RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 ACTN4O43707 911 aaKnown RBP12.32□□□□□ -0.44
SQSTM1-203ENST00000422245 DRD1P21728 446 aa12.32□□□□□ -0.44
SQSTM1-203ENST00000422245 PPP3CCP48454 512 aa12.32□□□□□ -0.44
SQSTM1-203ENST00000422245 NOP14P78316 857 aaKnown RBP12.32□□□□□ -0.44
SQSTM1-203ENST00000422245 DNM1Q05193 864 aaKnown RBP12.32□□□□□ -0.44
SQSTM1-203ENST00000422245 PKP1Q13835 747 aa12.32□□□□□ -0.44
SQSTM1-203ENST00000422245 HEATR6Q6AI08 1181 aaKnown RBP12.32□□□□□ -0.44
SQSTM1-203ENST00000422245 WDR5BQ86VZ2 330 aa12.32□□□□□ -0.44
SQSTM1-203ENST00000422245 KIAA1958Q8N8K9 716 aa12.32□□□□□ -0.44
SQSTM1-203ENST00000422245 ARL14EPQ8N8R7 260 aaPredicted RBP12.32□□□□□ -0.44
SQSTM1-203ENST00000422245 SH3RF2Q8TEC5 729 aa12.32□□□□□ -0.44
SQSTM1-203ENST00000422245 SLC22A12Q96S37 553 aa12.32□□□□□ -0.44
SQSTM1-203ENST00000422245 XYLT2Q9H1B5 865 aa12.32□□□□□ -0.44
SQSTM1-203ENST00000422245 ECT2Q9H8V3 914 aa12.32□□□□□ -0.44
SQSTM1-203ENST00000422245 VRTNQ9H8Y1 702 aa12.32□□□□□ -0.44
SQSTM1-203ENST00000422245 C2orf42Q9NWW7 574 aa12.32□□□□□ -0.44
SQSTM1-203ENST00000422245 USP25Q9UHP3 1055 aa12.32□□□□□ -0.44
SQSTM1-203ENST00000422245 RCOR1Q9UKL0 485 aa12.32□□□□□ -0.44
SQSTM1-203ENST00000422245 CDV3Q9UKY7 258 aaKnown RBP12.32□□□□□ -0.44
SQSTM1-203ENST00000422245 WNT6Q9Y6F9 365 aa12.32□□□□□ -0.44
SQSTM1-203ENST00000422245 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.31□□□□□ -0.44
SQSTM1-203ENST00000422245 A8MXQ7 604 aa12.31□□□□□ -0.44
SQSTM1-203ENST00000422245 F8VP50 259 aa12.31□□□□□ -0.44
SQSTM1-203ENST00000422245 HRO43593 1189 aa12.31□□□□□ -0.44
SQSTM1-203ENST00000422245 FOXD2O60548 495 aaPredicted RBP12.31□□□□□ -0.44
SQSTM1-203ENST00000422245 RNF40O75150 1001 aa12.31□□□□□ -0.44
SQSTM1-203ENST00000422245 PHACTR2O75167 634 aa12.31□□□□□ -0.44
SQSTM1-203ENST00000422245 CLSTN1O94985 981 aa12.31□□□□□ -0.44
SQSTM1-203ENST00000422245 NFATC1O95644 943 aa12.31□□□□□ -0.44
SQSTM1-203ENST00000422245 CST3P01034 146 aaPredicted RBP12.31□□□□□ -0.44
SQSTM1-203ENST00000422245 MYL1P05976 194 aa12.31□□□□□ -0.44
SQSTM1-203ENST00000422245 PTPN1P18031 435 aaKnown RBP12.31□□□□□ -0.44
SQSTM1-203ENST00000422245 HDCP19113 662 aa12.31□□□□□ -0.44
SQSTM1-203ENST00000422245 TGM1P22735 817 aa12.31□□□□□ -0.44
SQSTM1-203ENST00000422245 GJA4P35212 333 aa12.31□□□□□ -0.44
SQSTM1-203ENST00000422245 MYL6P60660 151 aa12.31□□□□□ -0.44
SQSTM1-203ENST00000422245 USP46P62068 366 aa12.31□□□□□ -0.44
SQSTM1-203ENST00000422245 NR1H3Q13133 447 aa12.31□□□□□ -0.44
SQSTM1-203ENST00000422245 BIRC3Q13489 604 aa12.31□□□□□ -0.44
SQSTM1-203ENST00000422245 ZNF699Q32M78 642 aa12.31□□□□□ -0.44
SQSTM1-203ENST00000422245 EML3Q32P44 896 aa12.31□□□□□ -0.44
SQSTM1-203ENST00000422245 CEP68Q76N32 757 aa12.31□□□□□ -0.44
SQSTM1-203ENST00000422245 SLC9A9Q8IVB4 645 aa12.31□□□□□ -0.44
SQSTM1-203ENST00000422245 GRAMD1CQ8IYS0 662 aa12.31□□□□□ -0.44
SQSTM1-203ENST00000422245 B3GALNT2Q8NCR0 500 aa12.31□□□□□ -0.44
SQSTM1-203ENST00000422245 TTC16Q8NEE8 873 aa12.31□□□□□ -0.44
SQSTM1-203ENST00000422245 CCDC26Q8TAB7 109 aa12.31□□□□□ -0.44
SQSTM1-203ENST00000422245 TMEM174Q8WUU8 243 aa12.31□□□□□ -0.44
SQSTM1-203ENST00000422245 PAGE5Q96GU1 130 aa12.31□□□□□ -0.44
SQSTM1-203ENST00000422245 CYP2S1Q96SQ9 504 aa12.31□□□□□ -0.44
SQSTM1-203ENST00000422245 PARD6AQ9NPB6 346 aa12.31□□□□□ -0.44
SQSTM1-203ENST00000422245 NXF1Q9UBU9 619 aaKnown RBP12.31□□□□□ -0.44
SQSTM1-203ENST00000422245 SERTAD1Q9UHV2 236 aa12.31□□□□□ -0.44
SQSTM1-203ENST00000422245 SLC8A2Q9UPR5 921 aa12.31□□□□□ -0.44
SQSTM1-203ENST00000422245 ATP8B3O60423 1300 aa12.31□□□□□ -0.44
SQSTM1-203ENST00000422245 NCOR2Q9Y618 2525 aa12.31□□□□□ -0.44
SQSTM1-203ENST00000422245 SPAG17Q6Q759 2223 aa12.3□□□□□ -0.44
SQSTM1-203ENST00000422245 ZNF840PA6NDX5 716 aa12.3□□□□□ -0.44
SQSTM1-203ENST00000422245 KLRC4O43908 158 aa12.3□□□□□ -0.44
SQSTM1-203ENST00000422245 AKAP3O75969 853 aa12.3□□□□□ -0.44
SQSTM1-203ENST00000422245 OLFM2O95897 454 aa12.3□□□□□ -0.44
SQSTM1-203ENST00000422245 EGFP01133 1207 aa12.3□□□□□ -0.44
SQSTM1-203ENST00000422245 PFKFB1P16118 471 aa12.3□□□□□ -0.44
SQSTM1-203ENST00000422245 CASP4P49662 377 aa12.3□□□□□ -0.44
SQSTM1-203ENST00000422245 CLDN10P78369 228 aa12.3□□□□□ -0.44
SQSTM1-203ENST00000422245 SLC7A9P82251 487 aa12.3□□□□□ -0.44
SQSTM1-203ENST00000422245 SPEM2Q0P670 501 aa12.3□□□□□ -0.44
SQSTM1-203ENST00000422245 STK4Q13043 487 aa12.3□□□□□ -0.44
SQSTM1-203ENST00000422245 PSMD2Q13200 908 aa12.3□□□□□ -0.44
SQSTM1-203ENST00000422245 SRSF5Q13243 272 aaKnown RBP12.3□□□□□ -0.44
SQSTM1-203ENST00000422245 NCOA4Q13772 614 aa12.3□□□□□ -0.44
SQSTM1-203ENST00000422245 ZNF667Q5HYK9 610 aa12.3□□□□□ -0.44
SQSTM1-203ENST00000422245 TDRD10Q5VZ19 366 aaKnown RBP12.3□□□□□ -0.44
SQSTM1-203ENST00000422245 PKN3Q6P5Z2 889 aa12.3□□□□□ -0.44
SQSTM1-203ENST00000422245 KIAA0895Q8NCT3 520 aa12.3□□□□□ -0.44
SQSTM1-203ENST00000422245 PLEKHO2Q8TD55 490 aa12.3□□□□□ -0.44
SQSTM1-203ENST00000422245 PARD3BQ8TEW8 1205 aa12.3□□□□□ -0.44
SQSTM1-203ENST00000422245 GAB3Q8WWW8 586 aa12.3□□□□□ -0.44
SQSTM1-203ENST00000422245 ZNF516Q92618 1163 aa12.3□□□□□ -0.44
SQSTM1-203ENST00000422245 CD101Q93033 1021 aa12.3□□□□□ -0.44
SQSTM1-203ENST00000422245 ACDQ96AP0 544 aa12.3□□□□□ -0.44
SQSTM1-203ENST00000422245 SLITRK1Q96PX8 696 aa12.3□□□□□ -0.44
SQSTM1-203ENST00000422245 ZNF518BQ9C0D4 1074 aa12.3□□□□□ -0.44
SQSTM1-203ENST00000422245 DPEP3Q9H4B8 488 aa12.3□□□□□ -0.44
SQSTM1-203ENST00000422245 SMYD3Q9H7B4 428 aa12.3□□□□□ -0.44
SQSTM1-203ENST00000422245 NME7Q9Y5B8 376 aa12.3□□□□□ -0.44
SQSTM1-203ENST00000422245 KIAA1549LQ6ZVL6 1849 aa12.3□□□□□ -0.44
SQSTM1-203ENST00000422245 DNAH14Q0VDD8 3507 aa12.29□□□□□ -0.44
SQSTM1-203ENST00000422245 RALGAPA1Q6GYQ0 2036 aa12.29□□□□□ -0.44
SQSTM1-203ENST00000422245 MED19A0JLT2 244 aaPredicted RBP12.29□□□□□ -0.44
SQSTM1-203ENST00000422245 LRRIQ3A6PVS8 624 aaPredicted RBP12.29□□□□□ -0.44
SQSTM1-203ENST00000422245 LEFTY2O00292 366 aa12.29□□□□□ -0.44
SQSTM1-203ENST00000422245 RTN3O95197 1032 aaPredicted RBP12.29□□□□□ -0.44
SQSTM1-203ENST00000422245 KIF20AO95235 890 aa12.29□□□□□ -0.44
SQSTM1-203ENST00000422245 OAS1P00973 400 aaKnown RBP12.29□□□□□ -0.44
SQSTM1-203ENST00000422245 P4HA1P13674 534 aa12.29□□□□□ -0.44
SQSTM1-203ENST00000422245 CMA1P23946 247 aa12.29□□□□□ -0.44
SQSTM1-203ENST00000422245 GALK1P51570 392 aa12.29□□□□□ -0.44
SQSTM1-203ENST00000422245 KRT85P78386 507 aa12.29□□□□□ -0.44
SQSTM1-203ENST00000422245 CSRP2Q16527 193 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms