RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 SP9P0CG40 484 aa17.51■□□□□ 0.39
LINC00404-201ENST00000418660 EPB41P11171 864 aaKnown RBP17.51■□□□□ 0.39
LINC00404-201ENST00000418660 PFKLP17858 780 aa17.51■□□□□ 0.39
LINC00404-201ENST00000418660 PPP3CCP48454 512 aa17.51■□□□□ 0.39
LINC00404-201ENST00000418660 NDST1P52848 882 aa17.51■□□□□ 0.39
LINC00404-201ENST00000418660 FKBP3Q00688 224 aaKnown RBP17.51■□□□□ 0.39
LINC00404-201ENST00000418660 KRT39Q6A163 491 aa17.51■□□□□ 0.39
LINC00404-201ENST00000418660 ANKRD40Q6AI12 368 aa17.51■□□□□ 0.39
LINC00404-201ENST00000418660 PAQR9Q6ZVX9 377 aa17.51■□□□□ 0.39
LINC00404-201ENST00000418660 FRMD5Q7Z6J6 570 aa17.51■□□□□ 0.39
LINC00404-201ENST00000418660 ACOT1Q86TX2 421 aa17.51■□□□□ 0.39
LINC00404-201ENST00000418660 RALGPS2Q86X27 583 aaPredicted RBP17.51■□□□□ 0.39
LINC00404-201ENST00000418660 ZC3H3Q8IXZ2 948 aaKnown RBP17.51■□□□□ 0.39
LINC00404-201ENST00000418660 MAML2Q8IZL2 1156 aaPredicted RBP17.51■□□□□ 0.39
LINC00404-201ENST00000418660 SLC22A12Q96S37 553 aa17.51■□□□□ 0.39
LINC00404-201ENST00000418660 CYP2S1Q96SQ9 504 aa17.51■□□□□ 0.39
LINC00404-201ENST00000418660 FAM83CQ9BQN1 747 aa17.51■□□□□ 0.39
LINC00404-201ENST00000418660 MED10Q9BTT4 135 aa17.51■□□□□ 0.39
LINC00404-201ENST00000418660 CYP3A43Q9HB55 503 aa17.51■□□□□ 0.39
LINC00404-201ENST00000418660 APOBEC3GQ9HC16 384 aaKnown RBP17.51■□□□□ 0.39
LINC00404-201ENST00000418660 TRPM5Q9NZQ8 1165 aa17.51■□□□□ 0.39
LINC00404-201ENST00000418660 OBSL1O75147 1896 aa17.5■□□□□ 0.39
LINC00404-201ENST00000418660 SPECC1L-ADORA2AF8WAN1 911 aa17.5■□□□□ 0.39
LINC00404-201ENST00000418660 STX10O60499 249 aa17.5■□□□□ 0.39
LINC00404-201ENST00000418660 GADD45BO75293 160 aaPredicted RBP17.5■□□□□ 0.39
LINC00404-201ENST00000418660 CKMP06732 381 aa17.5■□□□□ 0.39
LINC00404-201ENST00000418660 HDCP19113 662 aa17.5■□□□□ 0.39
LINC00404-201ENST00000418660 CTHP32929 405 aa17.5■□□□□ 0.39
LINC00404-201ENST00000418660 SOX9P48436 509 aa17.5■□□□□ 0.39
LINC00404-201ENST00000418660 PDE6CP51160 858 aa17.5■□□□□ 0.39
LINC00404-201ENST00000418660 LRRC63Q05C16 580 aa17.5■□□□□ 0.39
LINC00404-201ENST00000418660 TNK2Q07912 1038 aa17.5■□□□□ 0.39
LINC00404-201ENST00000418660 ITPRIPL2Q3MIP1 535 aa17.5■□□□□ 0.39
LINC00404-201ENST00000418660 CC2D1AQ6P1N0 951 aaPredicted RBP17.5■□□□□ 0.39
LINC00404-201ENST00000418660 FAM35AQ86V20 835 aa17.5■□□□□ 0.39
LINC00404-201ENST00000418660 FUKQ8N0W3 1084 aa17.5■□□□□ 0.39
LINC00404-201ENST00000418660 NUP93Q8N1F7 819 aa17.5■□□□□ 0.39
LINC00404-201ENST00000418660 ARL14EPQ8N8R7 260 aaPredicted RBP17.5■□□□□ 0.39
LINC00404-201ENST00000418660 CCDC150Q8NCX0 1101 aa17.5■□□□□ 0.39
LINC00404-201ENST00000418660 TTC8Q8TAM2 541 aa17.5■□□□□ 0.39
LINC00404-201ENST00000418660 SMARCD1Q96GM5 515 aa17.5■□□□□ 0.39
LINC00404-201ENST00000418660 LMAN1LQ9HAT1 526 aa17.5■□□□□ 0.39
LINC00404-201ENST00000418660 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.5■□□□□ 0.39
LINC00404-201ENST00000418660 MAN1B1Q9UKM7 699 aa17.5■□□□□ 0.39
LINC00404-201ENST00000418660 FBXO4Q9UKT5 387 aa17.5■□□□□ 0.39
LINC00404-201ENST00000418660 PTPRDP23468 1912 aa17.5■□□□□ 0.39
LINC00404-201ENST00000418660 C2orf78A6NCI8 922 aa17.49■□□□□ 0.39
LINC00404-201ENST00000418660 ZNF840PA6NDX5 716 aa17.49■□□□□ 0.39
LINC00404-201ENST00000418660 SLC16A3O15427 465 aaKnown RBP17.49■□□□□ 0.39
LINC00404-201ENST00000418660 GFRA3O60609 400 aa17.49■□□□□ 0.39
LINC00404-201ENST00000418660 RTN3O95197 1032 aaPredicted RBP17.49■□□□□ 0.39
LINC00404-201ENST00000418660 CHRNB1P11230 501 aa17.49■□□□□ 0.39
LINC00404-201ENST00000418660 TRIM21P19474 475 aaKnown RBP17.49■□□□□ 0.39
LINC00404-201ENST00000418660 PPP1R2P41236 205 aa17.49■□□□□ 0.39
LINC00404-201ENST00000418660 PMS1P54277 932 aaKnown RBP17.49■□□□□ 0.39
LINC00404-201ENST00000418660 INCA1Q0VD86 236 aa17.49■□□□□ 0.39
LINC00404-201ENST00000418660 STIM1Q13586 685 aa17.49■□□□□ 0.39
LINC00404-201ENST00000418660 ZNF528Q3MIS6 628 aa17.49■□□□□ 0.39
LINC00404-201ENST00000418660 ISM2Q6H9L7 571 aa17.49■□□□□ 0.39
LINC00404-201ENST00000418660 RIN3Q8TB24 985 aa17.49■□□□□ 0.39
LINC00404-201ENST00000418660 NKD2Q969F2 451 aaPredicted RBP17.49■□□□□ 0.39
LINC00404-201ENST00000418660 DHTKD1Q96HY7 919 aaPredicted RBP17.49■□□□□ 0.39
LINC00404-201ENST00000418660 FAXDC2Q96IV6 333 aa17.49■□□□□ 0.39
LINC00404-201ENST00000418660 SLITRK1Q96PX8 696 aa17.49■□□□□ 0.39
LINC00404-201ENST00000418660 KCNK16Q96T55 309 aa17.49■□□□□ 0.39
LINC00404-201ENST00000418660 IER2Q9BTL4 223 aa17.49■□□□□ 0.39
LINC00404-201ENST00000418660 NIF3L1Q9GZT8 377 aa17.49■□□□□ 0.39
LINC00404-201ENST00000418660 CHRDQ9H2X0 955 aa17.49■□□□□ 0.39
LINC00404-201ENST00000418660 DMAP1Q9NPF5 467 aaPredicted RBP17.49■□□□□ 0.39
LINC00404-201ENST00000418660 HMGXB4Q9UGU5 601 aa17.49■□□□□ 0.39
LINC00404-201ENST00000418660 PIEZO1Q92508 2521 aa17.49■□□□□ 0.39
LINC00404-201ENST00000418660 PSMA7O14818 248 aa17.48■□□□□ 0.39
LINC00404-201ENST00000418660 TCF3P15923 654 aa17.48■□□□□ 0.39
LINC00404-201ENST00000418660 YWHAQP27348 245 aa17.48■□□□□ 0.39
LINC00404-201ENST00000418660 MXI1P50539 228 aa17.48■□□□□ 0.39
LINC00404-201ENST00000418660 TAF10Q12962 218 aa17.48■□□□□ 0.39
LINC00404-201ENST00000418660 ORC1Q13415 861 aa17.48■□□□□ 0.39
LINC00404-201ENST00000418660 RUNX3Q13761 415 aa17.48■□□□□ 0.39
LINC00404-201ENST00000418660 MTF1Q14872 753 aa17.48■□□□□ 0.39
LINC00404-201ENST00000418660 PDGFRLQ15198 375 aa17.48■□□□□ 0.39
LINC00404-201ENST00000418660 ZNF77Q15935 545 aa17.48■□□□□ 0.39
LINC00404-201ENST00000418660 MAMSTRQ6ZN01 415 aa17.48■□□□□ 0.39
LINC00404-201ENST00000418660 FBXL13Q8NEE6 735 aa17.48■□□□□ 0.39
LINC00404-201ENST00000418660 SLC2A14Q8TDB8 520 aa17.48■□□□□ 0.39
LINC00404-201ENST00000418660 NT5C1AQ9BXI3 368 aa17.48■□□□□ 0.39
LINC00404-201ENST00000418660 HPS4Q9NQG7 708 aa17.48■□□□□ 0.39
LINC00404-201ENST00000418660 COMMD8Q9NX08 183 aa17.48■□□□□ 0.39
LINC00404-201ENST00000418660 RAB20Q9NX57 234 aa17.48■□□□□ 0.39
LINC00404-201ENST00000418660 IL37Q9NZH6 218 aa17.48■□□□□ 0.39
LINC00404-201ENST00000418660 ARHGAP26Q9UNA1 814 aa17.48■□□□□ 0.39
LINC00404-201ENST00000418660 GREB1Q4ZG55 1949 aa17.48■□□□□ 0.39
LINC00404-201ENST00000418660 TRIM49BA6NDI0 452 aa17.47■□□□□ 0.39
LINC00404-201ENST00000418660 PRR23AA6NEV1 266 aa17.47■□□□□ 0.39
LINC00404-201ENST00000418660 TNFRSF10BO14763 440 aa17.47■□□□□ 0.39
LINC00404-201ENST00000418660 AP1G2O75843 785 aa17.47■□□□□ 0.39
LINC00404-201ENST00000418660 CCDC130P13994 396 aa17.47■□□□□ 0.39
LINC00404-201ENST00000418660 CSTF1Q05048 431 aaKnown RBP17.47■□□□□ 0.39
LINC00404-201ENST00000418660 USP4Q13107 963 aa17.47■□□□□ 0.39
LINC00404-201ENST00000418660 MTAPQ13126 283 aa17.47■□□□□ 0.39
LINC00404-201ENST00000418660 LRRC32Q14392 662 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms