST00000431390 LRRTM3Q86VH5 581 aa19.2■□□□□ 0.66
HMGN1-206ENST00000431390 KCTD13Q8WZ19 329 aa19.2■□□□□ 0.66
HMGN1-206ENST00000431390 TMEM209Q96SK2 561 aa19.2■□□□□ 0.66
HMGN1-206ENST00000431390 SELENOOQ9BVL4 669 aa19.2■□□□□ 0.66
HMGN1-206ENST00000431390 UBXN6Q9BZV1 441 aa19.2■□□□□ 0.66
HMGN1-206ENST00000431390 CSNK1G1Q9HCP0 422 aa19.2■□□□□ 0.66
HMGN1-206ENST00000431390 AAASQ9NRG9 546 aa19.2■□□□□ 0.66
HMGN1-206ENST00000431390 SIGLEC16A6NMB1 481 aa19.19■□□□□ 0.66
HMGN1-206ENST00000431390 MYO1FO00160 1098 aa19.19■□□□□ 0.66
HMGN1-206ENST00000431390 AP1G2O75843 785 aa19.19■□□□□ 0.66
HMGN1-206ENST00000431390 URI1O94763 535 aaPredicted RBP19.19■□□□□ 0.66
HMGN1-206ENST00000431390 FTCDO95954 541 aa19.19■□□□□ 0.66
HMGN1-206ENST00000431390 PRLRP16471 622 aa19.19■□□□□ 0.66
HMGN1-206ENST00000431390 POU3F3P20264 500 aaPredicted RBP19.19■□□□□ 0.66
HMGN1-206ENST00000431390 RGS7P49802 495 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms