RNA–Protein interactions for RNA: ENST00000419500.1

HMGN1P4-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 4, humanhuman

BASIC

Gene HMGN1P4, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P4-201ENST00000419500 DMAP1Q9NPF5 467 aaPredicted RBP13.53□□□□□ -0.24
HMGN1P4-201ENST00000419500 TDP1Q9NUW8 608 aa13.53□□□□□ -0.24
HMGN1P4-201ENST00000419500 TRPM5Q9NZQ8 1165 aa13.53□□□□□ -0.24
HMGN1P4-201ENST00000419500 COL4A2P08572 1712 aa13.53□□□□□ -0.24
HMGN1P4-201ENST00000419500 VPS13AQ96RL7 3174 aa13.52□□□□□ -0.24
HMGN1P4-201ENST00000419500 BICDL2A1A5D9 508 aa13.52□□□□□ -0.25
HMGN1P4-201ENST00000419500 FAM170BA6NMN3 283 aa13.52□□□□□ -0.25
HMGN1P4-201ENST00000419500 NCAM2O15394 837 aa13.52□□□□□ -0.25
HMGN1P4-201ENST00000419500 USP17L7P0C7H9 530 aa13.52□□□□□ -0.25
HMGN1P4-201ENST00000419500 GLULP15104 373 aa13.52□□□□□ -0.25
HMGN1P4-201ENST00000419500 CD58P19256 250 aa13.52□□□□□ -0.25
HMGN1P4-201ENST00000419500 KPNA1P52294 538 aaPredicted RBP13.52□□□□□ -0.25
HMGN1P4-201ENST00000419500 CACNA2D1P54289 1103 aa13.52□□□□□ -0.25
HMGN1P4-201ENST00000419500 ANGPT1Q15389 498 aa13.52□□□□□ -0.25
HMGN1P4-201ENST00000419500 CCDC40Q4G0X9 1142 aa13.52□□□□□ -0.25
HMGN1P4-201ENST00000419500 WDR44Q5JSH3 913 aa13.52□□□□□ -0.25
HMGN1P4-201ENST00000419500 MSANTD3Q96H12 275 aa13.52□□□□□ -0.25
HMGN1P4-201ENST00000419500 ZFYVE19Q96K21 471 aa13.52□□□□□ -0.25
HMGN1P4-201ENST00000419500 SLITRK1Q96PX8 696 aa13.52□□□□□ -0.25
HMGN1P4-201ENST00000419500 NELL2Q99435 816 aa13.52□□□□□ -0.25
HMGN1P4-201ENST00000419500 OSBPL6Q9BZF3 934 aa13.52□□□□□ -0.25
HMGN1P4-201ENST00000419500 CYP3A43Q9HB55 503 aa13.52□□□□□ -0.25
HMGN1P4-201ENST00000419500 APOBEC3GQ9HC16 384 aaKnown RBP13.52□□□□□ -0.25
HMGN1P4-201ENST00000419500 METTL14Q9HCE5 456 aaKnown RBP13.52□□□□□ -0.25
HMGN1P4-201ENST00000419500 KRT82Q9NSB4 513 aa13.52□□□□□ -0.25
HMGN1P4-201ENST00000419500 FAM49BQ9NUQ9 324 aa13.52□□□□□ -0.25
HMGN1P4-201ENST00000419500 FAM86C1Q9NVL1 165 aa13.52□□□□□ -0.25
HMGN1P4-201ENST00000419500 RAB20Q9NX57 234 aa13.52□□□□□ -0.25
HMGN1P4-201ENST00000419500 HMGXB4Q9UGU5 601 aa13.52□□□□□ -0.25
HMGN1P4-201ENST00000419500 CTNND2Q9UQB3 1225 aa13.52□□□□□ -0.25
HMGN1P4-201ENST00000419500 MIA3Q5JRA6 1907 aa13.51□□□□□ -0.25
HMGN1P4-201ENST00000419500 ARNTLO00327 626 aa13.51□□□□□ -0.25
HMGN1P4-201ENST00000419500 LRRN2O75325 713 aa13.51□□□□□ -0.25
HMGN1P4-201ENST00000419500 AP1G2O75843 785 aa13.51□□□□□ -0.25
HMGN1P4-201ENST00000419500 RTN3O95197 1032 aaPredicted RBP13.51□□□□□ -0.25
HMGN1P4-201ENST00000419500 CCDC130P13994 396 aa13.51□□□□□ -0.25
HMGN1P4-201ENST00000419500 CD44P16070 742 aaKnown RBP13.51□□□□□ -0.25
HMGN1P4-201ENST00000419500 TARSP26639 723 aaKnown RBP13.51□□□□□ -0.25
HMGN1P4-201ENST00000419500 MAGEA9P43362 315 aa13.51□□□□□ -0.25
HMGN1P4-201ENST00000419500 PPP3CCP48454 512 aa13.51□□□□□ -0.25
HMGN1P4-201ENST00000419500 USP46P62068 366 aa13.51□□□□□ -0.25
HMGN1P4-201ENST00000419500 INCA1Q0VD86 236 aa13.51□□□□□ -0.25
HMGN1P4-201ENST00000419500 MORC3Q14149 939 aa13.51□□□□□ -0.25
HMGN1P4-201ENST00000419500 CAMK4Q16566 473 aa13.51□□□□□ -0.25
HMGN1P4-201ENST00000419500 CBWD6Q4V339 395 aa13.51□□□□□ -0.25
HMGN1P4-201ENST00000419500 CBWD3Q5JTY5 395 aa13.51□□□□□ -0.25
HMGN1P4-201ENST00000419500 CBWD5Q5RIA9 395 aa13.51□□□□□ -0.25
HMGN1P4-201ENST00000419500 CC2D1AQ6P1N0 951 aaPredicted RBP13.51□□□□□ -0.25
HMGN1P4-201ENST00000419500 C1orf228Q6PIY5 440 aa13.51□□□□□ -0.25
HMGN1P4-201ENST00000419500 CRYBG2Q8N1P7 616 aa13.51□□□□□ -0.25
HMGN1P4-201ENST00000419500 SLC2A14Q8TDB8 520 aa13.51□□□□□ -0.25
HMGN1P4-201ENST00000419500 NELFBQ8WX92 580 aa13.51□□□□□ -0.25
HMGN1P4-201ENST00000419500 FAM3CQ92520 227 aa13.51□□□□□ -0.25
HMGN1P4-201ENST00000419500 USP13Q92995 863 aaPredicted RBP13.51□□□□□ -0.25
HMGN1P4-201ENST00000419500 CEP63Q96MT8 703 aa13.51□□□□□ -0.25
HMGN1P4-201ENST00000419500 TTLL2Q9BWV7 592 aa13.51□□□□□ -0.25
HMGN1P4-201ENST00000419500 NT5C1AQ9BXI3 368 aa13.51□□□□□ -0.25
HMGN1P4-201ENST00000419500 NDRG2Q9UN36 371 aaKnown RBP13.51□□□□□ -0.25
HMGN1P4-201ENST00000419500 CCL26Q9Y258 94 aa13.51□□□□□ -0.25
HMGN1P4-201ENST00000419500 MTF2Q9Y483 593 aaPredicted RBP13.51□□□□□ -0.25
HMGN1P4-201ENST00000419500 DENND4CQ5VZ89 1909 aa13.51□□□□□ -0.25
HMGN1P4-201ENST00000419500 MYO15AQ9UKN7 3530 aa13.5□□□□□ -0.25
HMGN1P4-201ENST00000419500 C2orf78A6NCI8 922 aa13.5□□□□□ -0.25
HMGN1P4-201ENST00000419500 ABL1P00519 1130 aa13.5□□□□□ -0.25
HMGN1P4-201ENST00000419500 FAM200BP0CF97 657 aa13.5□□□□□ -0.25
HMGN1P4-201ENST00000419500 BMP6P22004 513 aa13.5□□□□□ -0.25
HMGN1P4-201ENST00000419500 TAF10Q12962 218 aa13.5□□□□□ -0.25
HMGN1P4-201ENST00000419500 PAK1Q13153 545 aa13.5□□□□□ -0.25
HMGN1P4-201ENST00000419500 ZNF268Q14587 947 aaPredicted RBP13.5□□□□□ -0.25
HMGN1P4-201ENST00000419500 FRMD5Q7Z6J6 570 aa13.5□□□□□ -0.25
HMGN1P4-201ENST00000419500 FUKQ8N0W3 1084 aa13.5□□□□□ -0.25
HMGN1P4-201ENST00000419500 NUP93Q8N1F7 819 aa13.5□□□□□ -0.25
HMGN1P4-201ENST00000419500 TTC39CQ8N584 583 aa13.5□□□□□ -0.25
HMGN1P4-201ENST00000419500 C12orf29Q8N999 325 aa13.5□□□□□ -0.25
HMGN1P4-201ENST00000419500 TRIML1Q8N9V2 468 aa13.5□□□□□ -0.25
HMGN1P4-201ENST00000419500 PDZD8Q8NEN9 1154 aa13.5□□□□□ -0.25
HMGN1P4-201ENST00000419500 TTC8Q8TAM2 541 aa13.5□□□□□ -0.25
HMGN1P4-201ENST00000419500 FAXDC2Q96IV6 333 aa13.5□□□□□ -0.25
HMGN1P4-201ENST00000419500 LRRC3BQ96PB8 259 aa13.5□□□□□ -0.25
HMGN1P4-201ENST00000419500 KCNK16Q96T55 309 aa13.5□□□□□ -0.25
HMGN1P4-201ENST00000419500 C8orf33Q9H7E9 229 aaPredicted RBP13.5□□□□□ -0.25
HMGN1P4-201ENST00000419500 TMEM30AQ9NV96 361 aa13.5□□□□□ -0.25
HMGN1P4-201ENST00000419500 SPATA6Q9NWH7 488 aaPredicted RBP13.5□□□□□ -0.25
HMGN1P4-201ENST00000419500 DLGAP2Q9P1A6 1054 aa13.5□□□□□ -0.25
HMGN1P4-201ENST00000419500 GREB1Q4ZG55 1949 aa13.49□□□□□ -0.25
HMGN1P4-201ENST00000419500 USP34Q70CQ2 3546 aa13.49□□□□□ -0.25
HMGN1P4-201ENST00000419500 PPP1R3GB7ZBB8 358 aa13.49□□□□□ -0.25
HMGN1P4-201ENST00000419500 PFKLP17858 780 aa13.49□□□□□ -0.25
HMGN1P4-201ENST00000419500 HDCP19113 662 aa13.49□□□□□ -0.25
HMGN1P4-201ENST00000419500 YWHAQP27348 245 aa13.49□□□□□ -0.25
HMGN1P4-201ENST00000419500 ADORA2BP29275 332 aa13.49□□□□□ -0.25
HMGN1P4-201ENST00000419500 SLC5A3P53794 718 aa13.49□□□□□ -0.25
HMGN1P4-201ENST00000419500 MLLT6P55198 1093 aaPredicted RBP13.49□□□□□ -0.25
HMGN1P4-201ENST00000419500 MCCD1P59942 119 aaPredicted RBP13.49□□□□□ -0.25
HMGN1P4-201ENST00000419500 TNK2Q07912 1038 aa13.49□□□□□ -0.25
HMGN1P4-201ENST00000419500 MTF1Q14872 753 aa13.49□□□□□ -0.25
HMGN1P4-201ENST00000419500 ITPRIPL2Q3MIP1 535 aa13.49□□□□□ -0.25
HMGN1P4-201ENST00000419500 ZNF394Q53GI3 561 aa13.49□□□□□ -0.25
HMGN1P4-201ENST00000419500 TTI2Q6NXR4 508 aa13.49□□□□□ -0.25
HMGN1P4-201ENST00000419500 FILIP1Q7Z7B0 1213 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms