RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 TBKBP1A7MCY6 615 aa17.95■□□□□ 0.46
PHRF1-202ENST00000413872 PSMC6P62333 389 aa17.95■□□□□ 0.46
PHRF1-202ENST00000413872 ABRAQ8N0Z2 381 aa17.95■□□□□ 0.46
PHRF1-202ENST00000413872 MRPL46Q9H2W6 279 aaKnown RBP17.95■□□□□ 0.46
PHRF1-202ENST00000413872 SLC12A8A0AV02 714 aa17.94■□□□□ 0.46
PHRF1-202ENST00000413872 SPATA21Q7Z572 469 aa17.94■□□□□ 0.46
PHRF1-202ENST00000413872 ZFPM1Q8IX07 1006 aa17.94■□□□□ 0.46
PHRF1-202ENST00000413872 EXD1Q8NHP7 514 aa17.94■□□□□ 0.46
PHRF1-202ENST00000413872 TBCBQ99426 244 aa17.94■□□□□ 0.46
PHRF1-202ENST00000413872 PSD3Q9NYI0 1048 aa17.94■□□□□ 0.46
PHRF1-202ENST00000413872 SYCP2LQ5T4T6 812 aa17.94■□□□□ 0.46
PHRF1-202ENST00000413872 ARMC6Q6NXE6 501 aa17.94■□□□□ 0.46
PHRF1-202ENST00000413872 VCPIP1Q96JH7 1222 aa17.94■□□□□ 0.46
PHRF1-202ENST00000413872 PNMA5Q96PV4 448 aa17.94■□□□□ 0.46
PHRF1-202ENST00000413872 ARL2BPQ9Y2Y0 163 aa17.94■□□□□ 0.46
PHRF1-202ENST00000413872 NRCAMQ92823 1304 aa17.94■□□□□ 0.46
PHRF1-202ENST00000413872 LGALS2P05162 132 aa17.94■□□□□ 0.46
PHRF1-202ENST00000413872 MAP4K3Q8IVH8 894 aa17.94■□□□□ 0.46
PHRF1-202ENST00000413872 TMEM134Q9H6X4 195 aa17.94■□□□□ 0.46
PHRF1-202ENST00000413872 CHST12Q9NRB3 414 aa17.94■□□□□ 0.46
PHRF1-202ENST00000413872 AP4E1Q9UPM8 1137 aa17.94■□□□□ 0.46
PHRF1-202ENST00000413872 PQBP1O60828 265 aaKnown RBP17.94■□□□□ 0.46
PHRF1-202ENST00000413872 RHOBTB1O94844 696 aa17.94■□□□□ 0.46
PHRF1-202ENST00000413872 CHRM3P20309 590 aa17.94■□□□□ 0.46
PHRF1-202ENST00000413872 GYS2P54840 703 aa17.94■□□□□ 0.46
PHRF1-202ENST00000413872 MAP3K7CLP57077 242 aa17.94■□□□□ 0.46
PHRF1-202ENST00000413872 AP2B1P63010 937 aa17.94■□□□□ 0.46
PHRF1-202ENST00000413872 PTGISQ16647 500 aa17.94■□□□□ 0.46
PHRF1-202ENST00000413872 CLEC16AQ2KHT3 1053 aa17.94■□□□□ 0.46
PHRF1-202ENST00000413872 COBLL1Q53SF7 1204 aa17.94■□□□□ 0.46
PHRF1-202ENST00000413872 DEFB128Q7Z7B8 93 aa17.94■□□□□ 0.46
PHRF1-202ENST00000413872 CYP2W1Q8TAV3 490 aa17.94■□□□□ 0.46
PHRF1-202ENST00000413872 RIN2Q8WYP3 895 aaPredicted RBP17.94■□□□□ 0.46
PHRF1-202ENST00000413872 PCMTD2Q9NV79 361 aa17.94■□□□□ 0.46
PHRF1-202ENST00000413872 RIC8BQ9NVN3 520 aa17.94■□□□□ 0.46
PHRF1-202ENST00000413872 GOLGA8RI6L899 631 aa17.93■□□□□ 0.46
PHRF1-202ENST00000413872 PMPCBO75439 489 aa17.93■□□□□ 0.46
PHRF1-202ENST00000413872 PPP1R37O75864 691 aa17.93■□□□□ 0.46
PHRF1-202ENST00000413872 PAEPP09466 180 aa17.93■□□□□ 0.46
PHRF1-202ENST00000413872 GHRP10912 638 aa17.93■□□□□ 0.46
PHRF1-202ENST00000413872 PAX3P23760 479 aa17.93■□□□□ 0.46
PHRF1-202ENST00000413872 TKTL1P51854 596 aa17.93■□□□□ 0.46
PHRF1-202ENST00000413872 EFEMP1Q12805 493 aa17.93■□□□□ 0.46
PHRF1-202ENST00000413872 BTG3Q14201 252 aaPredicted RBP17.93■□□□□ 0.46
PHRF1-202ENST00000413872 FAM83EQ2M2I3 478 aa17.93■□□□□ 0.46
PHRF1-202ENST00000413872 NFASCO94856 1347 aa17.93■□□□□ 0.46
PHRF1-202ENST00000413872 RNF103-CHMP3A0A140T963 221 aa17.93■□□□□ 0.46
PHRF1-202ENST00000413872 CASTOR2A6NHX0 329 aa17.93■□□□□ 0.46
PHRF1-202ENST00000413872 SOAT2O75908 522 aa17.93■□□□□ 0.46
PHRF1-202ENST00000413872 ILF2Q12905 390 aaKnown RBP17.93■□□□□ 0.46
PHRF1-202ENST00000413872 MAPK7Q13164 816 aa17.93■□□□□ 0.46
PHRF1-202ENST00000413872 CRY2Q49AN0 593 aa17.93■□□□□ 0.46
PHRF1-202ENST00000413872 ZNF467Q7Z7K2 595 aaPredicted RBP17.93■□□□□ 0.46
PHRF1-202ENST00000413872 TSPYL2Q9H2G4 693 aaPredicted RBP17.93■□□□□ 0.46
PHRF1-202ENST00000413872 CLCA2Q9UQC9 943 aa17.93■□□□□ 0.46
PHRF1-202ENST00000413872 SUPT3HB4E1H0 165 aa17.93■□□□□ 0.46
PHRF1-202ENST00000413872 RHOCP08134 193 aa17.93■□□□□ 0.46
PHRF1-202ENST00000413872 KCNJ1P48048 391 aa17.93■□□□□ 0.46
PHRF1-202ENST00000413872 NOGQ13253 232 aa17.93■□□□□ 0.46
PHRF1-202ENST00000413872 POP1Q99575 1024 aaKnown RBP17.93■□□□□ 0.46
PHRF1-202ENST00000413872 CCDC78A2IDD5 438 aa17.93■□□□□ 0.46
PHRF1-202ENST00000413872 IL10P22301 178 aa17.93■□□□□ 0.46
PHRF1-202ENST00000413872 ZNF268Q14587 947 aaPredicted RBP17.93■□□□□ 0.46
PHRF1-202ENST00000413872 TERF2Q15554 542 aa17.93■□□□□ 0.46
PHRF1-202ENST00000413872 KYNUQ16719 465 aa17.93■□□□□ 0.46
PHRF1-202ENST00000413872 LONRF1Q17RB8 773 aa17.93■□□□□ 0.46
PHRF1-202ENST00000413872 SPDYAQ5MJ70 313 aa17.93■□□□□ 0.46
PHRF1-202ENST00000413872 RMDN2Q96LZ7 410 aa17.93■□□□□ 0.46
PHRF1-202ENST00000413872 DRG1Q9Y295 367 aaKnown RBP17.93■□□□□ 0.46
PHRF1-202ENST00000413872 ADCYAP1R1P41586 468 aa17.92■□□□□ 0.46
PHRF1-202ENST00000413872 CTCFP49711 727 aaPredicted RBP17.92■□□□□ 0.46
PHRF1-202ENST00000413872 FBXW4P57775 412 aa17.92■□□□□ 0.46
PHRF1-202ENST00000413872 CELF3Q5SZQ8 465 aaKnown RBP17.92■□□□□ 0.46
PHRF1-202ENST00000413872 CHADLQ6NUI6 762 aa17.92■□□□□ 0.46
PHRF1-202ENST00000413872 OOSP2Q86WS3 158 aa17.92■□□□□ 0.46
PHRF1-202ENST00000413872 SMARCD1Q96GM5 515 aa17.92■□□□□ 0.46
PHRF1-202ENST00000413872 ELOVL4Q9GZR5 314 aa17.92■□□□□ 0.46
PHRF1-202ENST00000413872 ING2Q9H160 280 aa17.92■□□□□ 0.46
PHRF1-202ENST00000413872 ETNK1Q9HBU6 452 aa17.92■□□□□ 0.46
PHRF1-202ENST00000413872 CYP39A1Q9NYL5 469 aa17.92■□□□□ 0.46
PHRF1-202ENST00000413872 USP18Q9UMW8 372 aa17.92■□□□□ 0.46
PHRF1-202ENST00000413872 RTN3O95197 1032 aaPredicted RBP17.92■□□□□ 0.46
PHRF1-202ENST00000413872 RRM1P23921 792 aa17.92■□□□□ 0.46
PHRF1-202ENST00000413872 MDH1P40925 334 aaKnown RBP17.92■□□□□ 0.46
PHRF1-202ENST00000413872 ST13P4Q8IZP2 240 aaPredicted RBP17.92■□□□□ 0.46
PHRF1-202ENST00000413872 TMEM86AQ8N2M4 240 aa17.92■□□□□ 0.46
PHRF1-202ENST00000413872 CHCHD3Q9NX63 227 aaKnown RBP17.92■□□□□ 0.46
PHRF1-202ENST00000413872 UBA1P22314 1058 aaKnown RBP17.92■□□□□ 0.46
PHRF1-202ENST00000413872 CCR1P32246 355 aa17.92■□□□□ 0.46
PHRF1-202ENST00000413872 NAA30Q147X3 362 aaPredicted RBP17.92■□□□□ 0.46
PHRF1-202ENST00000413872 HIST2H2ACQ16777 129 aaPredicted RBP17.92■□□□□ 0.46
PHRF1-202ENST00000413872 HIST2H2AA3Q6FI13 130 aa17.92■□□□□ 0.46
PHRF1-202ENST00000413872 UXTQ9UBK9 157 aaPredicted RBP17.92■□□□□ 0.46
PHRF1-202ENST00000413872 CDY2AQ9Y6F7 541 aa17.92■□□□□ 0.46
PHRF1-202ENST00000413872 CDY1Q9Y6F8 540 aa17.92■□□□□ 0.46
PHRF1-202ENST00000413872 ORC1Q13415 861 aa17.92■□□□□ 0.46
PHRF1-202ENST00000413872 RGMBQ6NW40 437 aa17.92■□□□□ 0.46
PHRF1-202ENST00000413872 TRIML2Q8N7C3 387 aa17.92■□□□□ 0.46
PHRF1-202ENST00000413872 PIP4K2CQ8TBX8 421 aa17.92■□□□□ 0.46
PHRF1-202ENST00000413872 DDI1Q8WTU0 396 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms