RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 TRIM59Q8IWR1 403 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 HACE1Q8IYU2 909 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 SNX27Q96L92 541 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 MFSD14AQ96MC6 490 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 ZFP42Q96MM3 310 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 KRT12Q99456 494 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 LBHD1Q9BQE6 289 aaPredicted RBP12.01□□□□□ -0.49
CECR3-201ENST00000428828 C1orf112Q9NSG2 853 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 ABCF3Q9NUQ8 709 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 INPP5FQ9Y2H2 1132 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 PTPRJQ12913 1337 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 KIAA1671Q9BY89 1806 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 ZSCAN5CA6NGD5 496 aaPredicted RBP12.01□□□□□ -0.49
CECR3-201ENST00000428828 MAPK13O15264 365 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 NFICP08651 508 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 TPBGLP0DKB5 382 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 FGFR1P11362 822 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 SKIP12755 728 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 DESP17661 470 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 MARSP56192 900 aaKnown RBP12.01□□□□□ -0.49
CECR3-201ENST00000428828 PSMD6Q15008 389 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 MAN2A1Q16706 1144 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 KRT71Q3SY84 523 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 WASHC2DQ5SRD0 308 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 JADE1Q6IE81 842 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 AGMOQ6ZNB7 445 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 TMC3Q7Z5M5 1100 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 TMCO2Q7Z6W1 182 aaPredicted RBP12.01□□□□□ -0.49
CECR3-201ENST00000428828 LRRC34Q8IZ02 419 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 TMEM130Q8N3G9 435 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 RBBP8NLQ8NC74 664 aaPredicted RBP12.01□□□□□ -0.49
CECR3-201ENST00000428828 STKLD1Q8NE28 680 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 SLC35C1Q96A29 364 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 PGBD4Q96DM1 585 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 TMEM109Q9BVC6 243 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 STMN4Q9H169 189 aaPredicted RBP12.01□□□□□ -0.49
CECR3-201ENST00000428828 RSAD1Q9HA92 442 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 LUC7LQ9NQ29 371 aaKnown RBP12.01□□□□□ -0.49
CECR3-201ENST00000428828 FAM114A2Q9NRY5 505 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 LRFN2Q9ULH4 789 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 SCN1AP35498 2009 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 CCDC188H7C350 402 aa12□□□□□ -0.49
CECR3-201ENST00000428828 IL18RAPO95256 599 aa12□□□□□ -0.49
CECR3-201ENST00000428828 PFKMP08237 780 aa12□□□□□ -0.49
CECR3-201ENST00000428828 ACTN1P12814 892 aa12□□□□□ -0.49
CECR3-201ENST00000428828 CHN1P15882 459 aa12□□□□□ -0.49
CECR3-201ENST00000428828 GCLMP48507 274 aa12□□□□□ -0.49
CECR3-201ENST00000428828 TUBP50607 506 aa12□□□□□ -0.49
CECR3-201ENST00000428828 AFF1P51825 1210 aaKnown RBP12□□□□□ -0.49
CECR3-201ENST00000428828 MRPS25P82663 173 aaKnown RBP12□□□□□ -0.49
CECR3-201ENST00000428828 TFAMQ00059 246 aaKnown RBP12□□□□□ -0.49
CECR3-201ENST00000428828 KCNH2Q12809 1159 aa12□□□□□ -0.49
CECR3-201ENST00000428828 HLTFQ14527 1009 aaKnown RBP eCLIP12□□□□□ -0.49
CECR3-201ENST00000428828 FAM117BQ6P1L5 589 aa12□□□□□ -0.49
CECR3-201ENST00000428828 ZNF365Q70YC5 407 aa12□□□□□ -0.49
CECR3-201ENST00000428828 C16orf59Q7L2K0 433 aa12□□□□□ -0.49
CECR3-201ENST00000428828 AGGF1Q8N302 714 aaeCLIP12□□□□□ -0.49
CECR3-201ENST00000428828 HELQQ8TDG4 1101 aa12□□□□□ -0.49
CECR3-201ENST00000428828 PRCCQ92733 491 aaPredicted RBP12□□□□□ -0.49
CECR3-201ENST00000428828 KIF12Q96FN5 646 aa12□□□□□ -0.49
CECR3-201ENST00000428828 RPS6KC1Q96S38 1066 aa12□□□□□ -0.49
CECR3-201ENST00000428828 GAD1Q99259 594 aa12□□□□□ -0.49
CECR3-201ENST00000428828 NDNQ99608 321 aa12□□□□□ -0.49
CECR3-201ENST00000428828 TRAIPQ9BWF2 469 aa12□□□□□ -0.49
CECR3-201ENST00000428828 TXLNGYQ9BZA5 131 aa12□□□□□ -0.49
CECR3-201ENST00000428828 FBXL5Q9UKA1 691 aa12□□□□□ -0.49
CECR3-201ENST00000428828 PCDHB7Q9Y5E2 793 aa12□□□□□ -0.49
CECR3-201ENST00000428828 LAMA2P24043 3122 aaKnown RBP12□□□□□ -0.49
CECR3-201ENST00000428828 A0A1B0GVG6 124 aa11.99□□□□□ -0.49
CECR3-201ENST00000428828 ZNF623O75123 536 aa11.99□□□□□ -0.49
CECR3-201ENST00000428828 AGTP01019 485 aa11.99□□□□□ -0.49
CECR3-201ENST00000428828 TMEM191BP0C7N4 346 aa11.99□□□□□ -0.49
CECR3-201ENST00000428828 CXCR5P32302 372 aa11.99□□□□□ -0.49
CECR3-201ENST00000428828 MAGEA1P43355 309 aa11.99□□□□□ -0.49
CECR3-201ENST00000428828 GATMP50440 423 aa11.99□□□□□ -0.49
CECR3-201ENST00000428828 DEFB103AP81534 67 aa11.99□□□□□ -0.49
CECR3-201ENST00000428828 PPP3CAQ08209 521 aa11.99□□□□□ -0.49
CECR3-201ENST00000428828 GSTA3Q16772 222 aa11.99□□□□□ -0.49
CECR3-201ENST00000428828 ASTE1Q2TB18 679 aaPredicted RBP11.99□□□□□ -0.49
CECR3-201ENST00000428828 VWA3BQ502W6 1294 aa11.99□□□□□ -0.49
CECR3-201ENST00000428828 MIIPQ5JXC2 388 aa11.99□□□□□ -0.49
CECR3-201ENST00000428828 C1orf220Q5T0J3 134 aa11.99□□□□□ -0.49
CECR3-201ENST00000428828 MEI1Q5TIA1 1274 aa11.99□□□□□ -0.49
CECR3-201ENST00000428828 MRPL10Q7Z7H8 261 aaKnown RBP11.99□□□□□ -0.49
CECR3-201ENST00000428828 USP37Q86T82 979 aa11.99□□□□□ -0.49
CECR3-201ENST00000428828 ZNF598Q86UK7 904 aaKnown RBP11.99□□□□□ -0.49
CECR3-201ENST00000428828 OR5B17Q8NGF7 314 aa11.99□□□□□ -0.49
CECR3-201ENST00000428828 ACTRT1Q8TDG2 376 aa11.99□□□□□ -0.49
CECR3-201ENST00000428828 DNAJC9Q8WXX5 260 aa11.99□□□□□ -0.49
CECR3-201ENST00000428828 ZMAT2Q96NC0 199 aaKnown RBP11.99□□□□□ -0.49
CECR3-201ENST00000428828 HAPLN3Q96S86 360 aa11.99□□□□□ -0.49
CECR3-201ENST00000428828 CGRRF1Q99675 332 aa11.99□□□□□ -0.49
CECR3-201ENST00000428828 ELAC2Q9BQ52 826 aaKnown RBP11.99□□□□□ -0.49
CECR3-201ENST00000428828 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.99□□□□□ -0.49
CECR3-201ENST00000428828 MTMR12Q9C0I1 747 aa11.99□□□□□ -0.49
CECR3-201ENST00000428828 ADAM7Q9H2U9 754 aa11.99□□□□□ -0.49
CECR3-201ENST00000428828 SLITRK6Q9H5Y7 841 aa11.99□□□□□ -0.49
CECR3-201ENST00000428828 SMARCAL1Q9NZC9 954 aa11.99□□□□□ -0.49
CECR3-201ENST00000428828 EHD2Q9NZN4 543 aa11.99□□□□□ -0.49
CECR3-201ENST00000428828 ARHGAP20Q9P2F6 1191 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms