RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 NT5DC3Q86UY8 548 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 COG1Q8WTW3 980 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 SCFD1Q8WVM8 642 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 KIAA1683Q9H0B3 1180 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 RSAD1Q9HA92 442 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 SCHIP1Q9P0W5 487 aaPredicted RBP10.11□□□□□ -0.79
SNX13-203ENST00000428135 KIAA1210Q9ULL0 1709 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 A0A087X0T9 212 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 CXCL11O14625 94 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 ARIH2O95376 493 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 GJB1P08034 283 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 FAM228BP0C875 321 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 PSEN2P49810 448 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 PLD1Q13393 1074 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 OVOS1Q6IE37 1185 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 TRIML2Q8N7C3 387 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 REPS2Q8NFH8 660 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 ADAM2Q99965 735 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 ASPSCR1Q9BZE9 553 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 ADAM21Q9UKJ8 722 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 GMNCA6NCL1 334 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 AKAP3O75969 853 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 HLA-DPA1P20036 260 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 CTCFP49711 727 aaPredicted RBP10.11□□□□□ -0.79
SNX13-203ENST00000428135 ESRRGP62508 458 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 CCZ1BP86790 482 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 CCZ1P86791 482 aaPredicted RBP10.11□□□□□ -0.79
SNX13-203ENST00000428135 TPGS1Q6ZTW0 290 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 RBM23Q86U06 439 aaKnown RBP10.11□□□□□ -0.79
SNX13-203ENST00000428135 JAMLQ86YT9 394 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 RDM1Q8NG50 284 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 EXOC4Q96A65 974 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 CEP19Q96LK0 163 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 A1CFQ9NQ94 594 aaKnown RBP10.11□□□□□ -0.79
SNX13-203ENST00000428135 C6orf203Q9P0P8 240 aaPredicted RBP10.11□□□□□ -0.79
SNX13-203ENST00000428135 SPASTQ9UBP0 616 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 ATP8B1O43520 1251 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 ACADMP11310 421 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 CYP11B1P15538 503 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 KRT4P19013 534 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 ATP6V1E1P36543 226 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 ADIGQ0VDE8 80 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 SLC44A2Q8IWA5 706 aaPredicted RBP10.11□□□□□ -0.79
SNX13-203ENST00000428135 TUBB6Q9BUF5 446 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 KDM4CQ9H3R0 1056 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 CACNA2D2Q9NY47 1150 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.11□□□□□ -0.79
SNX13-203ENST00000428135 MYO1GB0I1T2 1018 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 EML1O00423 815 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 SYNCRIPO60506 623 aaKnown RBP10.11□□□□□ -0.79
SNX13-203ENST00000428135 MYL2P10916 166 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 EEF1DP29692 281 aaKnown RBP10.11□□□□□ -0.79
SNX13-203ENST00000428135 CENPAP49450 140 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 SCNN1BP51168 640 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 NDST1P52848 882 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 PMS1P54277 932 aaKnown RBP10.11□□□□□ -0.79
SNX13-203ENST00000428135 CYP24A1Q07973 514 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 MAPRE1Q15691 268 aaKnown RBP10.11□□□□□ -0.79
SNX13-203ENST00000428135 SLC39A12Q504Y0 691 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 FBXO47Q5MNV8 452 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 SLFN11Q7Z7L1 901 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 JADE3Q92613 823 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 EHD4Q9H223 541 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 NEUROG2Q9H2A3 272 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 CYP4F12Q9HCS2 524 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 OSGEPQ9NPF4 335 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 TMEM161AQ9NX61 479 aa10.11□□□□□ -0.79
SNX13-203ENST00000428135 TRIM16O95361 564 aa10.1□□□□□ -0.79
SNX13-203ENST00000428135 POLBP06746 335 aa10.1□□□□□ -0.79
SNX13-203ENST00000428135 PWP1Q13610 501 aa10.1□□□□□ -0.79
SNX13-203ENST00000428135 ZNF280DQ6N043 979 aa10.1□□□□□ -0.79
SNX13-203ENST00000428135 ZNF720Q7Z2F6 126 aa10.1□□□□□ -0.79
SNX13-203ENST00000428135 MIER2Q8N344 545 aa10.1□□□□□ -0.79
SNX13-203ENST00000428135 LPPQ93052 612 aa10.1□□□□□ -0.79
SNX13-203ENST00000428135 ABHD8Q96I13 439 aa10.1□□□□□ -0.79
SNX13-203ENST00000428135 ATP6V1G3Q96LB4 118 aa10.1□□□□□ -0.79
SNX13-203ENST00000428135 ETNK1Q9HBU6 452 aa10.1□□□□□ -0.79
SNX13-203ENST00000428135 FBXL21Q9UKT6 434 aa10.1□□□□□ -0.79
SNX13-203ENST00000428135 HEATR9A2RTY3 570 aa10.1□□□□□ -0.79
SNX13-203ENST00000428135 ANGPT2O15123 496 aa10.1□□□□□ -0.79
SNX13-203ENST00000428135 RHOCP08134 193 aa10.1□□□□□ -0.79
SNX13-203ENST00000428135 RRM1P23921 792 aa10.1□□□□□ -0.79
SNX13-203ENST00000428135 MAGEA4P43358 317 aa10.1□□□□□ -0.79
SNX13-203ENST00000428135 POLE2P56282 527 aa10.1□□□□□ -0.79
SNX13-203ENST00000428135 PTPAQ15257 358 aa10.1□□□□□ -0.79
SNX13-203ENST00000428135 MTHFD1LQ6UB35 978 aa10.1□□□□□ -0.79
SNX13-203ENST00000428135 DAGLBQ8NCG7 672 aa10.1□□□□□ -0.79
SNX13-203ENST00000428135 ATP8B4Q8TF62 1192 aa10.1□□□□□ -0.79
SNX13-203ENST00000428135 NFKBIZQ9BYH8 718 aa10.1□□□□□ -0.79
SNX13-203ENST00000428135 LACTBL1A8MY62 500 aa10.1□□□□□ -0.79
SNX13-203ENST00000428135 C5orf58C9J3I9 102 aa10.1□□□□□ -0.79
SNX13-203ENST00000428135 FGFR1P11362 822 aa10.1□□□□□ -0.79
SNX13-203ENST00000428135 OXCT1P55809 520 aa10.1□□□□□ -0.79
SNX13-203ENST00000428135 DAB2P98082 770 aa10.1□□□□□ -0.79
SNX13-203ENST00000428135 NR1H3Q13133 447 aa10.1□□□□□ -0.79
SNX13-203ENST00000428135 CCDC85BQ15834 202 aaPredicted RBP10.1□□□□□ -0.79
SNX13-203ENST00000428135 CLEC16AQ2KHT3 1053 aa10.1□□□□□ -0.79
SNX13-203ENST00000428135 SCUBE3Q8IX30 993 aa10.1□□□□□ -0.79
SNX13-203ENST00000428135 TMEM176AQ96HP8 235 aa10.1□□□□□ -0.79
SNX13-203ENST00000428135 CALR3Q96L12 384 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms