RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 GOLGA8IPA6NC78 632 aa13.09□□□□□ -0.31
HLA-DQB3-203ENST00000425319 C2orf78A6NCI8 922 aa13.09□□□□□ -0.31
HLA-DQB3-203ENST00000425319 GOLGA8JA6NMD2 632 aa13.09□□□□□ -0.31
HLA-DQB3-203ENST00000425319 TISP43B9A030 160 aa13.09□□□□□ -0.31
HLA-DQB3-203ENST00000425319 H0Y626 953 aa13.09□□□□□ -0.31
HLA-DQB3-203ENST00000425319 LEFTY2O00292 366 aa13.09□□□□□ -0.31
HLA-DQB3-203ENST00000425319 TNFRSF10BO14763 440 aa13.09□□□□□ -0.31
HLA-DQB3-203ENST00000425319 AP5Z1O43299 807 aa13.09□□□□□ -0.31
HLA-DQB3-203ENST00000425319 RTN3O95197 1032 aaPredicted RBP13.09□□□□□ -0.31
HLA-DQB3-203ENST00000425319 TRIM16O95361 564 aa13.09□□□□□ -0.31
HLA-DQB3-203ENST00000425319 PDGFRBP09619 1106 aa13.09□□□□□ -0.31
HLA-DQB3-203ENST00000425319 TNNI1P19237 187 aa13.09□□□□□ -0.31
HLA-DQB3-203ENST00000425319 BDNFP23560 247 aa13.09□□□□□ -0.31
HLA-DQB3-203ENST00000425319 ADSSP30520 456 aa13.09□□□□□ -0.31
HLA-DQB3-203ENST00000425319 GRIA2P42262 883 aa13.09□□□□□ -0.31
HLA-DQB3-203ENST00000425319 TNNC1P63316 161 aa13.09□□□□□ -0.31
HLA-DQB3-203ENST00000425319 RESTQ13127 1097 aa13.09□□□□□ -0.31
HLA-DQB3-203ENST00000425319 SOWAHAQ2M3V2 549 aa13.09□□□□□ -0.31
HLA-DQB3-203ENST00000425319 TRIM61Q5EBN2 209 aa13.09□□□□□ -0.31
HLA-DQB3-203ENST00000425319 TCEAL6Q6IPX3 200 aa13.09□□□□□ -0.31
HLA-DQB3-203ENST00000425319 RASSF3Q86WH2 238 aa13.09□□□□□ -0.31
HLA-DQB3-203ENST00000425319 SYT12Q8IV01 421 aa13.09□□□□□ -0.31
HLA-DQB3-203ENST00000425319 OR6B3Q8NGW1 331 aa13.09□□□□□ -0.31
HLA-DQB3-203ENST00000425319 TCEAL3Q969E4 200 aa13.09□□□□□ -0.31
HLA-DQB3-203ENST00000425319 OTUB2Q96DC9 234 aa13.09□□□□□ -0.31
HLA-DQB3-203ENST00000425319 EPSTI1Q96J88 318 aa13.09□□□□□ -0.31
HLA-DQB3-203ENST00000425319 DNAI2Q9GZS0 605 aa13.09□□□□□ -0.31
HLA-DQB3-203ENST00000425319 NACA2Q9H009 215 aa13.09□□□□□ -0.31
HLA-DQB3-203ENST00000425319 PCIF1Q9H4Z3 704 aa13.09□□□□□ -0.31
HLA-DQB3-203ENST00000425319 PDE11AQ9HCR9 933 aa13.09□□□□□ -0.31
HLA-DQB3-203ENST00000425319 INTS13Q9NVM9 706 aa13.09□□□□□ -0.31
HLA-DQB3-203ENST00000425319 GCNT4Q9P109 453 aa13.09□□□□□ -0.31
HLA-DQB3-203ENST00000425319 EVLQ9UI08 416 aaPredicted RBP13.09□□□□□ -0.31
HLA-DQB3-203ENST00000425319 SH3BP1Q9Y3L3 701 aa13.09□□□□□ -0.31
HLA-DQB3-203ENST00000425319 SRPRBQ9Y5M8 271 aaKnown RBP13.09□□□□□ -0.31
HLA-DQB3-203ENST00000425319 LNP1A1A4G5 178 aa13.08□□□□□ -0.32
HLA-DQB3-203ENST00000425319 TBC1D3BA6NDS4 549 aa13.08□□□□□ -0.32
HLA-DQB3-203ENST00000425319 PHACTR2O75167 634 aa13.08□□□□□ -0.32
HLA-DQB3-203ENST00000425319 KAT7O95251 611 aa13.08□□□□□ -0.32
HLA-DQB3-203ENST00000425319 KLF8O95600 359 aaPredicted RBP13.08□□□□□ -0.32
HLA-DQB3-203ENST00000425319 MBL2P11226 248 aaPredicted RBP13.08□□□□□ -0.32
HLA-DQB3-203ENST00000425319 WARSP23381 471 aaKnown RBP13.08□□□□□ -0.32
HLA-DQB3-203ENST00000425319 HOXD12P35452 270 aa13.08□□□□□ -0.32
HLA-DQB3-203ENST00000425319 TIE1P35590 1138 aa13.08□□□□□ -0.32
HLA-DQB3-203ENST00000425319 IRX4P78413 519 aa13.08□□□□□ -0.32
HLA-DQB3-203ENST00000425319 SLC7A9P82251 487 aa13.08□□□□□ -0.32
HLA-DQB3-203ENST00000425319 GFPT1Q06210 699 aaPredicted RBP13.08□□□□□ -0.32
HLA-DQB3-203ENST00000425319 E2F5Q15329 346 aa13.08□□□□□ -0.32
HLA-DQB3-203ENST00000425319 DHCR24Q15392 516 aa13.08□□□□□ -0.32
HLA-DQB3-203ENST00000425319 DUOXA1Q1HG43 343 aa13.08□□□□□ -0.32
HLA-DQB3-203ENST00000425319 FILIP1Q7Z7B0 1213 aa13.08□□□□□ -0.32
HLA-DQB3-203ENST00000425319 TXNDC5Q8NBS9 432 aaKnown RBP13.08□□□□□ -0.32
HLA-DQB3-203ENST00000425319 MYCBPAPQ8TBZ2 947 aa13.08□□□□□ -0.32
HLA-DQB3-203ENST00000425319 LRRC15Q8TF66 581 aa13.08□□□□□ -0.32
HLA-DQB3-203ENST00000425319 C8orf48Q96LL4 319 aa13.08□□□□□ -0.32
HLA-DQB3-203ENST00000425319 KIF2CQ99661 725 aa13.08□□□□□ -0.32
HLA-DQB3-203ENST00000425319 MTMR12Q9C0I1 747 aa13.08□□□□□ -0.32
HLA-DQB3-203ENST00000425319 ELOVL4Q9GZR5 314 aa13.08□□□□□ -0.32
HLA-DQB3-203ENST00000425319 ARHGEF4Q9NR80 690 aa13.08□□□□□ -0.32
HLA-DQB3-203ENST00000425319 NCOR2Q9Y618 2525 aa13.08□□□□□ -0.32
HLA-DQB3-203ENST00000425319 E2F8A0AVK6 867 aa13.07□□□□□ -0.32
HLA-DQB3-203ENST00000425319 ZNF840PA6NDX5 716 aa13.07□□□□□ -0.32
HLA-DQB3-203ENST00000425319 K7EQS6 105 aa13.07□□□□□ -0.32
HLA-DQB3-203ENST00000425319 ZNF217O75362 1048 aa13.07□□□□□ -0.32
HLA-DQB3-203ENST00000425319 PPP1R37O75864 691 aa13.07□□□□□ -0.32
HLA-DQB3-203ENST00000425319 SYPP08247 313 aa13.07□□□□□ -0.32
HLA-DQB3-203ENST00000425319 YWHAQP27348 245 aa13.07□□□□□ -0.32
HLA-DQB3-203ENST00000425319 HOXC13P31276 330 aa13.07□□□□□ -0.32
HLA-DQB3-203ENST00000425319 SNRPFP62306 86 aaKnown RBP13.07□□□□□ -0.32
HLA-DQB3-203ENST00000425319 NOP14P78316 857 aaKnown RBP13.07□□□□□ -0.32
HLA-DQB3-203ENST00000425319 GOLGA8FQ08AF8 430 aa13.07□□□□□ -0.32
HLA-DQB3-203ENST00000425319 GOLGA8DPQ0D2H9 430 aa13.07□□□□□ -0.32
HLA-DQB3-203ENST00000425319 LYSMD4Q5XG99 296 aa13.07□□□□□ -0.32
HLA-DQB3-203ENST00000425319 WDR49Q8IV35 697 aa13.07□□□□□ -0.32
HLA-DQB3-203ENST00000425319 NUP93Q8N1F7 819 aa13.07□□□□□ -0.32
HLA-DQB3-203ENST00000425319 OVCA2Q8WZ82 227 aa13.07□□□□□ -0.32
HLA-DQB3-203ENST00000425319 MYLPFQ96A32 169 aa13.07□□□□□ -0.32
HLA-DQB3-203ENST00000425319 XPO6Q96QU8 1125 aaKnown RBP13.07□□□□□ -0.32
HLA-DQB3-203ENST00000425319 SLC22A12Q96S37 553 aa13.07□□□□□ -0.32
HLA-DQB3-203ENST00000425319 STRA6Q9BX79 667 aa13.07□□□□□ -0.32
HLA-DQB3-203ENST00000425319 ADAM33Q9BZ11 813 aa13.07□□□□□ -0.32
HLA-DQB3-203ENST00000425319 DEC1Q9P2X7 70 aa13.07□□□□□ -0.32
HLA-DQB3-203ENST00000425319 ZMIZ1Q9ULJ6 1067 aa13.07□□□□□ -0.32
HLA-DQB3-203ENST00000425319 SLC6A14Q9UN76 642 aa13.07□□□□□ -0.32
HLA-DQB3-203ENST00000425319 PCDHB9Q9Y5E1 797 aa13.07□□□□□ -0.32
HLA-DQB3-203ENST00000425319 CPQQ9Y646 472 aa13.07□□□□□ -0.32
HLA-DQB3-203ENST00000425319 DCHS1Q96JQ0 3298 aa13.07□□□□□ -0.32
HLA-DQB3-203ENST00000425319 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.06□□□□□ -0.32
HLA-DQB3-203ENST00000425319 A8MXQ7 604 aa13.06□□□□□ -0.32
HLA-DQB3-203ENST00000425319 TACC1O75410 805 aa13.06□□□□□ -0.32
HLA-DQB3-203ENST00000425319 CFIP05156 583 aa13.06□□□□□ -0.32
HLA-DQB3-203ENST00000425319 ADH5P11766 374 aa13.06□□□□□ -0.32
HLA-DQB3-203ENST00000425319 OPRD1P41143 372 aa13.06□□□□□ -0.32
HLA-DQB3-203ENST00000425319 P2RY2P41231 377 aa13.06□□□□□ -0.32
HLA-DQB3-203ENST00000425319 PSMC1P62191 440 aaKnown RBP13.06□□□□□ -0.32
HLA-DQB3-203ENST00000425319 IFRD2Q12894 506 aaPredicted RBP13.06□□□□□ -0.32
HLA-DQB3-203ENST00000425319 WDR72Q3MJ13 1102 aa13.06□□□□□ -0.32
HLA-DQB3-203ENST00000425319 MDH1BQ5I0G3 518 aa13.06□□□□□ -0.32
HLA-DQB3-203ENST00000425319 SYCP2LQ5T4T6 812 aa13.06□□□□□ -0.32
HLA-DQB3-203ENST00000425319 OSTM1Q86WC4 334 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms