RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 TXNDC16Q9P2K2 825 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 TRIOBPQ9H2D6 2365 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 CCDC78A2IDD5 438 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 KLHL33A6NCF5 533 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 LIASO43766 372 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 PRPSAP2O60256 369 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 ENO1P06733 434 aaKnown RBP8.43□□□□□ -1.06
HPS4-205ENST00000429411 PGK2P07205 417 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 GSTA1P08263 222 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 CYP2C8P10632 490 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 UNGP13051 313 aaPredicted RBP8.43□□□□□ -1.06
HPS4-205ENST00000429411 LACTB2Q53H82 288 aaPredicted RBP8.43□□□□□ -1.06
HPS4-205ENST00000429411 C6orf163Q5TEZ5 329 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 ANKS1BQ7Z6G8 1248 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 TTC16Q8NEE8 873 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 JOSD2Q8TAC2 188 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 DDX1Q92499 740 aaKnown RBP8.43□□□□□ -1.06
HPS4-205ENST00000429411 FAM161BQ96MY7 647 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 TTC1Q99614 292 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 MRIQ9BWK5 157 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 TSSK1BQ9BXA7 367 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 SMYD3Q9H7B4 428 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 CREBZFQ9NS37 354 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.43□□□□□ -1.06
HPS4-205ENST00000429411 C15orf41Q9Y2V0 281 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 SRRM3A6NNA2 597 aaPredicted RBP8.42□□□□□ -1.06
HPS4-205ENST00000429411 TXNDC9O14530 226 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 BGNP21810 368 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 TCF7P36402 384 aaPredicted RBP8.42□□□□□ -1.06
HPS4-205ENST00000429411 ZNF280AP59817 542 aaPredicted RBP8.42□□□□□ -1.06
HPS4-205ENST00000429411 MTFR1Q15390 333 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 TAF5Q15542 800 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 AMHR2Q16671 573 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 LY6KQ17RY6 165 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 ANKRD22Q5VYY1 191 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 DENND1BQ6P3S1 775 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 TTC8Q8TAM2 541 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 CCHCR1Q8TD31 782 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 CCDC124Q96CT7 223 aaKnown RBP8.42□□□□□ -1.06
HPS4-205ENST00000429411 MFSD14AQ96MC6 490 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 SLITRK1Q96PX8 696 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 TIPINQ9BVW5 301 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 RPF1Q9H9Y2 349 aaKnown RBP8.42□□□□□ -1.06
HPS4-205ENST00000429411 FBXO6Q9NRD1 293 aaPredicted RBP8.42□□□□□ -1.06
HPS4-205ENST00000429411 SLC17A7Q9P2U7 560 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 CPA4Q9UI42 421 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 ATXN2Q99700 1313 aaKnown RBP8.42□□□□□ -1.06
HPS4-205ENST00000429411 TTLL13PA6NNM8 815 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 HOXA2O43364 376 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 ITGB3P05106 788 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 SUPT20HL2P0C7V6 817 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 CXCL8P10145 99 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 PYGBP11216 843 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 PDGFRAP16234 1089 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 CCND1P24385 295 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 ELK3P41970 407 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 ALDH18A1P54886 795 aaKnown RBP8.42□□□□□ -1.06
HPS4-205ENST00000429411 VCPP55072 806 aaKnown RBP8.42□□□□□ -1.06
HPS4-205ENST00000429411 GDF10P55107 478 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 GEMIN4P57678 1058 aaKnown RBP8.42□□□□□ -1.06
HPS4-205ENST00000429411 TMEM62Q0P6H9 643 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 MROH9Q5TGP6 573 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 EMC10Q5UCC4 262 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 ZCCHC9Q8N567 271 aaKnown RBP8.42□□□□□ -1.06
HPS4-205ENST00000429411 ARMC2Q8NEN0 867 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 PPP1R36Q96LQ0 422 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 MRPL4Q9BYD3 311 aaKnown RBP8.42□□□□□ -1.06
HPS4-205ENST00000429411 CEP41Q9BYV8 373 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 NIF3L1Q9GZT8 377 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 ARIH1Q9Y4X5 557 aaPredicted RBP8.42□□□□□ -1.06
HPS4-205ENST00000429411 ANKRD31Q8N7Z5 1873 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 MGRN1O60291 552 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 VNN1O95497 513 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 MCCD1P59942 119 aaPredicted RBP8.42□□□□□ -1.06
HPS4-205ENST00000429411 PSMD6Q15008 389 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 CYP1B1Q16678 543 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 SPDYCQ5MJ68 293 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 ANKRD20A2Q5SQ80 823 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 ANKRD20A1Q5TYW2 823 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 FAM160B1Q5W0V3 765 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 MFSD5Q6N075 450 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 MON1BQ7L1V2 547 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 TRABD2AQ86V40 505 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 ZNF677Q86XU0 584 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 CCNYQ8ND76 341 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 OLIG1Q8TAK6 271 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 ZNF75CPQ92670 426 aaPredicted RBP8.42□□□□□ -1.06
HPS4-205ENST00000429411 KLRG1Q96E93 195 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 CYP4F11Q9HBI6 524 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 AVENQ9NQS1 362 aaPredicted RBP8.42□□□□□ -1.06
HPS4-205ENST00000429411 PCMTD2Q9NV79 361 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 MCM8Q9UJA3 840 aa8.42□□□□□ -1.06
HPS4-205ENST00000429411 TRIM49D1C9J1S8 452 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 B4GALT5O43286 388 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 FAM155BO75949 473 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 SERPINB3P29508 390 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 EPHB1P54762 984 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 HADHBP55084 474 aaKnown RBP8.41□□□□□ -1.06
HPS4-205ENST00000429411 BACE1P56817 501 aa8.41□□□□□ -1.06
HPS4-205ENST00000429411 BCAR1P56945 870 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms