RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 TTLL2Q9BWV7 592 aa17.26■□□□□ 0.35
DDR1-234ENST00000424544 EBF3Q9H4W6 596 aa17.26■□□□□ 0.35
DDR1-234ENST00000424544 R3HCC1Q9Y3T6 440 aaKnown RBP17.26■□□□□ 0.35
DDR1-234ENST00000424544 USP17L7P0C7H9 530 aa17.25■□□□□ 0.35
DDR1-234ENST00000424544 ARSAP15289 507 aa17.25■□□□□ 0.35
DDR1-234ENST00000424544 PFKLP17858 780 aa17.25■□□□□ 0.35
DDR1-234ENST00000424544 BDNFP23560 247 aa17.25■□□□□ 0.35
DDR1-234ENST00000424544 HOXC13P31276 330 aa17.25■□□□□ 0.35
DDR1-234ENST00000424544 PDGFRLQ15198 375 aa17.25■□□□□ 0.35
DDR1-234ENST00000424544 SCN4BQ8IWT1 228 aa17.25■□□□□ 0.35
DDR1-234ENST00000424544 OSCP1Q8WVF1 389 aa17.25■□□□□ 0.35
DDR1-234ENST00000424544 C8orf48Q96LL4 319 aa17.25■□□□□ 0.35
DDR1-234ENST00000424544 MMS19Q96T76 1030 aa17.25■□□□□ 0.35
DDR1-234ENST00000424544 KCTD10Q9H3F6 313 aa17.25■□□□□ 0.35
DDR1-234ENST00000424544 CLSTN2Q9H4D0 955 aa17.25■□□□□ 0.35
DDR1-234ENST00000424544 TMEM30AQ9NV96 361 aa17.25■□□□□ 0.35
DDR1-234ENST00000424544 ZNF638Q14966 1978 aaKnown RBP17.25■□□□□ 0.35
DDR1-234ENST00000424544 PTPRDP23468 1912 aa17.25■□□□□ 0.35
DDR1-234ENST00000424544 C2orf78A6NCI8 922 aa17.24■□□□□ 0.35
DDR1-234ENST00000424544 PTPN1P18031 435 aaKnown RBP17.24■□□□□ 0.35
DDR1-234ENST00000424544 ATICP31939 592 aa17.24■□□□□ 0.35
DDR1-234ENST00000424544 CNR2P34972 360 aa17.24■□□□□ 0.35
DDR1-234ENST00000424544 GJA4P35212 333 aa17.24■□□□□ 0.35
DDR1-234ENST00000424544 GRIK1P39086 918 aa17.24■□□□□ 0.35
DDR1-234ENST00000424544 CASP4P49662 377 aa17.24■□□□□ 0.35
DDR1-234ENST00000424544 GALK1P51570 392 aa17.24■□□□□ 0.35
DDR1-234ENST00000424544 MYL6P60660 151 aa17.24■□□□□ 0.35
DDR1-234ENST00000424544 NOP14P78316 857 aaKnown RBP17.24■□□□□ 0.35
DDR1-234ENST00000424544 PSMD2Q13200 908 aa17.24■□□□□ 0.35
DDR1-234ENST00000424544 PUM1Q14671 1186 aaKnown RBP eCLIP17.24■□□□□ 0.35
DDR1-234ENST00000424544 MTF1Q14872 753 aa17.24■□□□□ 0.35
DDR1-234ENST00000424544 CAMK4Q16566 473 aa17.24■□□□□ 0.35
DDR1-234ENST00000424544 PKN3Q6P5Z2 889 aa17.24■□□□□ 0.35
DDR1-234ENST00000424544 DENND5BQ6ZUT9 1274 aa17.24■□□□□ 0.35
DDR1-234ENST00000424544 LONP2Q86WA8 852 aa17.24■□□□□ 0.35
DDR1-234ENST00000424544 ARL14EPQ8N8R7 260 aaPredicted RBP17.24■□□□□ 0.35
DDR1-234ENST00000424544 GOLGA5Q8TBA6 731 aa17.24■□□□□ 0.35
DDR1-234ENST00000424544 SYAP1Q96A49 352 aaPredicted RBP17.24■□□□□ 0.35
DDR1-234ENST00000424544 NUP62CLQ9H1M0 184 aa17.24■□□□□ 0.35
DDR1-234ENST00000424544 ECT2Q9H8V3 914 aa17.24■□□□□ 0.35
DDR1-234ENST00000424544 ARHGAP26Q9UNA1 814 aa17.24■□□□□ 0.35
DDR1-234ENST00000424544 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.23■□□□□ 0.35
DDR1-234ENST00000424544 TRAV19A0A0A6YYK7 116 aa17.23■□□□□ 0.35
DDR1-234ENST00000424544 ZNF840PA6NDX5 716 aa17.23■□□□□ 0.35
DDR1-234ENST00000424544 CHURC1-FNTBB4DL54 471 aa17.23■□□□□ 0.35
DDR1-234ENST00000424544 EXOC3O60645 756 aa17.23■□□□□ 0.35
DDR1-234ENST00000424544 OLFM2O95897 454 aa17.23■□□□□ 0.35
DDR1-234ENST00000424544 MYL1P05976 194 aa17.23■□□□□ 0.35
DDR1-234ENST00000424544 HDCP19113 662 aa17.23■□□□□ 0.35
DDR1-234ENST00000424544 FNTBP49356 437 aa17.23■□□□□ 0.35
DDR1-234ENST00000424544 AP3M2P53677 418 aa17.23■□□□□ 0.35
DDR1-234ENST00000424544 CACNA2D1P54289 1103 aa17.23■□□□□ 0.35
DDR1-234ENST00000424544 MCCD1P59942 119 aaPredicted RBP17.23■□□□□ 0.35
DDR1-234ENST00000424544 USP4Q13107 963 aa17.23■□□□□ 0.35
DDR1-234ENST00000424544 EML3Q32P44 896 aa17.23■□□□□ 0.35
DDR1-234ENST00000424544 KMT5BQ4FZB7 885 aa17.23■□□□□ 0.35
DDR1-234ENST00000424544 KIAA1958Q8N8K9 716 aa17.23■□□□□ 0.35
DDR1-234ENST00000424544 EZH1Q92800 747 aaPredicted RBP17.23■□□□□ 0.35
DDR1-234ENST00000424544 LINC00597Q9H2U6 94 aa17.23■□□□□ 0.35
DDR1-234ENST00000424544 DPEP3Q9H4B8 488 aa17.23■□□□□ 0.35
DDR1-234ENST00000424544 PARD6AQ9NPB6 346 aa17.23■□□□□ 0.35
DDR1-234ENST00000424544 NCDNQ9UBB6 729 aa17.23■□□□□ 0.35
DDR1-234ENST00000424544 CCDC163A0A0D9SF12 145 aa17.22■□□□□ 0.35
DDR1-234ENST00000424544 F8VP50 259 aa17.22■□□□□ 0.35
DDR1-234ENST00000424544 PDXKO00764 312 aa17.22■□□□□ 0.35
DDR1-234ENST00000424544 TRIM66O15016 1216 aa17.22■□□□□ 0.35
DDR1-234ENST00000424544 VNN1O95497 513 aa17.22■□□□□ 0.35
DDR1-234ENST00000424544 DRD1P21728 446 aa17.22■□□□□ 0.35
DDR1-234ENST00000424544 PPP3CCP48454 512 aa17.22■□□□□ 0.35
DDR1-234ENST00000424544 SLC7A9P82251 487 aa17.22■□□□□ 0.35
DDR1-234ENST00000424544 AMPD2Q01433 879 aa17.22■□□□□ 0.35
DDR1-234ENST00000424544 CYP27A1Q02318 531 aa17.22■□□□□ 0.35
DDR1-234ENST00000424544 GRSF1Q12849 480 aaKnown RBP eCLIP17.22■□□□□ 0.35
DDR1-234ENST00000424544 MDH1BQ5I0G3 518 aa17.22■□□□□ 0.35
DDR1-234ENST00000424544 CCDC183Q5T5S1 534 aa17.22■□□□□ 0.35
DDR1-234ENST00000424544 TDRD10Q5VZ19 366 aaKnown RBP17.22■□□□□ 0.35
DDR1-234ENST00000424544 CAVIN1Q6NZI2 390 aaKnown RBP17.22■□□□□ 0.35
DDR1-234ENST00000424544 CC2D1AQ6P1N0 951 aaPredicted RBP17.22■□□□□ 0.35
DDR1-234ENST00000424544 PAQR9Q6ZVX9 377 aa17.22■□□□□ 0.35
DDR1-234ENST00000424544 OR6B3Q8NGW1 331 aa17.22■□□□□ 0.35
DDR1-234ENST00000424544 HINFPQ9BQA5 517 aa17.22■□□□□ 0.35
DDR1-234ENST00000424544 B3GNT5Q9BYG0 378 aa17.22■□□□□ 0.35
DDR1-234ENST00000424544 RNF38Q9H0F5 515 aa17.22■□□□□ 0.35
DDR1-234ENST00000424544 DUS2Q9NX74 493 aaKnown RBP17.22■□□□□ 0.35
DDR1-234ENST00000424544 IL37Q9NZH6 218 aa17.22■□□□□ 0.35
DDR1-234ENST00000424544 TMEM63CQ9P1W3 806 aa17.22■□□□□ 0.35
DDR1-234ENST00000424544 ATG2BQ96BY7 2078 aa17.22■□□□□ 0.35
DDR1-234ENST00000424544 LRRIQ3A6PVS8 624 aaPredicted RBP17.21■□□□□ 0.35
DDR1-234ENST00000424544 EGFP01133 1207 aa17.21■□□□□ 0.35
DDR1-234ENST00000424544 CKMP06732 381 aa17.21■□□□□ 0.35
DDR1-234ENST00000424544 CDH8P55286 799 aa17.21■□□□□ 0.35
DDR1-234ENST00000424544 TRPC3Q13507 836 aa17.21■□□□□ 0.35
DDR1-234ENST00000424544 PNOCQ13519 176 aa17.21■□□□□ 0.35
DDR1-234ENST00000424544 C1orf220Q5T0J3 134 aa17.21■□□□□ 0.35
DDR1-234ENST00000424544 NAIF1Q69YI7 327 aaPredicted RBP17.21■□□□□ 0.35
DDR1-234ENST00000424544 LAIR1Q6GTX8 287 aa17.21■□□□□ 0.35
DDR1-234ENST00000424544 SH3RF2Q8TEC5 729 aa17.21■□□□□ 0.35
DDR1-234ENST00000424544 SECISBP2LQ93073 1101 aaKnown RBP17.21■□□□□ 0.35
DDR1-234ENST00000424544 SNX25Q9H3E2 840 aa17.21■□□□□ 0.35
DDR1-234ENST00000424544 TRPC7Q9HCX4 862 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms