RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 UBR7Q8N806 425 aa16.67■□□□□ 0.26
CLK3P2-201ENST00000427566 ZSWIM3Q96MP5 696 aa16.67■□□□□ 0.26
CLK3P2-201ENST00000427566 KREMEN1Q96MU8 473 aa16.67■□□□□ 0.26
CLK3P2-201ENST00000427566 ZNF518BQ9C0D4 1074 aa16.67■□□□□ 0.26
CLK3P2-201ENST00000427566 SIX2Q9NPC8 291 aa16.67■□□□□ 0.26
CLK3P2-201ENST00000427566 FAM49BQ9NUQ9 324 aa16.67■□□□□ 0.26
CLK3P2-201ENST00000427566 HCN4Q9Y3Q4 1203 aa16.67■□□□□ 0.26
CLK3P2-201ENST00000427566 TICRRQ7Z2Z1 1910 aa16.66■□□□□ 0.26
CLK3P2-201ENST00000427566 ANAPC1Q9H1A4 1944 aa16.66■□□□□ 0.26
CLK3P2-201ENST00000427566 MICAL2O94851 1124 aa16.66■□□□□ 0.26
CLK3P2-201ENST00000427566 GRIK1P39086 918 aa16.66■□□□□ 0.26
CLK3P2-201ENST00000427566 COPB1P53618 953 aaKnown RBP16.66■□□□□ 0.26
CLK3P2-201ENST00000427566 RAD23BP54727 409 aa16.66■□□□□ 0.26
CLK3P2-201ENST00000427566 CYP4F8P98187 520 aa16.66■□□□□ 0.26
CLK3P2-201ENST00000427566 CFAP221Q4G0U5 840 aa16.66■□□□□ 0.26
CLK3P2-201ENST00000427566 ARHGAP15Q53QZ3 475 aa16.66■□□□□ 0.26
CLK3P2-201ENST00000427566 FAM78AQ5JUQ0 283 aa16.66■□□□□ 0.26
CLK3P2-201ENST00000427566 STXBP5Q5T5C0 1151 aa16.66■□□□□ 0.26
CLK3P2-201ENST00000427566 GPR158Q5T848 1215 aa16.66■□□□□ 0.26
CLK3P2-201ENST00000427566 TANGO2Q6ICL3 276 aa16.66■□□□□ 0.26
CLK3P2-201ENST00000427566 SIX5Q8N196 739 aa16.66■□□□□ 0.26
CLK3P2-201ENST00000427566 FBXL6Q8N531 539 aa16.66■□□□□ 0.26
CLK3P2-201ENST00000427566 SLC4A11Q8NBS3 891 aa16.66■□□□□ 0.26
CLK3P2-201ENST00000427566 FLCNQ8NFG4 579 aa16.66■□□□□ 0.26
CLK3P2-201ENST00000427566 ZSCAN18Q8TBC5 510 aaPredicted RBP16.66■□□□□ 0.26
CLK3P2-201ENST00000427566 FAXDC2Q96IV6 333 aa16.66■□□□□ 0.26
CLK3P2-201ENST00000427566 TNIP3Q96KP6 325 aa16.66■□□□□ 0.26
CLK3P2-201ENST00000427566 NT5C1AQ9BXI3 368 aa16.66■□□□□ 0.26
CLK3P2-201ENST00000427566 PLA2G2FQ9BZM2 168 aa16.66■□□□□ 0.26
CLK3P2-201ENST00000427566 ZFP14Q9HCL3 533 aa16.66■□□□□ 0.26
CLK3P2-201ENST00000427566 ABCB6Q9NP58 842 aa16.66■□□□□ 0.26
CLK3P2-201ENST00000427566 LIMA1Q9UHB6 759 aaKnown RBP16.66■□□□□ 0.26
CLK3P2-201ENST00000427566 AJAP1Q9UKB5 411 aaPredicted RBP16.66■□□□□ 0.26
CLK3P2-201ENST00000427566 KIF26AQ9ULI4 1882 aaPredicted RBP16.65■□□□□ 0.26
CLK3P2-201ENST00000427566 GTPBP10A4D1E9 387 aaKnown RBP16.65■□□□□ 0.26
CLK3P2-201ENST00000427566 RNF225M0QZC1 329 aaPredicted RBP16.65■□□□□ 0.26
CLK3P2-201ENST00000427566 FGF19O95750 216 aa16.65■□□□□ 0.26
CLK3P2-201ENST00000427566 CALCAP01258 141 aa16.65■□□□□ 0.26
CLK3P2-201ENST00000427566 CSH1P0DML2 217 aa16.65■□□□□ 0.26
CLK3P2-201ENST00000427566 CSH2P0DML3 217 aa16.65■□□□□ 0.26
CLK3P2-201ENST00000427566 CDK11BP21127 795 aaKnown RBP16.65■□□□□ 0.26
CLK3P2-201ENST00000427566 ACO1P21399 889 aaKnown RBP16.65■□□□□ 0.26
CLK3P2-201ENST00000427566 ANXA13P27216 316 aa16.65■□□□□ 0.26
CLK3P2-201ENST00000427566 GPC5P78333 572 aa16.65■□□□□ 0.26
CLK3P2-201ENST00000427566 GAREM2Q75VX8 874 aa16.65■□□□□ 0.26
CLK3P2-201ENST00000427566 BMP8AQ7Z5Y6 402 aa16.65■□□□□ 0.26
CLK3P2-201ENST00000427566 FUKQ8N0W3 1084 aa16.65■□□□□ 0.26
CLK3P2-201ENST00000427566 FUBP3Q96I24 572 aaKnown RBP eCLIP16.65■□□□□ 0.26
CLK3P2-201ENST00000427566 MED10Q9BTT4 135 aa16.65■□□□□ 0.26
CLK3P2-201ENST00000427566 UBE2TQ9NPD8 197 aaPredicted RBP16.65■□□□□ 0.26
CLK3P2-201ENST00000427566 MIA3Q5JRA6 1907 aa16.64■□□□□ 0.25
CLK3P2-201ENST00000427566 TRIOO75962 3097 aa16.64■□□□□ 0.25
CLK3P2-201ENST00000427566 LRRC10BA6NIK2 292 aa16.64■□□□□ 0.25
CLK3P2-201ENST00000427566 SLC38A8A6NNN8 435 aa16.64■□□□□ 0.25
CLK3P2-201ENST00000427566 SMTNL1A8MU46 457 aa16.64■□□□□ 0.25
CLK3P2-201ENST00000427566 ESPNB1AK53 854 aa16.64■□□□□ 0.25
CLK3P2-201ENST00000427566 ECI2O75521 394 aa16.64■□□□□ 0.25
CLK3P2-201ENST00000427566 ADCY5O95622 1261 aa16.64■□□□□ 0.25
CLK3P2-201ENST00000427566 TBXAS1P24557 533 aaPredicted RBP16.64■□□□□ 0.25
CLK3P2-201ENST00000427566 CDC25CP30307 473 aa16.64■□□□□ 0.25
CLK3P2-201ENST00000427566 VIPR2P41587 438 aa16.64■□□□□ 0.25
CLK3P2-201ENST00000427566 KLK7P49862 253 aa16.64■□□□□ 0.25
CLK3P2-201ENST00000427566 GRM2Q14416 872 aa16.64■□□□□ 0.25
CLK3P2-201ENST00000427566 FAM35AQ86V20 835 aa16.64■□□□□ 0.25
CLK3P2-201ENST00000427566 SLC2A14Q8TDB8 520 aa16.64■□□□□ 0.25
CLK3P2-201ENST00000427566 SMARCD2Q92925 531 aa16.64■□□□□ 0.25
CLK3P2-201ENST00000427566 TMEM176AQ96HP8 235 aa16.64■□□□□ 0.25
CLK3P2-201ENST00000427566 ASB16Q96NS5 453 aa16.64■□□□□ 0.25
CLK3P2-201ENST00000427566 KCNK16Q96T55 309 aa16.64■□□□□ 0.25
CLK3P2-201ENST00000427566 GPR88Q9GZN0 384 aa16.64■□□□□ 0.25
CLK3P2-201ENST00000427566 MYO16Q9Y6X6 1858 aa16.63■□□□□ 0.25
CLK3P2-201ENST00000427566 BECN2A8MW95 431 aa16.63■□□□□ 0.25
CLK3P2-201ENST00000427566 F8VP50 259 aa16.63■□□□□ 0.25
CLK3P2-201ENST00000427566 BEST1O76090 585 aa16.63■□□□□ 0.25
CLK3P2-201ENST00000427566 ADORA2BP29275 332 aa16.63■□□□□ 0.25
CLK3P2-201ENST00000427566 GCNT1Q02742 428 aa16.63■□□□□ 0.25
CLK3P2-201ENST00000427566 IFRD2Q12894 506 aaPredicted RBP16.63■□□□□ 0.25
CLK3P2-201ENST00000427566 PPP1R26Q5T8A7 1209 aaPredicted RBP16.63■□□□□ 0.25
CLK3P2-201ENST00000427566 TMEM270Q6UE05 265 aa16.63■□□□□ 0.25
CLK3P2-201ENST00000427566 ELSPBP1Q96BH3 223 aa16.63■□□□□ 0.25
CLK3P2-201ENST00000427566 HEXIM2Q96MH2 286 aaKnown RBP16.63■□□□□ 0.25
CLK3P2-201ENST00000427566 WNT16Q9UBV4 365 aa16.63■□□□□ 0.25
CLK3P2-201ENST00000427566 APEX2Q9UBZ4 518 aa16.63■□□□□ 0.25
CLK3P2-201ENST00000427566 PCDHB4Q9Y5E5 795 aa16.63■□□□□ 0.25
CLK3P2-201ENST00000427566 DPYSL4O14531 572 aa16.62■□□□□ 0.25
CLK3P2-201ENST00000427566 HMGA1P17096 107 aaKnown RBP16.62■□□□□ 0.25
CLK3P2-201ENST00000427566 FCARP24071 287 aa16.62■□□□□ 0.25
CLK3P2-201ENST00000427566 MAGEA11P43364 429 aa16.62■□□□□ 0.25
CLK3P2-201ENST00000427566 VCPP55072 806 aaKnown RBP16.62■□□□□ 0.25
CLK3P2-201ENST00000427566 ARHGAP44Q17R89 818 aa16.62■□□□□ 0.25
CLK3P2-201ENST00000427566 VSTM1Q6UX27 236 aa16.62■□□□□ 0.25
CLK3P2-201ENST00000427566 ZSCAN30Q86W11 494 aa16.62■□□□□ 0.25
CLK3P2-201ENST00000427566 ZMIZ2Q8NF64 920 aa16.62■□□□□ 0.25
CLK3P2-201ENST00000427566 CYFIP2Q96F07 1278 aa16.62■□□□□ 0.25
CLK3P2-201ENST00000427566 SMOQ99835 787 aa16.62■□□□□ 0.25
CLK3P2-201ENST00000427566 IL21Q9HBE4 155 aa16.62■□□□□ 0.25
CLK3P2-201ENST00000427566 COL4A3Q01955 1670 aa16.62■□□□□ 0.25
CLK3P2-201ENST00000427566 HELZP42694 1942 aaKnown RBP16.62■□□□□ 0.25
CLK3P2-201ENST00000427566 KRBA1A5PL33 1030 aa16.61■□□□□ 0.25
CLK3P2-201ENST00000427566 TRIM66O15016 1216 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms