RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 SPATA31A6Q5VVP1 1343 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 A0A0B4J269 797 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 PROM1O43490 865 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 FRS3O43559 492 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 ORC4O43929 436 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 PEX1O43933 1283 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 KIF20AO95235 890 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 HDCP19113 662 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 GRK6P43250 576 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 HSPA7P48741 367 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 NDUFV1P49821 464 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 MAPK10P53779 464 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 HTRA4P83105 476 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 MC2RQ01718 297 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 SATB1Q01826 763 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 ITIH3Q06033 890 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 TUBB3Q13509 450 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 MPEG1Q2M385 716 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 SLC35G1Q2M3R5 365 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 NBPF8Q3BBV2 869 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 CCDC70Q6NSX1 233 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 FBXO42Q6P3S6 717 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 GGT6Q6P531 493 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 Q6ZNX1 250 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 DPP9Q86TI2 863 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 SLC44A3Q8N4M1 653 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 CCDC33Q8N5R6 958 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 BEND2Q8NDZ0 799 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 NSUN7Q8NE18 718 aaKnown RBP3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 MAML1Q92585 1016 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 SUCLG2Q96I99 432 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 PGBD1Q96JS3 809 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 MRGPRX1Q96LB2 322 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 OSBPL9Q96SU4 736 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 AIFM2Q9BRQ8 373 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 TTLL2Q9BWV7 592 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 BRIP1Q9BX63 1249 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 RRN3Q9NYV6 651 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 VSX1Q9NZR4 365 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 HESX1Q9UBX0 185 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 TPCN1Q9ULQ1 816 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 AGAP1Q9UPQ3 857 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 INSL6Q9Y581 213 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 RAD54BQ9Y620 910 aa3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 EPN1Q9Y6I3 576 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P9-201ENST00000429856 CCDC151A5D8V7 595 aa3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 PRSS47A8MTI9 375 aa3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 F5H697 171 aa3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 MYO1CO00159 1063 aa3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 IKBKBO14920 756 aa3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 DNAJB5O75953 348 aa3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 UNC5CO95185 931 aa3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 GRPP07492 148 aa3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 ATXN1LP0C7T5 689 aaKnown RBP3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 CYP2C9P11712 490 aa3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 XRCC6P12956 609 aaKnown RBP eCLIP3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 SLC7A1P30825 629 aa3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 FOLR3P41439 243 aa3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 VIPR2P41587 438 aa3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 GCLCP48506 637 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 CLK3P49761 638 aaKnown RBP3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 ELLP55199 621 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 WNT3P56703 355 aa3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 LOXL3P58215 753 aa3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 NXPH1P58417 271 aa3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 MRPS35P82673 323 aaKnown RBP3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 FMO1Q01740 532 aa3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 SF3B3Q15393 1217 aaKnown RBP3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 PUM3Q15397 648 aaKnown RBP3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 MAPRE1Q15691 268 aaKnown RBP3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 CD300EQ496F6 205 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 CCDC38Q502W7 563 aa3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 SLC44A4Q53GD3 710 aa3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 C3orf38Q5JPI3 329 aa3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 SFRP4Q6FHJ7 346 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 TAF2Q6P1X5 1199 aa3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 VWA1Q6PCB0 445 aa3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 LAYNQ6UX15 382 aa3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 SLC30A10Q6XR72 485 aa3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 ZNF783Q6ZMS7 281 aa3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 MMS22LQ6ZRQ5 1243 aa3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 TEX19Q8NA77 164 aa3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 PCSK9Q8NBP7 692 aaKnown RBP3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 B3GALNT2Q8NCR0 500 aa3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 FAM46DQ8NEK8 389 aa3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 OR6B3Q8NGW1 331 aa3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 CCT6BQ92526 530 aa3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 TBC1D20Q96BZ9 403 aa3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 LRIG1Q96JA1 1093 aa3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 NELL2Q99435 816 aa3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 SELENOOQ9BVL4 669 aa3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 SPATA5L1Q9BVQ7 753 aa3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 TRIM54Q9BYV2 358 aa3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 LRRC27Q9C0I9 530 aa3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 AGO4Q9HCK5 861 aaKnown RBP3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 STARD7Q9NQZ5 370 aa3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 VPS45Q9NRW7 570 aa3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 LRIT1Q9P2V4 623 aa3.52□□□□□ -1.85
HMGB1P9-201ENST00000429856 ANAPC4Q9UJX5 808 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms