RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 RXFP2Q8WXD0 754 aa18.26■□□□□ 0.51
FN1-208ENST00000426059 KHSRPQ92945 711 aaKnown RBP eCLIP18.26■□□□□ 0.515e-10■■■■□ 21.8
FN1-208ENST00000426059 CFAP57Q96MR6 1250 aa18.26■□□□□ 0.51
FN1-208ENST00000426059 GDAP1L1Q96MZ0 367 aa18.26■□□□□ 0.51
FN1-208ENST00000426059 TMEM30AQ9NV96 361 aa18.26■□□□□ 0.51
FN1-208ENST00000426059 STIM2Q9P246 746 aa18.26■□□□□ 0.51
FN1-208ENST00000426059 PCSK1NQ9UHG2 260 aa18.26■□□□□ 0.51
FN1-208ENST00000426059 TSC2P49815 1807 aa18.26■□□□□ 0.51
FN1-208ENST00000426059 IL1R2P27930 398 aa18.25■□□□□ 0.51
FN1-208ENST00000426059 TTC3P53804 2025 aa18.25■□□□□ 0.51
FN1-208ENST00000426059 GUCY2DQ02846 1103 aa18.25■□□□□ 0.51
FN1-208ENST00000426059 DSC1Q08554 894 aa18.25■□□□□ 0.51
FN1-208ENST00000426059 FBXO46Q6PJ61 603 aaPredicted RBP18.25■□□□□ 0.51
FN1-208ENST00000426059 TMCO3Q6UWJ1 677 aa18.25■□□□□ 0.51
FN1-208ENST00000426059 ABI1Q8IZP0 508 aa18.25■□□□□ 0.51
FN1-208ENST00000426059 PRELID2Q8N945 189 aa18.25■□□□□ 0.51
FN1-208ENST00000426059 KCNK16Q96T55 309 aa18.25■□□□□ 0.51
FN1-208ENST00000426059 KRT82Q9NSB4 513 aa18.25■□□□□ 0.51
FN1-208ENST00000426059 CCDC151A5D8V7 595 aa18.25■□□□□ 0.51
FN1-208ENST00000426059 SETSIPP0DME0 302 aa18.25■□□□□ 0.51
FN1-208ENST00000426059 RARAP10276 462 aa18.25■□□□□ 0.51
FN1-208ENST00000426059 HSPA8P11142 646 aaKnown RBP18.25■□□□□ 0.51
FN1-208ENST00000426059 PDGFRAP16234 1089 aa18.25■□□□□ 0.51
FN1-208ENST00000426059 PBX3P40426 434 aa18.25■□□□□ 0.51
FN1-208ENST00000426059 ATP11AP98196 1134 aa18.25■□□□□ 0.51
FN1-208ENST00000426059 SLC6A3Q01959 620 aa18.25■□□□□ 0.51
FN1-208ENST00000426059 CLEC20AQ6ZU45 233 aa18.25■□□□□ 0.51
FN1-208ENST00000426059 NIPA2Q8N8Q9 360 aa18.25■□□□□ 0.51
FN1-208ENST00000426059 PAWRQ96IZ0 340 aaKnown RBP18.25■□□□□ 0.51
FN1-208ENST00000426059 UROC1Q96N76 676 aa18.25■□□□□ 0.51
FN1-208ENST00000426059 FAM193BQ96PV7 902 aaPredicted RBP18.25■□□□□ 0.51
FN1-208ENST00000426059 NAP1L3Q99457 506 aaPredicted RBP18.25■□□□□ 0.51
FN1-208ENST00000426059 DUSP16Q9BY84 665 aa18.25■□□□□ 0.51
FN1-208ENST00000426059 EPB41L5Q9HCM4 733 aa18.25■□□□□ 0.51
FN1-208ENST00000426059 CCDC188H7C350 402 aa18.24■□□□□ 0.51
FN1-208ENST00000426059 M0QZQ0 153 aa18.24■□□□□ 0.51
FN1-208ENST00000426059 TTI1O43156 1089 aa18.24■□□□□ 0.51
FN1-208ENST00000426059 ZRANB2O95218 330 aaKnown RBP eCLIP18.24■□□□□ 0.51
FN1-208ENST00000426059 RALAP11233 206 aa18.24■□□□□ 0.51
FN1-208ENST00000426059 NDUFV1P49821 464 aa18.24■□□□□ 0.51
FN1-208ENST00000426059 BRD3Q15059 726 aa18.24■□□□□ 0.51
FN1-208ENST00000426059 OR10T2Q8NGX3 314 aa18.24■□□□□ 0.51
FN1-208ENST00000426059 FAM118BQ9BPY3 351 aa18.24■□□□□ 0.51
FN1-208ENST00000426059 TMLHEQ9NVH6 421 aa18.24■□□□□ 0.51
FN1-208ENST00000426059 LRFN2Q9ULH4 789 aa18.24■□□□□ 0.51
FN1-208ENST00000426059 TANC1Q9C0D5 1861 aa18.24■□□□□ 0.51
FN1-208ENST00000426059 C2CD4BA6NLJ0 364 aa18.24■□□□□ 0.51
FN1-208ENST00000426059 UPP2O95045 317 aa18.24■□□□□ 0.51
FN1-208ENST00000426059 COL6A1P12109 1028 aa18.24■□□□□ 0.51
FN1-208ENST00000426059 KRT10P13645 584 aa18.24■□□□□ 0.51
FN1-208ENST00000426059 NPR3P17342 541 aa18.24■□□□□ 0.51
FN1-208ENST00000426059 TFE3P19532 575 aaPredicted RBP18.24■□□□□ 0.51
FN1-208ENST00000426059 ADCY2Q08462 1091 aa18.24■□□□□ 0.51
FN1-208ENST00000426059 ADIGQ0VDE8 80 aa18.24■□□□□ 0.51
FN1-208ENST00000426059 SMC1AQ14683 1233 aaKnown RBP18.24■□□□□ 0.51
FN1-208ENST00000426059 SIX1Q15475 284 aaPredicted RBP18.24■□□□□ 0.51
FN1-208ENST00000426059 KAZNQ674X7 775 aa18.24■□□□□ 0.51
FN1-208ENST00000426059 OVOS1Q6IE37 1185 aa18.24■□□□□ 0.51
FN1-208ENST00000426059 LRRTM3Q86VH5 581 aa18.24■□□□□ 0.51
FN1-208ENST00000426059 KATNAL2Q8IYT4 538 aa18.24■□□□□ 0.51
FN1-208ENST00000426059 STK32AQ8WU08 396 aa18.24■□□□□ 0.51
FN1-208ENST00000426059 RAPGEF5Q92565 580 aa18.24■□□□□ 0.51
FN1-208ENST00000426059 CASD1Q96PB1 797 aa18.24■□□□□ 0.51
FN1-208ENST00000426059 ARFGAP3Q9NP61 516 aa18.24■□□□□ 0.51
FN1-208ENST00000426059 AP1G2O75843 785 aa18.23■□□□□ 0.51
FN1-208ENST00000426059 KRT1P04264 644 aa18.23■□□□□ 0.51
FN1-208ENST00000426059 FAM163BP0C2L3 166 aa18.23■□□□□ 0.51
FN1-208ENST00000426059 GPD1P21695 349 aa18.23■□□□□ 0.51
FN1-208ENST00000426059 PLA2G4AP47712 749 aa18.23■□□□□ 0.51
FN1-208ENST00000426059 SLC25A11Q02978 314 aaKnown RBP18.23■□□□□ 0.51
FN1-208ENST00000426059 TTC27Q6P3X3 843 aa18.23■□□□□ 0.51
FN1-208ENST00000426059 FAM35AQ86V20 835 aa18.23■□□□□ 0.51
FN1-208ENST00000426059 METTL23Q86XA0 190 aa18.23■□□□□ 0.51
FN1-208ENST00000426059 FNIP1Q8TF40 1166 aa18.23■□□□□ 0.51
FN1-208ENST00000426059 C1orf54Q8WWF1 131 aa18.23■□□□□ 0.51
FN1-208ENST00000426059 ATG4AQ8WYN0 398 aa18.23■□□□□ 0.51
FN1-208ENST00000426059 SUSD3Q96L08 255 aa18.23■□□□□ 0.51
FN1-208ENST00000426059 DNAI2Q9GZS0 605 aa18.23■□□□□ 0.51
FN1-208ENST00000426059 NRDE2Q9H7Z3 1164 aa18.23■□□□□ 0.51
FN1-208ENST00000426059 CDH9Q9ULB4 789 aa18.23■□□□□ 0.51
FN1-208ENST00000426059 GOLGA6L10A0A0M3HER8 536 aa18.23■□□□□ 0.51
FN1-208ENST00000426059 NT5C1B-RDH14C9J2C7 533 aa18.23■□□□□ 0.51
FN1-208ENST00000426059 XPO1O14980 1071 aaKnown RBP18.23■□□□□ 0.51
FN1-208ENST00000426059 OR4Q2P0C623 313 aa18.23■□□□□ 0.51
FN1-208ENST00000426059 MIPP30301 263 aa18.23■□□□□ 0.51
FN1-208ENST00000426059 KCNJ1P48048 391 aa18.23■□□□□ 0.51
FN1-208ENST00000426059 ZNF143P52747 638 aaPredicted RBP18.23■□□□□ 0.51
FN1-208ENST00000426059 CCDC14Q49A88 953 aa18.23■□□□□ 0.51
FN1-208ENST00000426059 GLE1Q53GS7 698 aaKnown RBP18.23■□□□□ 0.51
FN1-208ENST00000426059 MFSD7Q6UXD7 560 aa18.23■□□□□ 0.51
FN1-208ENST00000426059 CCNI2Q6ZMN8 369 aaPredicted RBP18.23■□□□□ 0.51
FN1-208ENST00000426059 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.23■□□□□ 0.516e-66■■■■□ 19.5
FN1-208ENST00000426059 MYCBPAPQ8TBZ2 947 aa18.23■□□□□ 0.51
FN1-208ENST00000426059 IFT81Q8WYA0 676 aa18.23■□□□□ 0.51
FN1-208ENST00000426059 MAGOHBQ96A72 148 aaKnown RBP18.23■□□□□ 0.51
FN1-208ENST00000426059 B3GALT6Q96L58 329 aa18.23■□□□□ 0.51
FN1-208ENST00000426059 SMOQ99835 787 aa18.23■□□□□ 0.51
FN1-208ENST00000426059 TRIM51Q9BSJ1 452 aa18.23■□□□□ 0.51
FN1-208ENST00000426059 TMEM39AQ9NV64 488 aa18.23■□□□□ 0.51
FN1-208ENST00000426059 CYP11A1P05108 521 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms