RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 SLC46A1Q96NT5 459 aa4.03□□□□□ -1.76
SDCBPP3-201ENST00000419629 KLC4Q9NSK0 619 aa4.03□□□□□ -1.76
SDCBPP3-201ENST00000419629 BCCIPQ9P287 314 aaKnown RBP eCLIP4.03□□□□□ -1.76
SDCBPP3-201ENST00000419629 TPCN1Q9ULQ1 816 aa4.03□□□□□ -1.76
SDCBPP3-201ENST00000419629 AGAP1Q9UPQ3 857 aa4.03□□□□□ -1.76
SDCBPP3-201ENST00000419629 SMG6Q86US8 1419 aaKnown RBP4.03□□□□□ -1.76
SDCBPP3-201ENST00000419629 FRMPD2Q68DX3 1309 aaPredicted RBP4.02□□□□□ -1.77
SDCBPP3-201ENST00000419629 ADGRA2Q96PE1 1338 aa4.02□□□□□ -1.77
SDCBPP3-201ENST00000419629 GOLGA6L3A6NEY3 463 aa4.02□□□□□ -1.77
SDCBPP3-201ENST00000419629 ISM1B1AKI9 464 aa4.02□□□□□ -1.77
SDCBPP3-201ENST00000419629 GOLIM4O00461 696 aa4.02□□□□□ -1.77
SDCBPP3-201ENST00000419629 MOSPD3O75425 235 aa4.02□□□□□ -1.77
SDCBPP3-201ENST00000419629 ZBED1O96006 694 aa4.02□□□□□ -1.77
SDCBPP3-201ENST00000419629 HRGP04196 525 aa4.02□□□□□ -1.77
SDCBPP3-201ENST00000419629 HNRNPCP07910 306 aaKnown RBP eCLIP4.02□□□□□ -1.77
SDCBPP3-201ENST00000419629 EN2P19622 333 aaPredicted RBP4.02□□□□□ -1.77
SDCBPP3-201ENST00000419629 CERS1P27544 350 aa4.02□□□□□ -1.77
SDCBPP3-201ENST00000419629 PXNP49023 591 aaPredicted RBP4.02□□□□□ -1.77
SDCBPP3-201ENST00000419629 WNT3P56703 355 aa4.02□□□□□ -1.77
SDCBPP3-201ENST00000419629 CNN3Q15417 329 aaKnown RBP4.02□□□□□ -1.77
SDCBPP3-201ENST00000419629 RBM20Q5T481 1227 aaKnown RBP4.02□□□□□ -1.77
SDCBPP3-201ENST00000419629 KIAA0319LQ8IZA0 1049 aa4.02□□□□□ -1.77
SDCBPP3-201ENST00000419629 TTC8Q8TAM2 541 aa4.02□□□□□ -1.77
SDCBPP3-201ENST00000419629 TSR2Q969E8 191 aaKnown RBP4.02□□□□□ -1.77
SDCBPP3-201ENST00000419629 FAM136AQ96C01 138 aa4.02□□□□□ -1.77
SDCBPP3-201ENST00000419629 PBKQ96KB5 322 aa4.02□□□□□ -1.77
SDCBPP3-201ENST00000419629 ALG8Q9BVK2 526 aa4.02□□□□□ -1.77
SDCBPP3-201ENST00000419629 TRIM54Q9BYV2 358 aa4.02□□□□□ -1.77
SDCBPP3-201ENST00000419629 TTYH3Q9C0H2 523 aa4.02□□□□□ -1.77
SDCBPP3-201ENST00000419629 LRRC27Q9C0I9 530 aa4.02□□□□□ -1.77
SDCBPP3-201ENST00000419629 BHMT2Q9H2M3 363 aa4.02□□□□□ -1.77
SDCBPP3-201ENST00000419629 CHMP4BQ9H444 224 aaKnown RBP4.02□□□□□ -1.77
SDCBPP3-201ENST00000419629 ZMAT3Q9HA38 289 aaKnown RBP4.02□□□□□ -1.77
SDCBPP3-201ENST00000419629 OBP2AQ9NY56 170 aa4.02□□□□□ -1.77
SDCBPP3-201ENST00000419629 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.02□□□□□ -1.77
SDCBPP3-201ENST00000419629 XPR1Q9UBH6 696 aa4.02□□□□□ -1.77
SDCBPP3-201ENST00000419629 SERGEFQ9UGK8 458 aa4.02□□□□□ -1.77
SDCBPP3-201ENST00000419629 L1RE1Q9UN81 338 aa4.02□□□□□ -1.77
SDCBPP3-201ENST00000419629 RNF123Q5XPI4 1314 aa4.01□□□□□ -1.77
SDCBPP3-201ENST00000419629 BTN3A1O00481 513 aa4.01□□□□□ -1.77
SDCBPP3-201ENST00000419629 KIF3BO15066 747 aa4.01□□□□□ -1.77
SDCBPP3-201ENST00000419629 DNAJB5O75953 348 aa4.01□□□□□ -1.77
SDCBPP3-201ENST00000419629 NXPH3O95157 252 aa4.01□□□□□ -1.77
SDCBPP3-201ENST00000419629 NR2F6P10588 404 aa4.01□□□□□ -1.77
SDCBPP3-201ENST00000419629 KITP10721 976 aa4.01□□□□□ -1.77
SDCBPP3-201ENST00000419629 NPR1P16066 1061 aa4.01□□□□□ -1.77
SDCBPP3-201ENST00000419629 NDUFB7P17568 137 aa4.01□□□□□ -1.77
SDCBPP3-201ENST00000419629 PPIFP30405 207 aaKnown RBP4.01□□□□□ -1.77
SDCBPP3-201ENST00000419629 LRPAP1P30533 357 aa4.01□□□□□ -1.77
SDCBPP3-201ENST00000419629 MMP13P45452 471 aa4.01□□□□□ -1.77
SDCBPP3-201ENST00000419629 POLGP54098 1239 aaPredicted RBP4.01□□□□□ -1.77
SDCBPP3-201ENST00000419629 SLC13A2Q13183 592 aa4.01□□□□□ -1.77
SDCBPP3-201ENST00000419629 FHL1Q13642 323 aa4.01□□□□□ -1.77
SDCBPP3-201ENST00000419629 POLD3Q15054 466 aaPredicted RBP4.01□□□□□ -1.77
SDCBPP3-201ENST00000419629 KIAA0753Q2KHM9 967 aa4.01□□□□□ -1.77
SDCBPP3-201ENST00000419629 MGAT5BQ3V5L5 792 aa4.01□□□□□ -1.77
SDCBPP3-201ENST00000419629 HSP90AB2PQ58FF8 381 aa4.01□□□□□ -1.77
SDCBPP3-201ENST00000419629 MORN5Q5VZ52 161 aa4.01□□□□□ -1.77
SDCBPP3-201ENST00000419629 ICE2Q659A1 982 aa4.01□□□□□ -1.77
SDCBPP3-201ENST00000419629 TMEM108Q6UXF1 575 aa4.01□□□□□ -1.77
SDCBPP3-201ENST00000419629 ZNF66Q6ZN08 573 aa4.01□□□□□ -1.77
SDCBPP3-201ENST00000419629 CHST15Q7LFX5 561 aaPredicted RBP4.01□□□□□ -1.77
SDCBPP3-201ENST00000419629 NEK8Q86SG6 692 aa4.01□□□□□ -1.77
SDCBPP3-201ENST00000419629 C14orf80Q86SX3 495 aa4.01□□□□□ -1.77
SDCBPP3-201ENST00000419629 DNAJC5GQ8N7S2 189 aa4.01□□□□□ -1.77
SDCBPP3-201ENST00000419629 ATRIPQ8WXE1 791 aa4.01□□□□□ -1.77
SDCBPP3-201ENST00000419629 LRTOMTQ8WZ04 291 aa4.01□□□□□ -1.77
SDCBPP3-201ENST00000419629 RFKQ969G6 155 aa4.01□□□□□ -1.77
SDCBPP3-201ENST00000419629 FKBP10Q96AY3 582 aa4.01□□□□□ -1.77
SDCBPP3-201ENST00000419629 P2RX7Q99572 595 aaKnown RBP4.01□□□□□ -1.77
SDCBPP3-201ENST00000419629 PTDSS2Q9BVG9 487 aa4.01□□□□□ -1.77
SDCBPP3-201ENST00000419629 ACTRT3Q9BYD9 372 aa4.01□□□□□ -1.77
SDCBPP3-201ENST00000419629 ZNF518BQ9C0D4 1074 aa4.01□□□□□ -1.77
SDCBPP3-201ENST00000419629 SMOC2Q9H3U7 446 aa4.01□□□□□ -1.77
SDCBPP3-201ENST00000419629 EHD3Q9NZN3 535 aa4.01□□□□□ -1.77
SDCBPP3-201ENST00000419629 SH3BP4Q9P0V3 963 aa4.01□□□□□ -1.77
SDCBPP3-201ENST00000419629 CHPF2Q9P2E5 772 aa4.01□□□□□ -1.77
SDCBPP3-201ENST00000419629 OGDHLQ9ULD0 1010 aa4.01□□□□□ -1.77
SDCBPP3-201ENST00000419629 CNTNAP2Q9UHC6 1331 aa4□□□□□ -1.77
SDCBPP3-201ENST00000419629 TARM1B6A8C7 271 aa4□□□□□ -1.77
SDCBPP3-201ENST00000419629 TLR5O60602 858 aa4□□□□□ -1.77
SDCBPP3-201ENST00000419629 LETM1O95202 739 aaPredicted RBP4□□□□□ -1.77
SDCBPP3-201ENST00000419629 BRAFP15056 766 aa4□□□□□ -1.77
SDCBPP3-201ENST00000419629 RPL17P18621 184 aaKnown RBP4□□□□□ -1.77
SDCBPP3-201ENST00000419629 PTMSP20962 102 aa4□□□□□ -1.77
SDCBPP3-201ENST00000419629 DRD4P21917 467 aa4□□□□□ -1.77
SDCBPP3-201ENST00000419629 SLC11A2P49281 568 aa4□□□□□ -1.77
SDCBPP3-201ENST00000419629 ARFIP2P53365 341 aa4□□□□□ -1.77
SDCBPP3-201ENST00000419629 UCP3P55916 312 aa4□□□□□ -1.77
SDCBPP3-201ENST00000419629 KRT17Q04695 432 aa4□□□□□ -1.77
SDCBPP3-201ENST00000419629 E2F2Q14209 437 aa4□□□□□ -1.77
SDCBPP3-201ENST00000419629 HLTFQ14527 1009 aaKnown RBP eCLIP4□□□□□ -1.77
SDCBPP3-201ENST00000419629 GRM3Q14832 879 aa4□□□□□ -1.77
SDCBPP3-201ENST00000419629 RNF220Q5VTB9 566 aa4□□□□□ -1.77
SDCBPP3-201ENST00000419629 CRELD2Q6UXH1 353 aaPredicted RBP4□□□□□ -1.77
SDCBPP3-201ENST00000419629 YTHDF3Q7Z739 585 aaKnown RBP4□□□□□ -1.77
SDCBPP3-201ENST00000419629 DGKHQ86XP1 1220 aa4□□□□□ -1.77
SDCBPP3-201ENST00000419629 MPP5Q8N3R9 675 aa4□□□□□ -1.77
SDCBPP3-201ENST00000419629 SLC15A4Q8N697 577 aa4□□□□□ -1.77
SDCBPP3-201ENST00000419629 CELF5Q8N6W0 485 aaKnown RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms