RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 GMCL1Q96IK5 515 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 CEP19Q96LK0 163 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 TRIM54Q9BYV2 358 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 KAT14Q9H8E8 782 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 PAQR5Q9NXK6 330 aaPredicted RBP5.58□□□□□ -1.52
PTPN4-203ENST00000430976 ZNF219Q9P2Y4 722 aaPredicted RBP5.58□□□□□ -1.52
PTPN4-203ENST00000430976 POMT1Q9Y6A1 747 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.58□□□□□ -1.52
PTPN4-203ENST00000430976 TTLL8A6PVC2 850 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 BTN3A1O00481 513 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 ECE2O60344 883 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 KLHL18O94889 574 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 PGM3O95394 542 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 RAB3DO95716 219 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 AFPP02771 609 aaKnown RBP5.58□□□□□ -1.52
PTPN4-203ENST00000430976 INHBAP08476 426 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 ACADMP11310 421 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 ODC1P11926 461 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 PRKCAP17252 672 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 KCNA3P22001 575 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 CDC34P49427 236 aaPredicted RBP5.58□□□□□ -1.52
PTPN4-203ENST00000430976 GFPT1Q06210 699 aaPredicted RBP5.58□□□□□ -1.52
PTPN4-203ENST00000430976 ZNF177Q13360 481 aaPredicted RBP5.58□□□□□ -1.52
PTPN4-203ENST00000430976 HERC3Q15034 1050 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 XKR9Q5GH70 373 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 RETSATQ6NUM9 610 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 SPATC1Q76KD6 591 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 RHOUQ7L0Q8 258 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 ZNF551Q7Z340 670 aaPredicted RBP5.58□□□□□ -1.52
PTPN4-203ENST00000430976 CUZD1Q86UP6 607 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 RNF135Q8IUD6 432 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 SLC41A1Q8IVJ1 513 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 GPR161Q8N6U8 529 aaKnown RBP5.58□□□□□ -1.52
PTPN4-203ENST00000430976 FBXO15Q8NCQ5 510 aaPredicted RBP5.58□□□□□ -1.52
PTPN4-203ENST00000430976 ACSBG1Q96GR2 724 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 EXOC2Q96KP1 924 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 CEP170P1Q96L14 293 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 FUT8Q9BYC5 575 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 NCOR1P1Q9H4R4 102 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 PNO1Q9NRX1 252 aaKnown RBP5.58□□□□□ -1.52
PTPN4-203ENST00000430976 C20orf96Q9NUD7 363 aaPredicted RBP5.58□□□□□ -1.52
PTPN4-203ENST00000430976 ETNK2Q9NVF9 386 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 KIF17Q9P2E2 1029 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 DAPK2Q9UIK4 370 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 SNX7Q9UNH6 387 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 PLEKHH1Q9ULM0 1364 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 A0A0U1RQJ8 604 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.58□□□□□ -1.52
PTPN4-203ENST00000430976 hCG_1809904A0A1W2PP81 198 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 A0A1W2PPE2 198 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 A0A1W2PR64 198 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 hCG_1807616A0A1W2PRN6 198 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 RHPN2P1A8MT19 583 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 A8MXQ7 604 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 GTPBP1O00178 669 aaKnown RBP5.58□□□□□ -1.52
PTPN4-203ENST00000430976 NDUFS6O75380 124 aaKnown RBP5.58□□□□□ -1.52
PTPN4-203ENST00000430976 CDC123O75794 336 aaPredicted RBP5.58□□□□□ -1.52
PTPN4-203ENST00000430976 BCAS2O75934 225 aaPredicted RBP5.58□□□□□ -1.52
PTPN4-203ENST00000430976 MAGP20916 626 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 KCNJ10P78508 379 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 NRG1Q02297 640 aaPredicted RBP5.58□□□□□ -1.52
PTPN4-203ENST00000430976 OCA2Q04671 838 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 PCDH1Q08174 1060 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 CLCA4Q14CN2 919 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 KARSQ15046 597 aaKnown RBP5.58□□□□□ -1.52
PTPN4-203ENST00000430976 AMHR2Q16671 573 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 ADCK5Q3MIX3 580 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 UGT3A2Q3SY77 523 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 TBRG1Q3YBR2 411 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 INTS11Q5TA45 600 aaKnown RBP5.58□□□□□ -1.52
PTPN4-203ENST00000430976 WDR93Q6P2C0 686 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 CLEC17AQ6ZS10 378 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 TMC3Q7Z5M5 1100 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 TPRA1Q86W33 373 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 ZNF227Q86WZ6 799 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 APLFQ8IW19 511 aaPredicted RBP5.58□□□□□ -1.52
PTPN4-203ENST00000430976 NXPE3Q969Y0 559 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 TM9SF2Q99805 663 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 C1orf21Q9H246 121 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 TFB2MQ9H5Q4 396 aaKnown RBP5.58□□□□□ -1.52
PTPN4-203ENST00000430976 CCDC86Q9H6F5 360 aaKnown RBP5.58□□□□□ -1.52
PTPN4-203ENST00000430976 ANLNQ9NQW6 1124 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 IL20Q9NYY1 176 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 MBD2Q9UBB5 411 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 APOBEC2Q9Y235 224 aaKnown RBP5.58□□□□□ -1.52
PTPN4-203ENST00000430976 HBS1LQ9Y450 684 aaKnown RBP5.58□□□□□ -1.52
PTPN4-203ENST00000430976 PCDHB12Q9Y5F1 795 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 ELP1O95163 1332 aa5.57□□□□□ -1.52
PTPN4-203ENST00000430976 PLOD2O00469 737 aa5.57□□□□□ -1.52
PTPN4-203ENST00000430976 PPEF1O14829 653 aaPredicted RBP5.57□□□□□ -1.52
PTPN4-203ENST00000430976 LDLRAD4O15165 306 aa5.57□□□□□ -1.52
PTPN4-203ENST00000430976 KCNN4O15554 427 aa5.57□□□□□ -1.52
PTPN4-203ENST00000430976 OAZ2O95190 189 aa5.57□□□□□ -1.52
PTPN4-203ENST00000430976 CNOT4O95628 575 aaKnown RBP5.57□□□□□ -1.52
PTPN4-203ENST00000430976 ZBED1O96006 694 aa5.57□□□□□ -1.52
PTPN4-203ENST00000430976 ZNF135P52742 658 aaPredicted RBP5.57□□□□□ -1.52
PTPN4-203ENST00000430976 MFAP3P55082 362 aa5.57□□□□□ -1.52
PTPN4-203ENST00000430976 MLLT6P55198 1093 aaPredicted RBP5.57□□□□□ -1.52
PTPN4-203ENST00000430976 GCNT1Q02742 428 aa5.57□□□□□ -1.52
PTPN4-203ENST00000430976 DHX9Q08211 1270 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms