RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 FMO5P49326 533 aa11.62□□□□□ -0.55
USP49-204ENST00000423567 PDE6CP51160 858 aa11.62□□□□□ -0.55
USP49-204ENST00000423567 PRKCQQ04759 706 aa11.62□□□□□ -0.55
USP49-204ENST00000423567 INCA1Q0VD86 236 aa11.62□□□□□ -0.55
USP49-204ENST00000423567 ORC1Q13415 861 aa11.62□□□□□ -0.55
USP49-204ENST00000423567 CBWD6Q4V339 395 aa11.62□□□□□ -0.55
USP49-204ENST00000423567 CBWD3Q5JTY5 395 aa11.62□□□□□ -0.55
USP49-204ENST00000423567 CBWD5Q5RIA9 395 aa11.62□□□□□ -0.55
USP49-204ENST00000423567 FAM35AQ86V20 835 aa11.62□□□□□ -0.55
USP49-204ENST00000423567 CREBRFQ8IUR6 639 aa11.62□□□□□ -0.55
USP49-204ENST00000423567 MFSD6LQ8IWD5 586 aa11.62□□□□□ -0.55
USP49-204ENST00000423567 CMTM8Q8IZV2 173 aa11.62□□□□□ -0.55
USP49-204ENST00000423567 CRYBG2Q8N1P7 616 aa11.62□□□□□ -0.55
USP49-204ENST00000423567 MAB21L3Q8N8X9 362 aa11.62□□□□□ -0.55
USP49-204ENST00000423567 SEMA4DQ92854 862 aa11.62□□□□□ -0.55
USP49-204ENST00000423567 DNASE1L2Q92874 299 aa11.62□□□□□ -0.55
USP49-204ENST00000423567 SLITRK1Q96PX8 696 aa11.62□□□□□ -0.55
USP49-204ENST00000423567 KRTAP3-3Q9BYR6 98 aa11.62□□□□□ -0.55
USP49-204ENST00000423567 KRTAP3-2Q9BYR7 98 aa11.62□□□□□ -0.55
USP49-204ENST00000423567 PLA2G2FQ9BZM2 168 aa11.62□□□□□ -0.55
USP49-204ENST00000423567 KCNH6Q9H252 994 aa11.62□□□□□ -0.55
USP49-204ENST00000423567 TRPC7Q9HCX4 862 aa11.62□□□□□ -0.55
USP49-204ENST00000423567 DMAP1Q9NPF5 467 aaPredicted RBP11.62□□□□□ -0.55
USP49-204ENST00000423567 KRT82Q9NSB4 513 aa11.62□□□□□ -0.55
USP49-204ENST00000423567 THG1LQ9NWX6 298 aaKnown RBP11.62□□□□□ -0.55
USP49-204ENST00000423567 OBP2AQ9NY56 170 aa11.62□□□□□ -0.55
USP49-204ENST00000423567 TRPM5Q9NZQ8 1165 aa11.62□□□□□ -0.55
USP49-204ENST00000423567 COQ4Q9Y3A0 265 aa11.62□□□□□ -0.55
USP49-204ENST00000423567 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.62□□□□□ -0.55
USP49-204ENST00000423567 TECTAO75443 2155 aa11.62□□□□□ -0.55
USP49-204ENST00000423567 DOCK8Q8NF50 2099 aa11.61□□□□□ -0.55
USP49-204ENST00000423567 CLDN5O00501 218 aa11.61□□□□□ -0.55
USP49-204ENST00000423567 NRG2O14511 850 aaPredicted RBP11.61□□□□□ -0.55
USP49-204ENST00000423567 P4HA2O15460 535 aa11.61□□□□□ -0.55
USP49-204ENST00000423567 CILPO75339 1184 aa11.61□□□□□ -0.55
USP49-204ENST00000423567 AP1G2O75843 785 aa11.61□□□□□ -0.55
USP49-204ENST00000423567 RTN3O95197 1032 aaPredicted RBP11.61□□□□□ -0.55
USP49-204ENST00000423567 FAM200BP0CF97 657 aa11.61□□□□□ -0.55
USP49-204ENST00000423567 CCDC130P13994 396 aa11.61□□□□□ -0.55
USP49-204ENST00000423567 TBXAS1P24557 533 aaPredicted RBP11.61□□□□□ -0.55
USP49-204ENST00000423567 ADORA2BP29275 332 aa11.61□□□□□ -0.55
USP49-204ENST00000423567 PPP3CCP48454 512 aa11.61□□□□□ -0.55
USP49-204ENST00000423567 CLCN5P51795 746 aa11.61□□□□□ -0.55
USP49-204ENST00000423567 IFRD2Q12894 506 aaPredicted RBP11.61□□□□□ -0.55
USP49-204ENST00000423567 MLF2Q15773 248 aaPredicted RBP11.61□□□□□ -0.55
USP49-204ENST00000423567 SLC44A4Q53GD3 710 aa11.61□□□□□ -0.55
USP49-204ENST00000423567 TXNDC8Q6A555 127 aa11.61□□□□□ -0.55
USP49-204ENST00000423567 VITQ6UXI7 678 aa11.61□□□□□ -0.55
USP49-204ENST00000423567 MON1AQ86VX9 555 aa11.61□□□□□ -0.55
USP49-204ENST00000423567 NUP93Q8N1F7 819 aa11.61□□□□□ -0.55
USP49-204ENST00000423567 CELF5Q8N6W0 485 aaKnown RBP11.61□□□□□ -0.55
USP49-204ENST00000423567 SLC2A14Q8TDB8 520 aa11.61□□□□□ -0.55
USP49-204ENST00000423567 CSGALNACT1Q8TDX6 532 aa11.61□□□□□ -0.55
USP49-204ENST00000423567 NT5C1BQ96P26 610 aa11.61□□□□□ -0.55
USP49-204ENST00000423567 SLC46A2Q9BY10 475 aa11.61□□□□□ -0.55
USP49-204ENST00000423567 TBC1D17Q9HA65 648 aa11.61□□□□□ -0.55
USP49-204ENST00000423567 KIF9Q9HAQ2 790 aa11.61□□□□□ -0.55
USP49-204ENST00000423567 FAM49BQ9NUQ9 324 aa11.61□□□□□ -0.55
USP49-204ENST00000423567 HMGXB4Q9UGU5 601 aa11.61□□□□□ -0.55
USP49-204ENST00000423567 DOCK6Q96HP0 2047 aa11.6□□□□□ -0.55
USP49-204ENST00000423567 NOTCH4Q99466 2003 aa11.6□□□□□ -0.55
USP49-204ENST00000423567 MYO10Q9HD67 2058 aa11.6□□□□□ -0.55
USP49-204ENST00000423567 TRAV19A0A0A6YYK7 116 aa11.6□□□□□ -0.55
USP49-204ENST00000423567 KRBA1A5PL33 1030 aa11.6□□□□□ -0.55
USP49-204ENST00000423567 PMM2O15305 246 aa11.6□□□□□ -0.55
USP49-204ENST00000423567 CHADO15335 359 aa11.6□□□□□ -0.55
USP49-204ENST00000423567 LRRN2O75325 713 aa11.6□□□□□ -0.55
USP49-204ENST00000423567 MBD3O95983 291 aa11.6□□□□□ -0.55
USP49-204ENST00000423567 AFPP02771 609 aaKnown RBP11.6□□□□□ -0.55
USP49-204ENST00000423567 CKMP06732 381 aa11.6□□□□□ -0.55
USP49-204ENST00000423567 USP17L7P0C7H9 530 aa11.6□□□□□ -0.55
USP49-204ENST00000423567 AOC1P19801 751 aa11.6□□□□□ -0.55
USP49-204ENST00000423567 YWHAQP27348 245 aa11.6□□□□□ -0.55
USP49-204ENST00000423567 VCPP55072 806 aaKnown RBP11.6□□□□□ -0.55
USP49-204ENST00000423567 MARSP56192 900 aaKnown RBP11.6□□□□□ -0.55
USP49-204ENST00000423567 PLCB2Q00722 1185 aa11.6□□□□□ -0.55
USP49-204ENST00000423567 LRMPQ12912 555 aa11.6□□□□□ -0.55
USP49-204ENST00000423567 CUL2Q13617 745 aa11.6□□□□□ -0.55
USP49-204ENST00000423567 ARHGAP29Q52LW3 1261 aa11.6□□□□□ -0.55
USP49-204ENST00000423567 ZNF394Q53GI3 561 aa11.6□□□□□ -0.55
USP49-204ENST00000423567 PHLDB3Q6NSJ2 640 aa11.6□□□□□ -0.55
USP49-204ENST00000423567 CC2D1AQ6P1N0 951 aaPredicted RBP11.6□□□□□ -0.55
USP49-204ENST00000423567 TMEM150AQ86TG1 271 aa11.6□□□□□ -0.55
USP49-204ENST00000423567 GPIHBP1Q8IV16 184 aa11.6□□□□□ -0.55
USP49-204ENST00000423567 FAM114A1Q8IWE2 563 aa11.6□□□□□ -0.55
USP49-204ENST00000423567 TRIM59Q8IWR1 403 aa11.6□□□□□ -0.55
USP49-204ENST00000423567 FUKQ8N0W3 1084 aa11.6□□□□□ -0.55
USP49-204ENST00000423567 C12orf29Q8N999 325 aa11.6□□□□□ -0.55
USP49-204ENST00000423567 PDZD8Q8NEN9 1154 aa11.6□□□□□ -0.55
USP49-204ENST00000423567 BPIFB1Q8TDL5 484 aa11.6□□□□□ -0.55
USP49-204ENST00000423567 TATDN2Q93075 761 aa11.6□□□□□ -0.55
USP49-204ENST00000423567 CYFIP2Q96F07 1278 aa11.6□□□□□ -0.55
USP49-204ENST00000423567 HEXIM2Q96MH2 286 aaKnown RBP11.6□□□□□ -0.55
USP49-204ENST00000423567 TWNKQ96RR1 684 aa11.6□□□□□ -0.55
USP49-204ENST00000423567 HNRNPABQ99729 332 aaKnown RBP11.6□□□□□ -0.55
USP49-204ENST00000423567 TTLL2Q9BWV7 592 aa11.6□□□□□ -0.55
USP49-204ENST00000423567 CISHQ9NSE2 258 aa11.6□□□□□ -0.55
USP49-204ENST00000423567 COMMD8Q9NX08 183 aa11.6□□□□□ -0.55
USP49-204ENST00000423567 MRPS17Q9Y2R5 130 aaKnown RBP11.6□□□□□ -0.55
USP49-204ENST00000423567 ARIH1Q9Y4X5 557 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 167.2 ms