RNA–Protein interactions for RNA: ENST00000414306.5

SBDS-202, Transcript of SBDS, ribosome maturation factor, humanhuman

TSL 5

Gene SBDS, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-202ENST00000414306 VSTM4Q8IW00 320 aa18.74■□□□□ 0.59
SBDS-202ENST00000414306 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.74■□□□□ 0.59
SBDS-202ENST00000414306 SLC20A1Q8WUM9 679 aa18.74■□□□□ 0.59
SBDS-202ENST00000414306 C8orf48Q96LL4 319 aa18.74■□□□□ 0.59
SBDS-202ENST00000414306 ZNF334Q9HCZ1 680 aaPredicted RBP18.74■□□□□ 0.59
SBDS-202ENST00000414306 DAAM1Q9Y4D1 1078 aa18.74■□□□□ 0.59
SBDS-202ENST00000414306 ITIH6Q6UXX5 1313 aa18.74■□□□□ 0.59
SBDS-202ENST00000414306 MBTPS2O43462 519 aa18.74■□□□□ 0.59
SBDS-202ENST00000414306 GYPCP04921 128 aa18.74■□□□□ 0.59
SBDS-202ENST00000414306 RHOP08100 348 aa18.74■□□□□ 0.59
SBDS-202ENST00000414306 CYP11B1P15538 503 aa18.74■□□□□ 0.59
SBDS-202ENST00000414306 GJA1P17302 382 aa18.74■□□□□ 0.59
SBDS-202ENST00000414306 PDE6CP51160 858 aa18.74■□□□□ 0.59
SBDS-202ENST00000414306 USP46P62068 366 aa18.74■□□□□ 0.59
SBDS-202ENST00000414306 PDE4CQ08493 712 aa18.74■□□□□ 0.59
SBDS-202ENST00000414306 GOLGA8FQ08AF8 430 aa18.74■□□□□ 0.59
SBDS-202ENST00000414306 GOLGA8DPQ0D2H9 430 aa18.74■□□□□ 0.59
SBDS-202ENST00000414306 SMAD4Q13485 552 aaKnown RBP18.74■□□□□ 0.59
SBDS-202ENST00000414306 CNGA2Q16280 664 aa18.74■□□□□ 0.59
SBDS-202ENST00000414306 LEXMQ3ZCV2 418 aa18.74■□□□□ 0.59
SBDS-202ENST00000414306 PABPC1LQ4VXU2 614 aaKnown RBP18.74■□□□□ 0.59
SBDS-202ENST00000414306 ATAT1Q5SQI0 421 aa18.74■□□□□ 0.59
SBDS-202ENST00000414306 PTCRAQ6ISU1 281 aaPredicted RBP18.74■□□□□ 0.59
SBDS-202ENST00000414306 NOP9Q86U38 636 aaKnown RBP18.74■□□□□ 0.59
SBDS-202ENST00000414306 ANKRD52Q8NB46 1076 aa18.74■□□□□ 0.59
SBDS-202ENST00000414306 SCAMP5Q8TAC9 235 aa18.74■□□□□ 0.59
SBDS-202ENST00000414306 SECISBP2LQ93073 1101 aaKnown RBP18.74■□□□□ 0.59
SBDS-202ENST00000414306 PSMG2Q969U7 264 aa18.74■□□□□ 0.59
SBDS-202ENST00000414306 NUP58Q9BVL2 599 aa18.74■□□□□ 0.59
SBDS-202ENST00000414306 POMKQ9H5K3 350 aa18.74■□□□□ 0.59
SBDS-202ENST00000414306 ASAH2Q9NR71 780 aa18.74■□□□□ 0.59
SBDS-202ENST00000414306 TCF20Q9UGU0 1960 aaKnown RBP18.73■□□□□ 0.59
SBDS-202ENST00000414306 PIK3R2O00459 728 aa18.73■□□□□ 0.59
SBDS-202ENST00000414306 NRG2O14511 850 aaPredicted RBP18.73■□□□□ 0.59
SBDS-202ENST00000414306 MED7O43513 233 aa18.73■□□□□ 0.59
SBDS-202ENST00000414306 PTPN2P17706 415 aa18.73■□□□□ 0.59
SBDS-202ENST00000414306 CASP14P31944 242 aa18.73■□□□□ 0.59
SBDS-202ENST00000414306 RGS7P49802 495 aa18.73■□□□□ 0.59
SBDS-202ENST00000414306 BCAT1P54687 386 aa18.73■□□□□ 0.59
SBDS-202ENST00000414306 CBX2Q14781 532 aaPredicted RBP18.73■□□□□ 0.59
SBDS-202ENST00000414306 SLC5A9Q2M3M2 681 aa18.73■□□□□ 0.59
SBDS-202ENST00000414306 E4F1Q66K89 784 aaPredicted RBP18.73■□□□□ 0.59
SBDS-202ENST00000414306 DENND5BQ6ZUT9 1274 aa18.73■□□□□ 0.59
SBDS-202ENST00000414306 RTL10Q7L3V2 364 aa18.73■□□□□ 0.59
SBDS-202ENST00000414306 ITIH5Q86UX2 942 aa18.73■□□□□ 0.59
SBDS-202ENST00000414306 ING5Q8WYH8 240 aa18.73■□□□□ 0.59
SBDS-202ENST00000414306 RIPOR3Q96MK2 946 aa18.73■□□□□ 0.59
SBDS-202ENST00000414306 PDCL3Q9H2J4 239 aa18.73■□□□□ 0.59
SBDS-202ENST00000414306 CSNK1G1Q9HCP0 422 aa18.73■□□□□ 0.59
SBDS-202ENST00000414306 IL9P15248 144 aa18.72■□□□□ 0.59
SBDS-202ENST00000414306 HMGA1P17096 107 aaKnown RBP18.72■□□□□ 0.59
SBDS-202ENST00000414306 KRT9P35527 623 aa18.72■□□□□ 0.59
SBDS-202ENST00000414306 SLC5A3P53794 718 aa18.72■□□□□ 0.59
SBDS-202ENST00000414306 SLC8A3P57103 927 aa18.72■□□□□ 0.59
SBDS-202ENST00000414306 BPIFB4P59827 614 aa18.72■□□□□ 0.59
SBDS-202ENST00000414306 BST2Q10589 180 aaKnown RBP18.72■□□□□ 0.59
SBDS-202ENST00000414306 ASIC2Q16515 512 aa18.72■□□□□ 0.59
SBDS-202ENST00000414306 FIGNQ5HY92 759 aa18.72■□□□□ 0.59
SBDS-202ENST00000414306 PDZD4Q76G19 769 aaPredicted RBP18.72■□□□□ 0.59
SBDS-202ENST00000414306 GET4Q7L5D6 327 aaPredicted RBP18.72■□□□□ 0.59
SBDS-202ENST00000414306 PIGZQ86VD9 579 aa18.72■□□□□ 0.59
SBDS-202ENST00000414306 TMC8Q8IU68 726 aa18.72■□□□□ 0.59
SBDS-202ENST00000414306 EPS8L1Q8TE68 723 aa18.72■□□□□ 0.59
SBDS-202ENST00000414306 TCEAL4Q96EI5 215 aa18.72■□□□□ 0.59
SBDS-202ENST00000414306 SPATA17Q96L03 361 aa18.72■□□□□ 0.59
SBDS-202ENST00000414306 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.72■□□□□ 0.59
SBDS-202ENST00000414306 DENND4CQ5VZ89 1909 aa18.72■□□□□ 0.59
SBDS-202ENST00000414306 CLUHO75153 1309 aa18.71■□□□□ 0.59
SBDS-202ENST00000414306 HHLA1C9JL84 531 aa18.71■□□□□ 0.59
SBDS-202ENST00000414306 MMEP08473 750 aa18.71■□□□□ 0.59
SBDS-202ENST00000414306 CSH1P0DML2 217 aa18.71■□□□□ 0.59
SBDS-202ENST00000414306 CSH2P0DML3 217 aa18.71■□□□□ 0.59
SBDS-202ENST00000414306 CCR2P41597 374 aa18.71■□□□□ 0.59
SBDS-202ENST00000414306 MTHFRP42898 656 aa18.71■□□□□ 0.59
SBDS-202ENST00000414306 STILQ15468 1287 aa18.71■□□□□ 0.59
SBDS-202ENST00000414306 SFMBT2Q5VUG0 894 aa18.71■□□□□ 0.59
SBDS-202ENST00000414306 NUP93Q8N1F7 819 aa18.71■□□□□ 0.59
SBDS-202ENST00000414306 ITFG1Q8TB96 612 aa18.71■□□□□ 0.59
SBDS-202ENST00000414306 SUSD6Q92537 303 aa18.71■□□□□ 0.59
SBDS-202ENST00000414306 NOCTQ9UK39 431 aaKnown RBP18.71■□□□□ 0.59
SBDS-202ENST00000414306 ASB3Q9Y575 518 aa18.71■□□□□ 0.59
SBDS-202ENST00000414306 A0A1W2PQJ5 194 aa18.7■□□□□ 0.58
SBDS-202ENST00000414306 A0A1W2PRU2 124 aa18.7■□□□□ 0.58
SBDS-202ENST00000414306 TNFRSF10BO14763 440 aa18.7■□□□□ 0.58
SBDS-202ENST00000414306 FSHRP23945 695 aa18.7■□□□□ 0.58
SBDS-202ENST00000414306 GABRR2P28476 465 aa18.7■□□□□ 0.58
SBDS-202ENST00000414306 PKDCCQ504Y2 493 aa18.7■□□□□ 0.58
SBDS-202ENST00000414306 CYP4A22Q5TCH4 519 aa18.7■□□□□ 0.58
SBDS-202ENST00000414306 LRRC3Q9BY71 257 aa18.7■□□□□ 0.58
SBDS-202ENST00000414306 WDR6Q9NNW5 1121 aaKnown RBP18.7■□□□□ 0.58
SBDS-202ENST00000414306 ST7Q9NRC1 585 aa18.7■□□□□ 0.58
SBDS-202ENST00000414306 SEPT11Q9NVA2 429 aaKnown RBP18.7■□□□□ 0.58
SBDS-202ENST00000414306 CAPN11Q9UMQ6 739 aa18.7■□□□□ 0.58
SBDS-202ENST00000414306 LUC7L2Q9Y383 392 aaKnown RBP18.7■□□□□ 0.58
SBDS-202ENST00000414306 MRPS23Q9Y3D9 190 aaKnown RBP18.7■□□□□ 0.58
SBDS-202ENST00000414306 ANAPC1Q9H1A4 1944 aa18.7■□□□□ 0.58
SBDS-202ENST00000414306 GOLGA6L3A6NEY3 463 aa18.69■□□□□ 0.58
SBDS-202ENST00000414306 XPO1O14980 1071 aaKnown RBP18.69■□□□□ 0.58
SBDS-202ENST00000414306 PAPLNO95428 1278 aa18.69■□□□□ 0.58
SBDS-202ENST00000414306 ADCY5O95622 1261 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms